RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 NIT1Q86X76 327 aa4.22□□□□□ -1.73
PCF11-202ENST00000528336 PRR22Q8IZ63 422 aa4.22□□□□□ -1.73
PCF11-202ENST00000528336 STK40Q8N2I9 435 aa4.22□□□□□ -1.73
PCF11-202ENST00000528336 ATPAF2Q8N5M1 289 aa4.22□□□□□ -1.73
PCF11-202ENST00000528336 C12orf29Q8N999 325 aa4.22□□□□□ -1.73
PCF11-202ENST00000528336 OR8G5Q8NG78 346 aa4.22□□□□□ -1.73
PCF11-202ENST00000528336 OR10X1Q8NGY0 326 aa4.22□□□□□ -1.73
PCF11-202ENST00000528336 C16orf78Q8WTQ4 265 aa4.22□□□□□ -1.73
PCF11-202ENST00000528336 CASTOR1Q8WTX7 329 aa4.22□□□□□ -1.73
PCF11-202ENST00000528336 FGF14Q92915 247 aa4.22□□□□□ -1.73
PCF11-202ENST00000528336 FGGYQ96C11 551 aa4.22□□□□□ -1.73
PCF11-202ENST00000528336 OR2V2Q96R30 315 aa4.22□□□□□ -1.73
PCF11-202ENST00000528336 GABRG3Q99928 467 aa4.22□□□□□ -1.73
PCF11-202ENST00000528336 RARRES2Q99969 163 aa4.22□□□□□ -1.73
PCF11-202ENST00000528336 TMEM208Q9BTX3 173 aa4.22□□□□□ -1.73
PCF11-202ENST00000528336 TM2D1Q9BX74 207 aa4.22□□□□□ -1.73
PCF11-202ENST00000528336 CAB39LQ9H9S4 337 aa4.22□□□□□ -1.73
PCF11-202ENST00000528336 UGT1A7Q9HAW7 530 aa4.22□□□□□ -1.73
PCF11-202ENST00000528336 DMAC2Q9NW81 257 aa4.22□□□□□ -1.73
PCF11-202ENST00000528336 CD84Q9UIB8 345 aa4.22□□□□□ -1.73
PCF11-202ENST00000528336 ZNF391Q9UJN7 358 aa4.22□□□□□ -1.73
PCF11-202ENST00000528336 MMP17Q9ULZ9 603 aa4.22□□□□□ -1.73
PCF11-202ENST00000528336 DENND4AQ7Z401 1863 aa4.22□□□□□ -1.73
PCF11-202ENST00000528336 CHD7Q9P2D1 2997 aa4.21□□□□□ -1.74
PCF11-202ENST00000528336 PHF3Q92576 2039 aaKnown RBP4.21□□□□□ -1.74
PCF11-202ENST00000528336 IGHV2OR16-5A0A0B4J2B6 119 aa4.21□□□□□ -1.74
PCF11-202ENST00000528336 SMIM9A6NGZ8 99 aa4.21□□□□□ -1.74
PCF11-202ENST00000528336 A6NIZ1 184 aa4.21□□□□□ -1.74
PCF11-202ENST00000528336 FAM166BA8MTA8 275 aa4.21□□□□□ -1.74
PCF11-202ENST00000528336 C5orf67F2Z3F1 127 aa4.21□□□□□ -1.74
PCF11-202ENST00000528336 K7ENP7 123 aa4.21□□□□□ -1.74
PCF11-202ENST00000528336 KCNK1O00180 336 aa4.21□□□□□ -1.74
PCF11-202ENST00000528336 TAAR5O14804 337 aa4.21□□□□□ -1.74
PCF11-202ENST00000528336 NDUFA2O43678 99 aa4.21□□□□□ -1.74
PCF11-202ENST00000528336 RAD1O60671 282 aa4.21□□□□□ -1.74
PCF11-202ENST00000528336 SCRG1O75711 98 aa4.21□□□□□ -1.74
PCF11-202ENST00000528336 LY6G6DO95868 133 aa4.21□□□□□ -1.74
PCF11-202ENST00000528336 FOLR1P15328 257 aa4.21□□□□□ -1.74
PCF11-202ENST00000528336 CRABP2P29373 138 aa4.21□□□□□ -1.74
PCF11-202ENST00000528336 CEACAM6P40199 344 aa4.21□□□□□ -1.74
PCF11-202ENST00000528336 GLP1RP43220 463 aa4.21□□□□□ -1.74
PCF11-202ENST00000528336 GPM6AP51674 278 aa4.21□□□□□ -1.74
PCF11-202ENST00000528336 OR12D2P58182 307 aa4.21□□□□□ -1.74
PCF11-202ENST00000528336 RPL19P84098 196 aaKnown RBP4.21□□□□□ -1.74
PCF11-202ENST00000528336 TFAMQ00059 246 aaKnown RBP4.21□□□□□ -1.74
PCF11-202ENST00000528336 ZNF92Q03936 586 aa4.21□□□□□ -1.74
PCF11-202ENST00000528336 OR2F1Q13607 317 aa4.21□□□□□ -1.74
PCF11-202ENST00000528336 C4orf26Q17RF5 130 aa4.21□□□□□ -1.74
PCF11-202ENST00000528336 CEACAM21Q3KPI0 293 aa4.21□□□□□ -1.74
PCF11-202ENST00000528336 SLC25A35Q3KQZ1 300 aa4.21□□□□□ -1.74
PCF11-202ENST00000528336 NPSR1Q6W5P4 371 aa4.21□□□□□ -1.74
PCF11-202ENST00000528336 THOC6Q86W42 341 aaKnown RBP4.21□□□□□ -1.74
PCF11-202ENST00000528336 OR6V1Q8N148 313 aa4.21□□□□□ -1.74
PCF11-202ENST00000528336 OR4K17Q8NGC6 315 aa4.21□□□□□ -1.74
PCF11-202ENST00000528336 OR10R2Q8NGX6 335 aa4.21□□□□□ -1.74
PCF11-202ENST00000528336 OR6K3Q8NGY3 331 aa4.21□□□□□ -1.74
PCF11-202ENST00000528336 ZNF564Q8TBZ8 553 aaPredicted RBP4.21□□□□□ -1.74
PCF11-202ENST00000528336 ARPC1AQ92747 370 aa4.21□□□□□ -1.74
PCF11-202ENST00000528336 OR10C1Q96KK4 312 aa4.21□□□□□ -1.74
PCF11-202ENST00000528336 C9orf85Q96MD7 179 aa4.21□□□□□ -1.74
PCF11-202ENST00000528336 OR5M11Q96RB7 305 aa4.21□□□□□ -1.74
PCF11-202ENST00000528336 VAT1Q99536 393 aa4.21□□□□□ -1.74
PCF11-202ENST00000528336 C20orf144Q9BQM9 153 aa4.21□□□□□ -1.74
PCF11-202ENST00000528336 CXCL16Q9H2A7 254 aa4.21□□□□□ -1.74
PCF11-202ENST00000528336 SPRR3Q9UBC9 169 aa4.21□□□□□ -1.74
PCF11-202ENST00000528336 SLC2A6Q9UGQ3 507 aa4.21□□□□□ -1.74
PCF11-202ENST00000528336 RWDD2AQ9UIY3 292 aa4.21□□□□□ -1.74
PCF11-202ENST00000528336 FARSAQ9Y285 508 aaKnown RBP4.21□□□□□ -1.74
PCF11-202ENST00000528336 MYH11P35749 1972 aa4.21□□□□□ -1.74
PCF11-202ENST00000528336 MTCL1Q9Y4B5 1905 aaKnown RBP4.21□□□□□ -1.74
PCF11-202ENST00000528336 IGKV1D-8A0A087WSZ0 117 aa4.2□□□□□ -1.74
PCF11-202ENST00000528336 EFCAB10A6NFE3 127 aa4.2□□□□□ -1.74
PCF11-202ENST00000528336 EFCAB9A8MZ26 197 aa4.2□□□□□ -1.74
PCF11-202ENST00000528336 DISC1C4P0D8 188 aa4.2□□□□□ -1.74
PCF11-202ENST00000528336 C15orf65H3BRN8 121 aa4.2□□□□□ -1.74
PCF11-202ENST00000528336 PSMD12O00232 456 aaPredicted RBP4.2□□□□□ -1.74
PCF11-202ENST00000528336 GABRPO00591 440 aa4.2□□□□□ -1.74
PCF11-202ENST00000528336 CDX4O14627 284 aaPredicted RBP4.2□□□□□ -1.74
PCF11-202ENST00000528336 NUPL2O15504 423 aaKnown RBP4.2□□□□□ -1.74
PCF11-202ENST00000528336 MBTPS2O43462 519 aa4.2□□□□□ -1.74
PCF11-202ENST00000528336 CST2P09228 141 aa4.2□□□□□ -1.74
PCF11-202ENST00000528336 ALOX5APP20292 161 aa4.2□□□□□ -1.74
PCF11-202ENST00000528336 SLC2A5P22732 501 aa4.2□□□□□ -1.74
PCF11-202ENST00000528336 F8A1P23610 371 aa4.2□□□□□ -1.74
PCF11-202ENST00000528336 HTR1EP28566 365 aa4.2□□□□□ -1.74
PCF11-202ENST00000528336 PMELP40967 661 aa4.2□□□□□ -1.74
PCF11-202ENST00000528336 GALR1P47211 349 aa4.2□□□□□ -1.74
PCF11-202ENST00000528336 OR1D4P47884 311 aa4.2□□□□□ -1.74
PCF11-202ENST00000528336 MEOX2P50222 304 aa4.2□□□□□ -1.74
PCF11-202ENST00000528336 AP1S2P56377 157 aa4.2□□□□□ -1.74
PCF11-202ENST00000528336 RAB38P57729 211 aa4.2□□□□□ -1.74
PCF11-202ENST00000528336 CLINT1Q14677 625 aa4.2□□□□□ -1.74
PCF11-202ENST00000528336 NSUN5P1Q3KNT7 163 aa4.2□□□□□ -1.74
PCF11-202ENST00000528336 KLF17Q5JT82 389 aaPredicted RBP4.2□□□□□ -1.74
PCF11-202ENST00000528336 LRRC25Q8N386 305 aaPredicted RBP4.2□□□□□ -1.74
PCF11-202ENST00000528336 TMEM35BQ8NCS4 154 aa4.2□□□□□ -1.74
PCF11-202ENST00000528336 OR10W1Q8NGF6 305 aa4.2□□□□□ -1.74
PCF11-202ENST00000528336 FGF11Q92914 225 aa4.2□□□□□ -1.74
PCF11-202ENST00000528336 TMEM54Q969K7 222 aa4.2□□□□□ -1.74
PCF11-202ENST00000528336 ZMYND19Q96E35 227 aaPredicted RBP4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms