RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 ASCL1P50553 236 aa10.04□□□□□ -0.8
LINC01001-201ENST00000526704 RAB5CP51148 216 aa10.04□□□□□ -0.8
LINC01001-201ENST00000526704 ZFP36L1Q07352 338 aaKnown RBP10.04□□□□□ -0.8
LINC01001-201ENST00000526704 TGIF1Q15583 401 aa10.04□□□□□ -0.8
LINC01001-201ENST00000526704 WIPI1Q5MNZ9 446 aaPredicted RBP10.04□□□□□ -0.8
LINC01001-201ENST00000526704 TMEM182Q6ZP80 229 aaPredicted RBP10.04□□□□□ -0.8
LINC01001-201ENST00000526704 SLC25A26Q70HW3 274 aa10.04□□□□□ -0.8
LINC01001-201ENST00000526704 C5orf24Q7Z6I8 188 aa10.04□□□□□ -0.8
LINC01001-201ENST00000526704 ABHD3Q8WU67 409 aa10.04□□□□□ -0.8
LINC01001-201ENST00000526704 C20orf24Q9BUV8 137 aa10.04□□□□□ -0.8
LINC01001-201ENST00000526704 TMEM222Q9H0R3 208 aa10.04□□□□□ -0.8
LINC01001-201ENST00000526704 PARPBPQ9NWS1 579 aa10.04□□□□□ -0.8
LINC01001-201ENST00000526704 ESPL1Q14674 2120 aa10.04□□□□□ -0.8
LINC01001-201ENST00000526704 TRDCB7Z8K6 153 aa10.04□□□□□ -0.8
LINC01001-201ENST00000526704 GATCO43716 136 aaKnown RBP10.04□□□□□ -0.8
LINC01001-201ENST00000526704 CFIP05156 583 aa10.04□□□□□ -0.8
LINC01001-201ENST00000526704 ZNF806P0C7X5 589 aa10.04□□□□□ -0.8
LINC01001-201ENST00000526704 RPS18P62269 152 aaKnown RBP10.04□□□□□ -0.8
LINC01001-201ENST00000526704 SNRPEP62304 92 aaKnown RBP10.04□□□□□ -0.8
LINC01001-201ENST00000526704 TRA2AQ13595 282 aaKnown RBP eCLIP10.04□□□□□ -0.8
LINC01001-201ENST00000526704 SLC23A3Q6PIS1 610 aa10.04□□□□□ -0.8
LINC01001-201ENST00000526704 PPP1R32Q7Z5V6 425 aa10.04□□□□□ -0.8
LINC01001-201ENST00000526704 CPEB3Q8NE35 698 aaKnown RBP10.04□□□□□ -0.8
LINC01001-201ENST00000526704 ZNF845Q96IR2 970 aaPredicted RBP10.04□□□□□ -0.8
LINC01001-201ENST00000526704 C1QTNF5Q9BXJ0 243 aa10.04□□□□□ -0.8
LINC01001-201ENST00000526704 DEPPQ9NTK1 212 aa10.04□□□□□ -0.8
LINC01001-201ENST00000526704 A0A1W2PPH5 198 aa10.03□□□□□ -0.8
LINC01001-201ENST00000526704 IGSF23A1L1A6 192 aa10.03□□□□□ -0.8
LINC01001-201ENST00000526704 UMAD1C9J7I0 102 aa10.03□□□□□ -0.8
LINC01001-201ENST00000526704 RPL36A-HNRNPH2H7BZ11 118 aa10.03□□□□□ -0.8
LINC01001-201ENST00000526704 CDS2O95674 445 aa10.03□□□□□ -0.8
LINC01001-201ENST00000526704 DAOP14920 347 aa10.03□□□□□ -0.8
LINC01001-201ENST00000526704 GNRHRP30968 328 aa10.03□□□□□ -0.8
LINC01001-201ENST00000526704 GNMTQ14749 295 aa10.03□□□□□ -0.8
LINC01001-201ENST00000526704 EXTL1Q92935 676 aa10.03□□□□□ -0.8
LINC01001-201ENST00000526704 ISOC2Q96AB3 205 aa10.03□□□□□ -0.8
LINC01001-201ENST00000526704 PRDM14Q9GZV8 571 aa10.03□□□□□ -0.8
LINC01001-201ENST00000526704 FGF23Q9GZV9 251 aaPredicted RBP10.03□□□□□ -0.8
LINC01001-201ENST00000526704 PLSCR2Q9NRY7 297 aa10.03□□□□□ -0.8
LINC01001-201ENST00000526704 SLC7A10Q9NS82 523 aa10.03□□□□□ -0.8
LINC01001-201ENST00000526704 CRIM1Q9NZV1 1036 aa10.03□□□□□ -0.8
LINC01001-201ENST00000526704 RFNGQ9Y644 331 aa10.03□□□□□ -0.8
LINC01001-201ENST00000526704 ARHGAP21Q5T5U3 1957 aa10.03□□□□□ -0.8
LINC01001-201ENST00000526704 ZNF407Q9C0G0 2248 aa10.03□□□□□ -0.8
LINC01001-201ENST00000526704 A0A1B0GV50 99 aa10.03□□□□□ -0.8
LINC01001-201ENST00000526704 PINLYPA6NC86 204 aa10.03□□□□□ -0.8
LINC01001-201ENST00000526704 FAM24AA6NFZ4 105 aa10.03□□□□□ -0.8
LINC01001-201ENST00000526704 A6NLC8 198 aa10.03□□□□□ -0.8
LINC01001-201ENST00000526704 C1orf196B1AJZ1 125 aa10.03□□□□□ -0.8
LINC01001-201ENST00000526704 M0R036 132 aa10.03□□□□□ -0.8
LINC01001-201ENST00000526704 CYTIPO60759 359 aa10.03□□□□□ -0.8
LINC01001-201ENST00000526704 MT-ND4LP03901 98 aa10.03□□□□□ -0.8
LINC01001-201ENST00000526704 BCL3P20749 454 aa10.03□□□□□ -0.8
LINC01001-201ENST00000526704 RNF212Q495C1 297 aa10.03□□□□□ -0.8
LINC01001-201ENST00000526704 Q6ZS49 121 aa10.03□□□□□ -0.8
LINC01001-201ENST00000526704 SLC16A13Q7RTY0 426 aa10.03□□□□□ -0.8
LINC01001-201ENST00000526704 DPPA2Q7Z7J5 298 aa10.03□□□□□ -0.8
LINC01001-201ENST00000526704 TBC1D26Q86UD7 250 aa10.03□□□□□ -0.8
LINC01001-201ENST00000526704 OR2C3Q8N628 320 aa10.03□□□□□ -0.8
LINC01001-201ENST00000526704 SUMF1Q8NBK3 374 aa10.03□□□□□ -0.8
LINC01001-201ENST00000526704 Q8NFD4 153 aa10.03□□□□□ -0.8
LINC01001-201ENST00000526704 FAM213BQ8TBF2 198 aa10.03□□□□□ -0.8
LINC01001-201ENST00000526704 BCL2L14Q9BZR8 327 aa10.03□□□□□ -0.8
LINC01001-201ENST00000526704 FBXO7Q9Y3I1 522 aa10.03□□□□□ -0.8
LINC01001-201ENST00000526704 C5orf52A6NGY3 159 aa10.02□□□□□ -0.81
LINC01001-201ENST00000526704 TRAPPC6AO75865 159 aa10.02□□□□□ -0.81
LINC01001-201ENST00000526704 IGHV3-9P01782 118 aa10.02□□□□□ -0.81
LINC01001-201ENST00000526704 AGAP20933 346 aa10.02□□□□□ -0.81
LINC01001-201ENST00000526704 SRPXP78539 464 aa10.02□□□□□ -0.81
LINC01001-201ENST00000526704 CLINT1Q14677 625 aa10.02□□□□□ -0.81
LINC01001-201ENST00000526704 FAM185AQ8N0U4 392 aa10.02□□□□□ -0.81
LINC01001-201ENST00000526704 SLAMF9Q96A28 289 aa10.02□□□□□ -0.81
LINC01001-201ENST00000526704 TMEM56Q96MV1 263 aa10.02□□□□□ -0.81
LINC01001-201ENST00000526704 HS3ST6Q96QI5 342 aa10.02□□□□□ -0.81
LINC01001-201ENST00000526704 TAAR9Q96RI9 348 aa10.02□□□□□ -0.81
LINC01001-201ENST00000526704 OR51M1Q9H341 326 aa10.02□□□□□ -0.81
LINC01001-201ENST00000526704 TUBA4BQ9H853 241 aa10.02□□□□□ -0.81
LINC01001-201ENST00000526704 TMEM56-RWDD3S4R434 201 aa10.02□□□□□ -0.81
LINC01001-201ENST00000526704 TNRC18O15417 2968 aaPredicted RBP10.02□□□□□ -0.81
LINC01001-201ENST00000526704 A0A1B0GW64 132 aa10.02□□□□□ -0.81
LINC01001-201ENST00000526704 A0A1W2PPE3 182 aa10.02□□□□□ -0.81
LINC01001-201ENST00000526704 PATE3B3GLJ2 98 aa10.02□□□□□ -0.81
LINC01001-201ENST00000526704 ZNHIT1O43257 154 aa10.02□□□□□ -0.81
LINC01001-201ENST00000526704 PITX3O75364 302 aa10.02□□□□□ -0.81
LINC01001-201ENST00000526704 S100PP25815 95 aa10.02□□□□□ -0.81
LINC01001-201ENST00000526704 OTX2P32243 289 aa10.02□□□□□ -0.81
LINC01001-201ENST00000526704 ZNF818PQ6ZRF7 136 aa10.02□□□□□ -0.81
LINC01001-201ENST00000526704 COLCA1Q6ZS62 124 aa10.02□□□□□ -0.81
LINC01001-201ENST00000526704 SELENOHQ8IZQ5 122 aaKnown RBP10.02□□□□□ -0.81
LINC01001-201ENST00000526704 OR56B2PQ8NGI1 322 aa10.02□□□□□ -0.81
LINC01001-201ENST00000526704 SLC35B3Q9H1N7 401 aa10.02□□□□□ -0.81
LINC01001-201ENST00000526704 Q9N2K0 584 aa10.02□□□□□ -0.81
LINC01001-201ENST00000526704 NIT2Q9NQR4 276 aa10.02□□□□□ -0.81
LINC01001-201ENST00000526704 FAM90A10PA6NDY2 464 aa10.01□□□□□ -0.81
LINC01001-201ENST00000526704 FAM90A18PA6NE21 464 aa10.01□□□□□ -0.81
LINC01001-201ENST00000526704 FAM90A16PA6NEW6 464 aa10.01□□□□□ -0.81
LINC01001-201ENST00000526704 FAM90A20PA6NIJ5 464 aa10.01□□□□□ -0.81
LINC01001-201ENST00000526704 FAM90A8PA6NJQ4 464 aa10.01□□□□□ -0.81
LINC01001-201ENST00000526704 FAM90A7PA6NKC0 464 aa10.01□□□□□ -0.81
LINC01001-201ENST00000526704 ZNF724A8MTY0 619 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms