RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 GUCA2BQ16661 112 aa15.06■□□□□ 0
USH1C-205ENST00000527020 CLEC9AQ6UXN8 241 aa15.06■□□□□ 0
USH1C-205ENST00000527020 IL34Q6ZMJ4 242 aa15.06■□□□□ 0
USH1C-205ENST00000527020 ZFP62Q8NB50 900 aaPredicted RBP15.06■□□□□ 0
USH1C-205ENST00000527020 OR52M1Q8NGK5 317 aa15.06■□□□□ 0
USH1C-205ENST00000527020 SYT3Q9BQG1 590 aa15.06■□□□□ 0
USH1C-205ENST00000527020 SMIM3Q9BZL3 60 aa15.06■□□□□ 0
USH1C-205ENST00000527020 PLEKHA2Q9HB19 425 aa15.06■□□□□ 0
USH1C-205ENST00000527020 CD300LBA8K4G0 201 aa15.05■□□□□ 0
USH1C-205ENST00000527020 PHF1O43189 567 aaPredicted RBP15.05■□□□□ 0
USH1C-205ENST00000527020 IL18BPO95998 194 aa15.05■□□□□ 0
USH1C-205ENST00000527020 GNRHRP30968 328 aa15.05■□□□□ 0
USH1C-205ENST00000527020 KCNJ3P48549 501 aa15.05■□□□□ 0
USH1C-205ENST00000527020 SULT1A2P50226 295 aa15.05■□□□□ 0
USH1C-205ENST00000527020 SRSF7Q16629 238 aaKnown RBP eCLIP15.05■□□□□ 0
USH1C-205ENST00000527020 HIKESHIQ53FT3 197 aa15.05■□□□□ 0
USH1C-205ENST00000527020 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.05■□□□□ 0
USH1C-205ENST00000527020 PUSL1Q8N0Z8 303 aaKnown RBP15.05■□□□□ 0
USH1C-205ENST00000527020 LGI3Q8N145 548 aa15.05■□□□□ 0
USH1C-205ENST00000527020 OR5T2Q8NGG2 359 aa15.05■□□□□ 0
USH1C-205ENST00000527020 WNT2BQ93097 391 aa15.05■□□□□ 0
USH1C-205ENST00000527020 TMEM231Q9H6L2 316 aa15.05■□□□□ 0
USH1C-205ENST00000527020 R4GN57 208 aa15.05■□□□□ 0
USH1C-205ENST00000527020 E5RGE8 158 aa15.05■□□□□ -0
USH1C-205ENST00000527020 KLRC4-KLRK1H3BQV0 150 aa15.05■□□□□ -0
USH1C-205ENST00000527020 CDK2AP1O14519 115 aa15.05■□□□□ -0
USH1C-205ENST00000527020 SCTP09683 121 aa15.05■□□□□ -0
USH1C-205ENST00000527020 SLC10A1Q14973 349 aa15.05■□□□□ -0
USH1C-205ENST00000527020 HERPUD1Q15011 391 aa15.05■□□□□ -0
USH1C-205ENST00000527020 RNFT1Q5M7Z0 435 aa15.05■□□□□ -0
USH1C-205ENST00000527020 LDLRAD3Q86YD5 345 aa15.05■□□□□ -0
USH1C-205ENST00000527020 CCDC71LQ8N9Z2 235 aa15.05■□□□□ -0
USH1C-205ENST00000527020 IP6K3Q96PC2 410 aa15.05■□□□□ -0
USH1C-205ENST00000527020 HRH4Q9H3N8 390 aa15.05■□□□□ -0
USH1C-205ENST00000527020 C12orf49Q9H741 205 aa15.05■□□□□ -0
USH1C-205ENST00000527020 NSG2Q9Y328 171 aa15.05■□□□□ -0
USH1C-205ENST00000527020 MPPED1O15442 326 aa15.04■□□□□ -0
USH1C-205ENST00000527020 FBXO24O75426 580 aa15.04■□□□□ -0
USH1C-205ENST00000527020 SPINK2P20155 84 aa15.04■□□□□ -0
USH1C-205ENST00000527020 DUSP1P28562 367 aa15.04■□□□□ -0
USH1C-205ENST00000527020 TGIF1Q15583 401 aa15.04■□□□□ -0
USH1C-205ENST00000527020 MPV17LQ2QL34 196 aa15.04■□□□□ -0
USH1C-205ENST00000527020 MCEMP1Q8IX19 187 aa15.04■□□□□ -0
USH1C-205ENST00000527020 SLC35G3Q8N808 338 aa15.04■□□□□ -0
USH1C-205ENST00000527020 OR5A2Q8NGI9 324 aa15.04■□□□□ -0
USH1C-205ENST00000527020 OR5P3Q8WZ94 311 aa15.04■□□□□ -0
USH1C-205ENST00000527020 FER1L6-AS2Q96M78 137 aa15.04■□□□□ -0
USH1C-205ENST00000527020 TSNAXQ99598 290 aaKnown RBP15.04■□□□□ -0
USH1C-205ENST00000527020 DEFB127Q9H1M4 99 aa15.04■□□□□ -0
USH1C-205ENST00000527020 ARV1Q9H2C2 271 aa15.04■□□□□ -0
USH1C-205ENST00000527020 TRAPPC2LH3BP13 241 aa15.04■□□□□ -0
USH1C-205ENST00000527020 MED6O75586 246 aa15.04■□□□□ -0
USH1C-205ENST00000527020 JTBO76095 146 aa15.04■□□□□ -0
USH1C-205ENST00000527020 TSC22D1Q15714 1073 aa15.04■□□□□ -0
USH1C-205ENST00000527020 EIF5AL1Q6IS14 154 aaKnown RBP15.04■□□□□ -0
USH1C-205ENST00000527020 MKXQ8IYA7 352 aa15.04■□□□□ -0
USH1C-205ENST00000527020 OR1K1Q8NGR3 316 aa15.04■□□□□ -0
USH1C-205ENST00000527020 WDYHV1Q96HA8 205 aa15.04■□□□□ -0
USH1C-205ENST00000527020 USB1Q9BQ65 265 aaKnown RBP15.04■□□□□ -0
USH1C-205ENST00000527020 WFDC1Q9HC57 220 aa15.04■□□□□ -0
USH1C-205ENST00000527020 SPRR3Q9UBC9 169 aa15.04■□□□□ -0
USH1C-205ENST00000527020 CARHSP1Q9Y2V2 147 aaKnown RBP15.04■□□□□ -0
USH1C-205ENST00000527020 IGKV1-6A0A0C4DH72 117 aa15.03■□□□□ -0
USH1C-205ENST00000527020 C3orf85A0A1B0GTC6 90 aa15.03■□□□□ -0
USH1C-205ENST00000527020 PRSS44E7EML9 344 aa15.03■□□□□ -0
USH1C-205ENST00000527020 HSPB6O14558 160 aa15.03■□□□□ -0
USH1C-205ENST00000527020 PLP2Q04941 152 aa15.03■□□□□ -0
USH1C-205ENST00000527020 BTNL8Q6UX41 500 aa15.03■□□□□ -0
USH1C-205ENST00000527020 UBAC2Q8NBM4 344 aa15.03■□□□□ -0
USH1C-205ENST00000527020 DMBX1Q8NFW5 382 aa15.03■□□□□ -0
USH1C-205ENST00000527020 OR4D5Q8NGN0 318 aa15.03■□□□□ -0
USH1C-205ENST00000527020 BCL2L2Q92843 193 aaPredicted RBP15.03■□□□□ -0
USH1C-205ENST00000527020 ZNF488Q96MN9 340 aa15.03■□□□□ -0
USH1C-205ENST00000527020 ADAT1Q9BUB4 502 aaKnown RBP15.03■□□□□ -0
USH1C-205ENST00000527020 TLNRD1Q9H1K6 362 aa15.03■□□□□ -0
USH1C-205ENST00000527020 FAM86C1Q9NVL1 165 aa15.03■□□□□ -0
USH1C-205ENST00000527020 FAM96BQ9Y3D0 163 aa15.03■□□□□ -0
USH1C-205ENST00000527020 C3orf80F5H4A9 247 aa15.02■□□□□ -0
USH1C-205ENST00000527020 TPD52L2O43399 206 aaKnown RBP15.02■□□□□ -0
USH1C-205ENST00000527020 MUC1P15941 1255 aaPredicted RBP15.02■□□□□ -0
USH1C-205ENST00000527020 CAV2P51636 162 aa15.02■□□□□ -0
USH1C-205ENST00000527020 ZNF169Q14929 603 aaPredicted RBP15.02■□□□□ -0
USH1C-205ENST00000527020 HAGHLQ6PII5 290 aaPredicted RBP15.02■□□□□ -0
USH1C-205ENST00000527020 MEX3BQ6ZN04 569 aaKnown RBP15.02■□□□□ -0
USH1C-205ENST00000527020 DPPA2Q7Z7J5 298 aa15.02■□□□□ -0
USH1C-205ENST00000527020 TMEM222Q9H0R3 208 aa15.02■□□□□ -0
USH1C-205ENST00000527020 OR51B6Q9H340 312 aa15.02■□□□□ -0
USH1C-205ENST00000527020 OPA3Q9H6K4 179 aa15.02■□□□□ -0
USH1C-205ENST00000527020 RHOFQ9HBH0 211 aa15.02■□□□□ -0
USH1C-205ENST00000527020 UQCC1Q9NVA1 299 aa15.02■□□□□ -0
USH1C-205ENST00000527020 LHX6Q9UPM6 363 aa15.02■□□□□ -0
USH1C-205ENST00000527020 IGKV1D-13A0A0B4J2D9 117 aa15.02□□□□□ -0.01
USH1C-205ENST00000527020 TUSC2O75896 110 aa15.02□□□□□ -0.01
USH1C-205ENST00000527020 IGKV1-13P0DP09 117 aa15.02□□□□□ -0.01
USH1C-205ENST00000527020 ID4P47928 161 aa15.02□□□□□ -0.01
USH1C-205ENST00000527020 FBXW12Q6X9E4 464 aa15.02□□□□□ -0.01
USH1C-205ENST00000527020 SVBPQ8N300 66 aa15.02□□□□□ -0.01
USH1C-205ENST00000527020 IL22RA1Q8N6P7 574 aa15.02□□□□□ -0.01
USH1C-205ENST00000527020 TREM1Q9NP99 234 aa15.02□□□□□ -0.01
USH1C-205ENST00000527020 FBXO9Q9UK97 447 aaPredicted RBP15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms