RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 MKXQ8IYA7 352 aa8.96□□□□□ -0.98
NEDD8-204ENST00000526430 OR10K1Q8NGX5 313 aa8.96□□□□□ -0.98
NEDD8-204ENST00000526430 DYRK2Q92630 601 aa8.96□□□□□ -0.98
NEDD8-204ENST00000526430 UPRTQ96BW1 309 aa8.96□□□□□ -0.98
NEDD8-204ENST00000526430 C12orf43Q96C57 262 aaKnown RBP8.96□□□□□ -0.98
NEDD8-204ENST00000526430 SDSLQ96GA7 329 aa8.96□□□□□ -0.98
NEDD8-204ENST00000526430 GAFA1Q96PS6 74 aa8.96□□□□□ -0.98
NEDD8-204ENST00000526430 CCL13Q99616 98 aa8.96□□□□□ -0.98
NEDD8-204ENST00000526430 IL36GQ9NZH8 169 aa8.96□□□□□ -0.98
NEDD8-204ENST00000526430 NLKQ9UBE8 527 aa8.96□□□□□ -0.98
NEDD8-204ENST00000526430 POLDIP2Q9Y2S7 368 aa8.96□□□□□ -0.98
NEDD8-204ENST00000526430 TENM2Q9NT68 2774 aa8.96□□□□□ -0.98
NEDD8-204ENST00000526430 TRAV38-1A0A0B4J264 116 aa8.95□□□□□ -0.98
NEDD8-204ENST00000526430 TMEM82A0PJX8 343 aa8.95□□□□□ -0.98
NEDD8-204ENST00000526430 RFPL4AA6NLU0 287 aa8.95□□□□□ -0.98
NEDD8-204ENST00000526430 RFPL4AL1F8VTS6 287 aa8.95□□□□□ -0.98
NEDD8-204ENST00000526430 LDLRAD4O15165 306 aa8.95□□□□□ -0.98
NEDD8-204ENST00000526430 ZNF737O75373 536 aa8.95□□□□□ -0.98
NEDD8-204ENST00000526430 ARL6IP5O75915 188 aa8.95□□□□□ -0.98
NEDD8-204ENST00000526430 DUSP1P28562 367 aa8.95□□□□□ -0.98
NEDD8-204ENST00000526430 PLA2G7Q13093 441 aa8.95□□□□□ -0.98
NEDD8-204ENST00000526430 ZNF146Q15072 292 aa8.95□□□□□ -0.98
NEDD8-204ENST00000526430 DGUOKQ16854 277 aa8.95□□□□□ -0.98
NEDD8-204ENST00000526430 MICBQ29980 383 aa8.95□□□□□ -0.98
NEDD8-204ENST00000526430 DEFB112Q30KQ8 113 aa8.95□□□□□ -0.98
NEDD8-204ENST00000526430 GDPGP1Q6ZNW5 385 aa8.95□□□□□ -0.98
NEDD8-204ENST00000526430 ANKRD13BQ86YJ7 626 aa8.95□□□□□ -0.98
NEDD8-204ENST00000526430 FAM58AQ8N1B3 248 aa8.95□□□□□ -0.98
NEDD8-204ENST00000526430 FAM216BQ8N7L0 139 aa8.95□□□□□ -0.98
NEDD8-204ENST00000526430 TMEM104Q8NE00 496 aa8.95□□□□□ -0.98
NEDD8-204ENST00000526430 OR51T1Q8NGJ9 327 aa8.95□□□□□ -0.98
NEDD8-204ENST00000526430 TNFAIP8L1Q8WVP5 186 aa8.95□□□□□ -0.98
NEDD8-204ENST00000526430 ZDHHC16Q969W1 377 aa8.95□□□□□ -0.98
NEDD8-204ENST00000526430 KCNK15Q9H427 330 aa8.95□□□□□ -0.98
NEDD8-204ENST00000526430 SOX21Q9Y651 276 aaPredicted RBP8.95□□□□□ -0.98
NEDD8-204ENST00000526430 SMIM30A4D0T7 59 aa8.94□□□□□ -0.98
NEDD8-204ENST00000526430 ISPDA4D126 451 aa8.94□□□□□ -0.98
NEDD8-204ENST00000526430 LMO1P25800 156 aa8.94□□□□□ -0.98
NEDD8-204ENST00000526430 PRDX2P32119 198 aa8.94□□□□□ -0.98
NEDD8-204ENST00000526430 SDC2P34741 201 aa8.94□□□□□ -0.98
NEDD8-204ENST00000526430 RPS19P39019 145 aaKnown RBP8.94□□□□□ -0.98
NEDD8-204ENST00000526430 RPL5P46777 297 aaKnown RBP8.94□□□□□ -0.98
NEDD8-204ENST00000526430 MTNR1BP49286 362 aa8.94□□□□□ -0.98
NEDD8-204ENST00000526430 CAV3P56539 151 aa8.94□□□□□ -0.98
NEDD8-204ENST00000526430 BPIFB3P59826 476 aa8.94□□□□□ -0.98
NEDD8-204ENST00000526430 FGF12P61328 243 aa8.94□□□□□ -0.98
NEDD8-204ENST00000526430 UNC119Q13432 240 aa8.94□□□□□ -0.98
NEDD8-204ENST00000526430 WDR25Q64LD2 544 aaPredicted RBP8.94□□□□□ -0.98
NEDD8-204ENST00000526430 SIGIRRQ6IA17 410 aa8.94□□□□□ -0.98
NEDD8-204ENST00000526430 OR10K2Q6IF99 312 aa8.94□□□□□ -0.98
NEDD8-204ENST00000526430 GLIPR1L1Q6UWM5 242 aa8.94□□□□□ -0.98
NEDD8-204ENST00000526430 MUC20Q8N307 709 aaPredicted RBP8.94□□□□□ -0.98
NEDD8-204ENST00000526430 JAGN1Q8N5M9 183 aa8.94□□□□□ -0.98
NEDD8-204ENST00000526430 NKAIN3Q8N8D7 197 aa8.94□□□□□ -0.98
NEDD8-204ENST00000526430 ZNRF1Q8ND25 227 aa8.94□□□□□ -0.98
NEDD8-204ENST00000526430 TBC1D15Q8TC07 691 aa8.94□□□□□ -0.98
NEDD8-204ENST00000526430 UQCC2Q9BRT2 126 aa8.94□□□□□ -0.98
NEDD8-204ENST00000526430 RHOFQ9HBH0 211 aa8.94□□□□□ -0.98
NEDD8-204ENST00000526430 EXOSC4Q9NPD3 245 aaKnown RBP8.94□□□□□ -0.98
NEDD8-204ENST00000526430 CKLFQ9UBR5 152 aa8.94□□□□□ -0.98
NEDD8-204ENST00000526430 MIOXQ9UGB7 285 aa8.94□□□□□ -0.98
NEDD8-204ENST00000526430 SSR3Q9UNL2 185 aa8.94□□□□□ -0.98
NEDD8-204ENST00000526430 ING4Q9UNL4 249 aa8.94□□□□□ -0.98
NEDD8-204ENST00000526430 MRPS28Q9Y2Q9 187 aaKnown RBP8.94□□□□□ -0.98
NEDD8-204ENST00000526430 V9GY05 133 aa8.94□□□□□ -0.98
NEDD8-204ENST00000526430 A0A0B4J203 849 aa8.93□□□□□ -0.98
NEDD8-204ENST00000526430 TRAV40A0A0B4J280 105 aa8.93□□□□□ -0.98
NEDD8-204ENST00000526430 LOC100506127A0A0U1RQW1 187 aa8.93□□□□□ -0.98
NEDD8-204ENST00000526430 TMEM14DPA8MWL7 114 aa8.93□□□□□ -0.98
NEDD8-204ENST00000526430 SLC17A2O00624 439 aa8.93□□□□□ -0.98
NEDD8-204ENST00000526430 DVL1O14640 695 aa8.93□□□□□ -0.98
NEDD8-204ENST00000526430 SIGLEC5O15389 551 aa8.93□□□□□ -0.98
NEDD8-204ENST00000526430 MAGEB3O15480 346 aa8.93□□□□□ -0.98
NEDD8-204ENST00000526430 ADAM20O43506 726 aa8.93□□□□□ -0.98
NEDD8-204ENST00000526430 NDUFA2O43678 99 aa8.93□□□□□ -0.98
NEDD8-204ENST00000526430 AIREO43918 545 aa8.93□□□□□ -0.98
NEDD8-204ENST00000526430 PSPNO60542 156 aa8.93□□□□□ -0.98
NEDD8-204ENST00000526430 NXPH2O95156 264 aa8.93□□□□□ -0.98
NEDD8-204ENST00000526430 GABARAPO95166 117 aa8.93□□□□□ -0.98
NEDD8-204ENST00000526430 SLC2A2P11168 524 aaPredicted RBP8.93□□□□□ -0.98
NEDD8-204ENST00000526430 CLDN12P56749 244 aa8.93□□□□□ -0.98
NEDD8-204ENST00000526430 NCS1P62166 190 aa8.93□□□□□ -0.98
NEDD8-204ENST00000526430 LSM3P62310 102 aaKnown RBP8.93□□□□□ -0.98
NEDD8-204ENST00000526430 C2orf76Q3KRA6 126 aa8.93□□□□□ -0.98
NEDD8-204ENST00000526430 NHLRC3Q5JS37 347 aa8.93□□□□□ -0.98
NEDD8-204ENST00000526430 GPR107Q5VW38 600 aa8.93□□□□□ -0.98
NEDD8-204ENST00000526430 GLT8D1Q68CQ7 371 aa8.93□□□□□ -0.98
NEDD8-204ENST00000526430 CCBE1Q6UXH8 406 aaPredicted RBP8.93□□□□□ -0.98
NEDD8-204ENST00000526430 SPICQ8N5J4 248 aa8.93□□□□□ -0.98
NEDD8-204ENST00000526430 FOXRED1Q96CU9 486 aaPredicted RBP8.93□□□□□ -0.98
NEDD8-204ENST00000526430 NEIL1Q96FI4 390 aaPredicted RBP8.93□□□□□ -0.98
NEDD8-204ENST00000526430 GPER1Q99527 375 aa8.93□□□□□ -0.98
NEDD8-204ENST00000526430 DNTTIP1Q9H147 329 aa8.93□□□□□ -0.98
NEDD8-204ENST00000526430 C16orf95Q9H693 158 aa8.93□□□□□ -0.98
NEDD8-204ENST00000526430 VCX3AQ9NNX9 186 aa8.93□□□□□ -0.98
NEDD8-204ENST00000526430 STAB2Q8WWQ8 2551 aa8.92□□□□□ -0.98
NEDD8-204ENST00000526430 DSCAML1Q8TD84 2053 aa8.92□□□□□ -0.98
NEDD8-204ENST00000526430 IGHV3OR16-10A0A075B7F0 116 aa8.92□□□□□ -0.98
NEDD8-204ENST00000526430 A0A0A6YYD4 124 aa8.92□□□□□ -0.98
NEDD8-204ENST00000526430 TRAV24A0A0B4J272 114 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms