RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 NAT1P18440 290 aa11.39□□□□□ -0.59
PCDHGB1-201ENST00000523390 C9orf152Q5JTZ5 239 aa11.39□□□□□ -0.59
PCDHGB1-201ENST00000523390 RIPPLY2Q5TAB7 128 aa11.39□□□□□ -0.59
PCDHGB1-201ENST00000523390 OR11H7Q8NGC8 314 aa11.39□□□□□ -0.59
PCDHGB1-201ENST00000523390 TRBV5-7A0A0A0MS05 114 aa11.38□□□□□ -0.59
PCDHGB1-201ENST00000523390 FOXO1Q12778 655 aa11.38□□□□□ -0.59
PCDHGB1-201ENST00000523390 CLEC18BQ6UXF7 455 aa11.38□□□□□ -0.59
PCDHGB1-201ENST00000523390 GNPNAT1Q96EK6 184 aaPredicted RBP11.38□□□□□ -0.59
PCDHGB1-201ENST00000523390 KCNK7Q9Y2U2 307 aa11.38□□□□□ -0.59
PCDHGB1-201ENST00000523390 ZNF407Q9C0G0 2248 aa11.38□□□□□ -0.59
PCDHGB1-201ENST00000523390 C3orf85A0A1B0GTC6 90 aa11.38□□□□□ -0.59
PCDHGB1-201ENST00000523390 ZNF724A8MTY0 619 aa11.38□□□□□ -0.59
PCDHGB1-201ENST00000523390 C9orf172C9J069 976 aa11.38□□□□□ -0.59
PCDHGB1-201ENST00000523390 GPR37O15354 613 aa11.38□□□□□ -0.59
PCDHGB1-201ENST00000523390 FCGR3BO75015 233 aa11.38□□□□□ -0.59
PCDHGB1-201ENST00000523390 SULT1A3P0DMM9 295 aa11.38□□□□□ -0.59
PCDHGB1-201ENST00000523390 SULT1A4P0DMN0 295 aa11.38□□□□□ -0.59
PCDHGB1-201ENST00000523390 PINX1Q96BK5 328 aaKnown RBP11.38□□□□□ -0.59
PCDHGB1-201ENST00000523390 TAAR6Q96RI8 345 aa11.38□□□□□ -0.59
PCDHGB1-201ENST00000523390 SSX3Q99909 188 aa11.38□□□□□ -0.59
PCDHGB1-201ENST00000523390 C20orf24Q9BUV8 137 aa11.38□□□□□ -0.59
PCDHGB1-201ENST00000523390 OR2D2Q9H210 308 aa11.38□□□□□ -0.59
PCDHGB1-201ENST00000523390 SLC25A32Q9H2D1 315 aa11.38□□□□□ -0.59
PCDHGB1-201ENST00000523390 TMED3Q9Y3Q3 217 aa11.38□□□□□ -0.59
PCDHGB1-201ENST00000523390 HAGHQ16775 308 aa11.38□□□□□ -0.59
PCDHGB1-201ENST00000523390 FAM219AQ8IW50 185 aa11.38□□□□□ -0.59
PCDHGB1-201ENST00000523390 TMEM123Q8N131 208 aa11.38□□□□□ -0.59
PCDHGB1-201ENST00000523390 OR5M8Q8NGP6 311 aa11.38□□□□□ -0.59
PCDHGB1-201ENST00000523390 ASB13Q8WXK3 278 aa11.38□□□□□ -0.59
PCDHGB1-201ENST00000523390 G6PC2Q9NQR9 355 aa11.38□□□□□ -0.59
PCDHGB1-201ENST00000523390 KLK13Q9UKR3 277 aa11.38□□□□□ -0.59
PCDHGB1-201ENST00000523390 LAMP3Q9UQV4 416 aa11.38□□□□□ -0.59
PCDHGB1-201ENST00000523390 RPS10-NUDT3A0A1W2PQS6 291 aa11.38□□□□□ -0.59
PCDHGB1-201ENST00000523390 A8MXE2 369 aa11.38□□□□□ -0.59
PCDHGB1-201ENST00000523390 ZIC3O60481 467 aa11.38□□□□□ -0.59
PCDHGB1-201ENST00000523390 CD3EP07766 207 aa11.38□□□□□ -0.59
PCDHGB1-201ENST00000523390 LPAR6P43657 344 aa11.38□□□□□ -0.59
PCDHGB1-201ENST00000523390 RPS10P46783 165 aaKnown RBP11.38□□□□□ -0.59
PCDHGB1-201ENST00000523390 ZFP36L1Q07352 338 aaKnown RBP11.38□□□□□ -0.59
PCDHGB1-201ENST00000523390 UNQ9370/PRO34162Q6UXP9 181 aa11.38□□□□□ -0.59
PCDHGB1-201ENST00000523390 LPAR5Q9H1C0 372 aa11.38□□□□□ -0.59
PCDHGB1-201ENST00000523390 PRR33A8MZF0 331 aa11.37□□□□□ -0.59
PCDHGB1-201ENST00000523390 C16orf97H3BN30 126 aa11.37□□□□□ -0.59
PCDHGB1-201ENST00000523390 SUCLG1P53597 346 aaKnown RBP11.37□□□□□ -0.59
PCDHGB1-201ENST00000523390 ST7LQ8TDW4 575 aa11.37□□□□□ -0.59
PCDHGB1-201ENST00000523390 ADGRG7Q96K78 797 aa11.37□□□□□ -0.59
PCDHGB1-201ENST00000523390 HAND1O96004 215 aa11.37□□□□□ -0.59
PCDHGB1-201ENST00000523390 MDH2P40926 338 aaKnown RBP11.37□□□□□ -0.59
PCDHGB1-201ENST00000523390 HFEQ30201 348 aa11.37□□□□□ -0.59
PCDHGB1-201ENST00000523390 MUC6Q6W4X9 2439 aa11.37□□□□□ -0.59
PCDHGB1-201ENST00000523390 GFRA3O60609 400 aa11.37□□□□□ -0.59
PCDHGB1-201ENST00000523390 CYTIPO60759 359 aa11.37□□□□□ -0.59
PCDHGB1-201ENST00000523390 ISG15P05161 165 aa11.37□□□□□ -0.59
PCDHGB1-201ENST00000523390 CTSDP07339 412 aaPredicted RBP11.37□□□□□ -0.59
PCDHGB1-201ENST00000523390 PRR7Q8TB68 274 aa11.37□□□□□ -0.59
PCDHGB1-201ENST00000523390 NPAS1Q99742 590 aa11.37□□□□□ -0.59
PCDHGB1-201ENST00000523390 NIPSNAP3BQ9BS92 247 aa11.37□□□□□ -0.59
PCDHGB1-201ENST00000523390 MYOZ1Q9NP98 299 aaPredicted RBP11.37□□□□□ -0.59
PCDHGB1-201ENST00000523390 GNG13Q9P2W3 67 aa11.37□□□□□ -0.59
PCDHGB1-201ENST00000523390 NPIPB13A6NJU9 1138 aa11.36□□□□□ -0.59
PCDHGB1-201ENST00000523390 NPIPB4C9JG80 1138 aa11.36□□□□□ -0.59
PCDHGB1-201ENST00000523390 AQP7O14520 342 aa11.36□□□□□ -0.59
PCDHGB1-201ENST00000523390 LYPD3O95274 346 aa11.36□□□□□ -0.59
PCDHGB1-201ENST00000523390 PPYP01298 95 aa11.36□□□□□ -0.59
PCDHGB1-201ENST00000523390 LHX4Q969G2 390 aa11.36□□□□□ -0.59
PCDHGB1-201ENST00000523390 MALSU1Q96EH3 234 aa11.36□□□□□ -0.59
PCDHGB1-201ENST00000523390 SCMH1Q96GD3 660 aa11.36□□□□□ -0.59
PCDHGB1-201ENST00000523390 SLC35E1Q96K37 410 aa11.36□□□□□ -0.59
PCDHGB1-201ENST00000523390 TIMP4Q99727 224 aa11.36□□□□□ -0.59
PCDHGB1-201ENST00000523390 BIN3Q9NQY0 253 aa11.36□□□□□ -0.59
PCDHGB1-201ENST00000523390 CACNG5Q9UF02 275 aa11.36□□□□□ -0.59
PCDHGB1-201ENST00000523390 ARPC4-TTLL3A0A0A6YYG9 625 aa11.36□□□□□ -0.59
PCDHGB1-201ENST00000523390 PPIHO43447 177 aaKnown RBP11.36□□□□□ -0.59
PCDHGB1-201ENST00000523390 GNB2P62879 340 aa11.36□□□□□ -0.59
PCDHGB1-201ENST00000523390 MPV17LQ2QL34 196 aa11.36□□□□□ -0.59
PCDHGB1-201ENST00000523390 ZNF703Q9H7S9 590 aaPredicted RBP11.36□□□□□ -0.59
PCDHGB1-201ENST00000523390 KCNIP2Q9NS61 270 aa11.36□□□□□ -0.59
PCDHGB1-201ENST00000523390 RASL12Q9NYN1 266 aa11.36□□□□□ -0.59
PCDHGB1-201ENST00000523390 PRR19A6NJB7 356 aa11.36□□□□□ -0.59
PCDHGB1-201ENST00000523390 TRDCB7Z8K6 153 aa11.36□□□□□ -0.59
PCDHGB1-201ENST00000523390 TMPRSS2O15393 492 aa11.36□□□□□ -0.59
PCDHGB1-201ENST00000523390 KLF7O75840 302 aaPredicted RBP11.36□□□□□ -0.59
PCDHGB1-201ENST00000523390 KLK2P20151 261 aa11.36□□□□□ -0.59
PCDHGB1-201ENST00000523390 KCNJ3P48549 501 aa11.36□□□□□ -0.59
PCDHGB1-201ENST00000523390 LRRC75AQ8NAA5 344 aa11.36□□□□□ -0.59
PCDHGB1-201ENST00000523390 ADAD2Q8NCV1 583 aaKnown RBP11.36□□□□□ -0.59
PCDHGB1-201ENST00000523390 UHRF2Q96PU4 802 aa11.36□□□□□ -0.59
PCDHGB1-201ENST00000523390 CIB3Q96Q77 187 aaPredicted RBP11.36□□□□□ -0.59
PCDHGB1-201ENST00000523390 CCL28Q9NRJ3 127 aa11.36□□□□□ -0.59
PCDHGB1-201ENST00000523390 IGHMP01871 453 aa11.36□□□□□ -0.59
PCDHGB1-201ENST00000523390 CD37P11049 281 aa11.36□□□□□ -0.59
PCDHGB1-201ENST00000523390 MPPED2Q15777 294 aa11.36□□□□□ -0.59
PCDHGB1-201ENST00000523390 C1orf100Q5SVJ3 147 aa11.36□□□□□ -0.59
PCDHGB1-201ENST00000523390 C1orf185Q5T7R7 199 aa11.36□□□□□ -0.59
PCDHGB1-201ENST00000523390 RGP1Q92546 391 aaPredicted RBP11.36□□□□□ -0.59
PCDHGB1-201ENST00000523390 PTX4Q96A99 478 aa11.36□□□□□ -0.59
PCDHGB1-201ENST00000523390 WNT5BQ9H1J7 359 aa11.36□□□□□ -0.59
PCDHGB1-201ENST00000523390 RYDENQ9NUL5 291 aaKnown RBP11.36□□□□□ -0.59
PCDHGB1-201ENST00000523390 ZNF629Q9UEG4 869 aaPredicted RBP11.36□□□□□ -0.59
PCDHGB1-201ENST00000523390 ELF5Q9UKW6 265 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms