RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 HDHD3Q9BSH5 251 aaPredicted RBP20.63■□□□□ 0.89
LDLRAD3-203ENST00000528989 SRRQ9GZT4 340 aa20.63■□□□□ 0.89
LDLRAD3-203ENST00000528989 HSF4Q9ULV5 492 aa20.63■□□□□ 0.89
LDLRAD3-203ENST00000528989 ITPR2Q14571 2701 aa20.63■□□□□ 0.89
LDLRAD3-203ENST00000528989 TNFRSF13BO14836 293 aaPredicted RBP20.62■□□□□ 0.89
LDLRAD3-203ENST00000528989 MNDAP41218 407 aa20.62■□□□□ 0.89
LDLRAD3-203ENST00000528989 PYHIN1Q6K0P9 492 aa20.62■□□□□ 0.89
LDLRAD3-203ENST00000528989 PEG10Q86TG7 708 aaKnown RBP20.62■□□□□ 0.89
LDLRAD3-203ENST00000528989 ASCC1Q8N9N2 400 aaKnown RBP20.62■□□□□ 0.89
LDLRAD3-203ENST00000528989 NUDCD2Q8WVJ2 157 aa20.62■□□□□ 0.89
LDLRAD3-203ENST00000528989 SHARPINQ9H0F6 387 aa20.62■□□□□ 0.89
LDLRAD3-203ENST00000528989 NAV2Q8IVL1 2488 aa20.62■□□□□ 0.89
LDLRAD3-203ENST00000528989 MEIS3P1A6NDR6 274 aa20.62■□□□□ 0.89
LDLRAD3-203ENST00000528989 TMPRSS2O15393 492 aa20.62■□□□□ 0.89
LDLRAD3-203ENST00000528989 NR4A2P43354 598 aa20.62■□□□□ 0.89
LDLRAD3-203ENST00000528989 DGCR2P98153 550 aa20.62■□□□□ 0.89
LDLRAD3-203ENST00000528989 PAN3Q58A45 887 aaKnown RBP20.62■□□□□ 0.89
LDLRAD3-203ENST00000528989 FGFRL1Q8N441 504 aa20.62■□□□□ 0.89
LDLRAD3-203ENST00000528989 OR4S1Q8NGB4 309 aa20.62■□□□□ 0.89
LDLRAD3-203ENST00000528989 GAFA1Q96PS6 74 aa20.62■□□□□ 0.89
LDLRAD3-203ENST00000528989 AK3Q9UIJ7 227 aa20.62■□□□□ 0.89
LDLRAD3-203ENST00000528989 ZNF737O75373 536 aa20.61■□□□□ 0.89
LDLRAD3-203ENST00000528989 FCER2P06734 321 aa20.61■□□□□ 0.89
LDLRAD3-203ENST00000528989 HACD4Q5VWC8 232 aa20.61■□□□□ 0.89
LDLRAD3-203ENST00000528989 ZNF788Q6ZQV5 615 aa20.61■□□□□ 0.89
LDLRAD3-203ENST00000528989 GSX2Q9BZM3 304 aa20.61■□□□□ 0.89
LDLRAD3-203ENST00000528989 NARFLQ9H6Q4 476 aa20.61■□□□□ 0.89
LDLRAD3-203ENST00000528989 MCRIP1C9JLW8 97 aa20.6■□□□□ 0.89
LDLRAD3-203ENST00000528989 FCN3O75636 299 aa20.6■□□□□ 0.89
LDLRAD3-203ENST00000528989 PAX1P15863 534 aa20.6■□□□□ 0.89
LDLRAD3-203ENST00000528989 MDH2P40926 338 aaKnown RBP20.6■□□□□ 0.89
LDLRAD3-203ENST00000528989 ATXN7L3Q14CW9 347 aaPredicted RBP20.6■□□□□ 0.89
LDLRAD3-203ENST00000528989 NEK7Q8TDX7 302 aa20.6■□□□□ 0.89
LDLRAD3-203ENST00000528989 ANKRD17O75179 2603 aaKnown RBP20.6■□□□□ 0.89
LDLRAD3-203ENST00000528989 MELTFP08582 738 aa20.6■□□□□ 0.89
LDLRAD3-203ENST00000528989 ZNF846Q147U1 533 aa20.6■□□□□ 0.89
LDLRAD3-203ENST00000528989 BAK1Q16611 211 aa20.6■□□□□ 0.89
LDLRAD3-203ENST00000528989 OR52I2Q8NH67 350 aa20.6■□□□□ 0.89
LDLRAD3-203ENST00000528989 RAB1CQ92928 201 aa20.6■□□□□ 0.89
LDLRAD3-203ENST00000528989 SDSLQ96GA7 329 aa20.6■□□□□ 0.89
LDLRAD3-203ENST00000528989 SPACA1Q9HBV2 294 aa20.6■□□□□ 0.89
LDLRAD3-203ENST00000528989 LANCL1O43813 399 aa20.59■□□□□ 0.89
LDLRAD3-203ENST00000528989 SSX5O60225 188 aa20.59■□□□□ 0.89
LDLRAD3-203ENST00000528989 GSTP1P09211 210 aaKnown RBP20.59■□□□□ 0.89
LDLRAD3-203ENST00000528989 PRSS3P35030 304 aa20.59■□□□□ 0.89
LDLRAD3-203ENST00000528989 OR3A1P47881 315 aa20.59■□□□□ 0.89
LDLRAD3-203ENST00000528989 PITPNAQ00169 270 aa20.59■□□□□ 0.89
LDLRAD3-203ENST00000528989 ATPAF1Q5TC12 328 aaPredicted RBP20.59■□□□□ 0.89
LDLRAD3-203ENST00000528989 BAIAP2L2Q6UXY1 529 aa20.59■□□□□ 0.89
LDLRAD3-203ENST00000528989 Q8N402 240 aa20.59■□□□□ 0.89
LDLRAD3-203ENST00000528989 PLPPR1Q8TBJ4 325 aa20.59■□□□□ 0.89
LDLRAD3-203ENST00000528989 TIMD4Q96H15 378 aa20.59■□□□□ 0.89
LDLRAD3-203ENST00000528989 WDR12Q9GZL7 423 aaKnown RBP20.59■□□□□ 0.89
LDLRAD3-203ENST00000528989 ZNF665Q9H7R5 613 aa20.59■□□□□ 0.89
LDLRAD3-203ENST00000528989 CTSZQ9UBR2 303 aa20.59■□□□□ 0.89
LDLRAD3-203ENST00000528989 KLK11Q9UBX7 282 aa20.59■□□□□ 0.89
LDLRAD3-203ENST00000528989 ADAM20O43506 726 aa20.58■□□□□ 0.89
LDLRAD3-203ENST00000528989 CD3GP09693 182 aa20.58■□□□□ 0.89
LDLRAD3-203ENST00000528989 DNASE1P24855 282 aa20.58■□□□□ 0.89
LDLRAD3-203ENST00000528989 GPR6P46095 362 aaPredicted RBP20.58■□□□□ 0.89
LDLRAD3-203ENST00000528989 PPP5CP53041 499 aa20.58■□□□□ 0.89
LDLRAD3-203ENST00000528989 ARFRP1Q13795 201 aa20.58■□□□□ 0.89
LDLRAD3-203ENST00000528989 BPESC1Q9GZL8 116 aa20.58■□□□□ 0.89
LDLRAD3-203ENST00000528989 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP20.58■□□□□ 0.89
LDLRAD3-203ENST00000528989 SERPINE3A8MV23 424 aa20.58■□□□□ 0.88
LDLRAD3-203ENST00000528989 AESQ08117 197 aa20.58■□□□□ 0.88
LDLRAD3-203ENST00000528989 DEFB113Q30KQ7 82 aa20.58■□□□□ 0.88
LDLRAD3-203ENST00000528989 Q6ZPA2 131 aa20.58■□□□□ 0.88
LDLRAD3-203ENST00000528989 ZNF561Q8N587 486 aa20.58■□□□□ 0.88
LDLRAD3-203ENST00000528989 TPRX1Q8N7U7 411 aa20.58■□□□□ 0.88
LDLRAD3-203ENST00000528989 SEBOXQ9HB31 216 aaPredicted RBP20.58■□□□□ 0.88
LDLRAD3-203ENST00000528989 MYOZ1Q9NP98 299 aaPredicted RBP20.58■□□□□ 0.88
LDLRAD3-203ENST00000528989 ZNF230Q9UIE0 474 aaPredicted RBP20.58■□□□□ 0.88
LDLRAD3-203ENST00000528989 CEACAM18A8MTB9 384 aa20.57■□□□□ 0.88
LDLRAD3-203ENST00000528989 K7N7A8 449 aa20.57■□□□□ 0.88
LDLRAD3-203ENST00000528989 SIGLEC5O15389 551 aa20.57■□□□□ 0.88
LDLRAD3-203ENST00000528989 TK1P04183 234 aa20.57■□□□□ 0.88
LDLRAD3-203ENST00000528989 PTBP1P26599 531 aaKnown RBP eCLIP20.57■□□□□ 0.88
LDLRAD3-203ENST00000528989 GNG2P59768 71 aa20.57■□□□□ 0.88
LDLRAD3-203ENST00000528989 GRK1Q15835 563 aa20.57■□□□□ 0.88
LDLRAD3-203ENST00000528989 GVQW1Q8N7I0 195 aa20.57■□□□□ 0.88
LDLRAD3-203ENST00000528989 TMEM185AQ8NFB2 350 aa20.57■□□□□ 0.88
LDLRAD3-203ENST00000528989 LURAP1Q96LR2 239 aa20.57■□□□□ 0.88
LDLRAD3-203ENST00000528989 BARX1Q9HBU1 254 aaPredicted RBP20.57■□□□□ 0.88
LDLRAD3-203ENST00000528989 ETAA1Q9NY74 926 aa20.57■□□□□ 0.88
LDLRAD3-203ENST00000528989 MEX3AA1L020 520 aaKnown RBP20.56■□□□□ 0.88
LDLRAD3-203ENST00000528989 FSTL3O95633 263 aa20.56■□□□□ 0.88
LDLRAD3-203ENST00000528989 PDLIM4P50479 330 aa20.56■□□□□ 0.88
LDLRAD3-203ENST00000528989 IL13RA1P78552 427 aa20.56■□□□□ 0.88
LDLRAD3-203ENST00000528989 MAFIPQ8WZ33 124 aa20.56■□□□□ 0.88
LDLRAD3-203ENST00000528989 SNX22Q96L94 193 aa20.56■□□□□ 0.88
LDLRAD3-203ENST00000528989 CMSS1Q9BQ75 279 aaKnown RBP20.56■□□□□ 0.88
LDLRAD3-203ENST00000528989 TRAV39A0A0B4J263 110 aa20.56■□□□□ 0.88
LDLRAD3-203ENST00000528989 CTDSPLO15194 276 aa20.56■□□□□ 0.88
LDLRAD3-203ENST00000528989 TPPPO94811 219 aa20.56■□□□□ 0.88
LDLRAD3-203ENST00000528989 GIFP27352 417 aa20.56■□□□□ 0.88
LDLRAD3-203ENST00000528989 TRAPPC6BQ86SZ2 158 aa20.56■□□□□ 0.88
LDLRAD3-203ENST00000528989 GPX8Q8TED1 209 aa20.56■□□□□ 0.88
LDLRAD3-203ENST00000528989 SMIM4Q8WVI0 70 aa20.56■□□□□ 0.88
LDLRAD3-203ENST00000528989 FCAMRQ8WWV6 532 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms