RNA–Protein interactions for RNA: ENST00000528563.5

HIF3A-211, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2

Gene HIF3A, Length 1,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-211ENST00000528563 ACSM3Q53FZ2 586 aa13.74□□□□□ -0.21
HIF3A-211ENST00000528563 C16orf87Q6PH81 154 aa13.74□□□□□ -0.21
HIF3A-211ENST00000528563 TMEM86BQ8N661 226 aa13.74□□□□□ -0.21
HIF3A-211ENST00000528563 TPRX1Q8N7U7 411 aa13.74□□□□□ -0.21
HIF3A-211ENST00000528563 GCDHQ92947 438 aaPredicted RBP13.74□□□□□ -0.21
HIF3A-211ENST00000528563 AJUBAQ96IF1 538 aa13.74□□□□□ -0.21
HIF3A-211ENST00000528563 NR1H4Q96RI1 486 aaPredicted RBP13.74□□□□□ -0.21
HIF3A-211ENST00000528563 METTL9Q9H1A3 318 aa13.74□□□□□ -0.21
HIF3A-211ENST00000528563 ISYNA1Q9NPH2 558 aa13.74□□□□□ -0.21
HIF3A-211ENST00000528563 FAM96BQ9Y3D0 163 aa13.74□□□□□ -0.21
HIF3A-211ENST00000528563 LINC00312Q9Y6C7 94 aa13.74□□□□□ -0.21
HIF3A-211ENST00000528563 DENRO43583 198 aaKnown RBP13.73□□□□□ -0.21
HIF3A-211ENST00000528563 SC5DO75845 299 aa13.73□□□□□ -0.21
HIF3A-211ENST00000528563 HTR3BO95264 441 aa13.73□□□□□ -0.21
HIF3A-211ENST00000528563 CSN2P05814 226 aa13.73□□□□□ -0.21
HIF3A-211ENST00000528563 MAPK3P27361 379 aaPredicted RBP13.73□□□□□ -0.21
HIF3A-211ENST00000528563 SAA4P35542 130 aa13.73□□□□□ -0.21
HIF3A-211ENST00000528563 COMPP49747 757 aaPredicted RBP13.73□□□□□ -0.21
HIF3A-211ENST00000528563 MIDNQ504T8 468 aa13.73□□□□□ -0.21
HIF3A-211ENST00000528563 LDLRAD3Q86YD5 345 aa13.73□□□□□ -0.21
HIF3A-211ENST00000528563 SSMEM1Q8WWF3 244 aa13.73□□□□□ -0.21
HIF3A-211ENST00000528563 CCDC90BQ9GZT6 254 aa13.73□□□□□ -0.21
HIF3A-211ENST00000528563 FAM192AQ9GZU8 254 aa13.73□□□□□ -0.21
HIF3A-211ENST00000528563 RRP15Q9Y3B9 282 aaKnown RBP13.73□□□□□ -0.21
HIF3A-211ENST00000528563 POMT1Q9Y6A1 747 aa13.73□□□□□ -0.21
HIF3A-211ENST00000528563 KIAA2026Q5HYC2 2103 aa13.72□□□□□ -0.21
HIF3A-211ENST00000528563 TRAV24A0A0B4J272 114 aa13.72□□□□□ -0.21
HIF3A-211ENST00000528563 MEIOCA2RUB1 952 aa13.72□□□□□ -0.21
HIF3A-211ENST00000528563 MAS1P04201 325 aa13.72□□□□□ -0.21
HIF3A-211ENST00000528563 IER3P46695 156 aa13.72□□□□□ -0.21
HIF3A-211ENST00000528563 GLIPR1P48060 266 aa13.72□□□□□ -0.21
HIF3A-211ENST00000528563 ACTG1P63261 375 aa13.72□□□□□ -0.21
HIF3A-211ENST00000528563 AESQ08117 197 aa13.72□□□□□ -0.21
HIF3A-211ENST00000528563 IL13RA2Q14627 380 aa13.72□□□□□ -0.21
HIF3A-211ENST00000528563 PIGYQ3MUY2 71 aa13.72□□□□□ -0.21
HIF3A-211ENST00000528563 NHLRC3Q5JS37 347 aa13.72□□□□□ -0.21
HIF3A-211ENST00000528563 CORO2AQ92828 525 aa13.72□□□□□ -0.21
HIF3A-211ENST00000528563 ZNF714Q96N38 554 aa13.72□□□□□ -0.21
HIF3A-211ENST00000528563 TMED9Q9BVK6 235 aa13.72□□□□□ -0.21
HIF3A-211ENST00000528563 PPA2Q9H2U2 334 aa13.72□□□□□ -0.21
HIF3A-211ENST00000528563 FUOMA2VDF0 154 aa13.71□□□□□ -0.21
HIF3A-211ENST00000528563 MEGF11A6BM72 1044 aa13.71□□□□□ -0.21
HIF3A-211ENST00000528563 ZNF780AO75290 641 aaPredicted RBP13.71□□□□□ -0.21
HIF3A-211ENST00000528563 FBP1P09467 338 aa13.71□□□□□ -0.21
HIF3A-211ENST00000528563 IGHV1-8P0DP01 117 aa13.71□□□□□ -0.21
HIF3A-211ENST00000528563 HKR1P10072 659 aa13.71□□□□□ -0.21
HIF3A-211ENST00000528563 MAP2K4P45985 399 aa13.71□□□□□ -0.21
HIF3A-211ENST00000528563 FAM27D1Q5T7N8 215 aa13.71□□□□□ -0.21
HIF3A-211ENST00000528563 LIPKQ5VXJ0 399 aa13.71□□□□□ -0.21
HIF3A-211ENST00000528563 OSR2Q8N2R0 312 aa13.71□□□□□ -0.21
HIF3A-211ENST00000528563 COQ2Q96H96 371 aa13.71□□□□□ -0.21
HIF3A-211ENST00000528563 S100A13Q99584 98 aa13.71□□□□□ -0.21
HIF3A-211ENST00000528563 CHIAQ9BZP6 476 aa13.71□□□□□ -0.21
HIF3A-211ENST00000528563 PPIL3Q9H2H8 161 aaKnown RBP13.71□□□□□ -0.21
HIF3A-211ENST00000528563 IFT22Q9H7X7 185 aa13.71□□□□□ -0.21
HIF3A-211ENST00000528563 PCDHB16Q9NRJ7 776 aa13.71□□□□□ -0.21
HIF3A-211ENST00000528563 BLOC1S6Q9UL45 172 aa13.71□□□□□ -0.21
HIF3A-211ENST00000528563 ST3GAL6Q9Y274 331 aa13.71□□□□□ -0.21
HIF3A-211ENST00000528563 UBE2J1Q9Y385 318 aaPredicted RBP13.71□□□□□ -0.21
HIF3A-211ENST00000528563 IGHV4-59P01825 116 aa13.7□□□□□ -0.22
HIF3A-211ENST00000528563 CSTBP04080 98 aaKnown RBP13.7□□□□□ -0.22
HIF3A-211ENST00000528563 HSMCR30P0CW71 290 aa13.7□□□□□ -0.22
HIF3A-211ENST00000528563 CD37P11049 281 aa13.7□□□□□ -0.22
HIF3A-211ENST00000528563 CPEP16870 476 aa13.7□□□□□ -0.22
HIF3A-211ENST00000528563 RBM11P57052 281 aaKnown RBP13.7□□□□□ -0.22
HIF3A-211ENST00000528563 MLLT11Q13015 90 aaPredicted RBP13.7□□□□□ -0.22
HIF3A-211ENST00000528563 GPR176Q14439 515 aa13.7□□□□□ -0.22
HIF3A-211ENST00000528563 SLC22A6Q4U2R8 563 aa13.7□□□□□ -0.22
HIF3A-211ENST00000528563 ZNF782Q6ZMW2 699 aaPredicted RBP13.7□□□□□ -0.22
HIF3A-211ENST00000528563 CEACAM19Q7Z692 300 aa13.7□□□□□ -0.22
HIF3A-211ENST00000528563 JAGN1Q8N5M9 183 aa13.7□□□□□ -0.22
HIF3A-211ENST00000528563 C17orf50Q8WW18 174 aa13.7□□□□□ -0.22
HIF3A-211ENST00000528563 UFD1Q92890 307 aa13.7□□□□□ -0.22
HIF3A-211ENST00000528563 MUL1Q969V5 352 aa13.7□□□□□ -0.22
HIF3A-211ENST00000528563 MGLLQ99685 303 aa13.7□□□□□ -0.22
HIF3A-211ENST00000528563 NCOR1P1Q9H4R4 102 aa13.7□□□□□ -0.22
HIF3A-211ENST00000528563 ZNRD1Q9P1U0 126 aa13.7□□□□□ -0.22
HIF3A-211ENST00000528563 MRPS28Q9Y2Q9 187 aaKnown RBP13.7□□□□□ -0.22
HIF3A-211ENST00000528563 ODAMA1E959 279 aa13.69□□□□□ -0.22
HIF3A-211ENST00000528563 SRMP19623 302 aa13.69□□□□□ -0.22
HIF3A-211ENST00000528563 TBCEQ15813 527 aaPredicted RBP13.69□□□□□ -0.22
HIF3A-211ENST00000528563 PAN3Q58A45 887 aaKnown RBP13.69□□□□□ -0.22
HIF3A-211ENST00000528563 KRBOX4Q5JUW0 171 aa13.69□□□□□ -0.22
HIF3A-211ENST00000528563 TMEM91Q6ZNR0 172 aa13.69□□□□□ -0.22
HIF3A-211ENST00000528563 LRRTM1Q86UE6 522 aa13.69□□□□□ -0.22
HIF3A-211ENST00000528563 OR11H6Q8NGC7 330 aa13.69□□□□□ -0.22
HIF3A-211ENST00000528563 OR4D6Q8NGJ1 314 aa13.69□□□□□ -0.22
HIF3A-211ENST00000528563 PHYHIPQ92561 330 aa13.69□□□□□ -0.22
HIF3A-211ENST00000528563 TMEM203Q969S6 136 aa13.69□□□□□ -0.22
HIF3A-211ENST00000528563 UQCC2Q9BRT2 126 aa13.69□□□□□ -0.22
HIF3A-211ENST00000528563 MEGF9Q9H1U4 602 aa13.69□□□□□ -0.22
HIF3A-211ENST00000528563 Q9H521 79 aa13.69□□□□□ -0.22
HIF3A-211ENST00000528563 TNFRSF19Q9NS68 423 aa13.69□□□□□ -0.22
HIF3A-211ENST00000528563 TAS2R3Q9NYW6 316 aa13.69□□□□□ -0.22
HIF3A-211ENST00000528563 ZNF581Q9P0T4 197 aa13.69□□□□□ -0.22
HIF3A-211ENST00000528563 TRGV10A0A0A0MS01 117 aa13.68□□□□□ -0.22
HIF3A-211ENST00000528563 A0A1W2PP11 408 aa13.68□□□□□ -0.22
HIF3A-211ENST00000528563 FAM181BA6NEQ2 426 aa13.68□□□□□ -0.22
HIF3A-211ENST00000528563 FAM90A8PA6NJQ4 464 aa13.68□□□□□ -0.22
HIF3A-211ENST00000528563 GEMIN2O14893 280 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms