RNA–Protein interactions for RNA: ENST00000522854.5

CSGALNACT1-211, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 1,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-211ENST00000522854 CADM3Q8N126 398 aa12.65□□□□□ -0.38
CSGALNACT1-211ENST00000522854 CD177Q8N6Q3 437 aa12.65□□□□□ -0.38
CSGALNACT1-211ENST00000522854 DEFB108BQ8NET1 73 aa12.65□□□□□ -0.38
CSGALNACT1-211ENST00000522854 PLPPR1Q8TBJ4 325 aa12.65□□□□□ -0.38
CSGALNACT1-211ENST00000522854 VRK1Q99986 396 aaPredicted RBP12.65□□□□□ -0.38
CSGALNACT1-211ENST00000522854 DPAGT1Q9H3H5 408 aa12.65□□□□□ -0.38
CSGALNACT1-211ENST00000522854 SAP30LQ9HAJ7 183 aa12.65□□□□□ -0.38
CSGALNACT1-211ENST00000522854 CENPEQ02224 2701 aa12.65□□□□□ -0.38
CSGALNACT1-211ENST00000522854 A0A1B0GW55 424 aa12.65□□□□□ -0.38
CSGALNACT1-211ENST00000522854 FAM90A10PA6NDY2 464 aa12.65□□□□□ -0.38
CSGALNACT1-211ENST00000522854 FAM90A18PA6NE21 464 aa12.65□□□□□ -0.38
CSGALNACT1-211ENST00000522854 FAM90A16PA6NEW6 464 aa12.65□□□□□ -0.38
CSGALNACT1-211ENST00000522854 FAM90A20PA6NIJ5 464 aa12.65□□□□□ -0.38
CSGALNACT1-211ENST00000522854 FAM90A8PA6NJQ4 464 aa12.65□□□□□ -0.38
CSGALNACT1-211ENST00000522854 FAM90A7PA6NKC0 464 aa12.65□□□□□ -0.38
CSGALNACT1-211ENST00000522854 FAM90A22PA8MWA6 464 aa12.65□□□□□ -0.38
CSGALNACT1-211ENST00000522854 FAM90A12PA8MX19 464 aa12.65□□□□□ -0.38
CSGALNACT1-211ENST00000522854 FAM90A5PA8MXJ8 464 aa12.65□□□□□ -0.38
CSGALNACT1-211ENST00000522854 VSTM5A8MXK1 200 aa12.65□□□□□ -0.38
CSGALNACT1-211ENST00000522854 FAM90A23PA8MXZ1 464 aa12.65□□□□□ -0.38
CSGALNACT1-211ENST00000522854 MCRIP1C9JLW8 97 aa12.65□□□□□ -0.38
CSGALNACT1-211ENST00000522854 LYNX1G3V0Z9 82 aa12.65□□□□□ -0.38
CSGALNACT1-211ENST00000522854 LY6HO94772 140 aa12.65□□□□□ -0.38
CSGALNACT1-211ENST00000522854 HPXP02790 462 aa12.65□□□□□ -0.38
CSGALNACT1-211ENST00000522854 CD74P04233 296 aa12.65□□□□□ -0.38
CSGALNACT1-211ENST00000522854 FAM90A15PP0C7V4 464 aa12.65□□□□□ -0.38
CSGALNACT1-211ENST00000522854 FAM90A13PP0C7W8 464 aa12.65□□□□□ -0.38
CSGALNACT1-211ENST00000522854 FAM90A14PP0C7W9 464 aa12.65□□□□□ -0.38
CSGALNACT1-211ENST00000522854 FAM90A24PP0C7X0 464 aa12.65□□□□□ -0.38
CSGALNACT1-211ENST00000522854 DUX4L2P0CJ85 424 aa12.65□□□□□ -0.38
CSGALNACT1-211ENST00000522854 DUX4L3P0CJ86 424 aa12.65□□□□□ -0.38
CSGALNACT1-211ENST00000522854 DUX4L4P0CJ87 422 aa12.65□□□□□ -0.38
CSGALNACT1-211ENST00000522854 DUX4L5P0CJ88 424 aa12.65□□□□□ -0.38
CSGALNACT1-211ENST00000522854 DUX4L6P0CJ89 424 aa12.65□□□□□ -0.38
CSGALNACT1-211ENST00000522854 DUX4L7P0CJ90 424 aa12.65□□□□□ -0.38
CSGALNACT1-211ENST00000522854 LYNX1P0DP58 116 aa12.65□□□□□ -0.38
CSGALNACT1-211ENST00000522854 MRPS15P82914 257 aaKnown RBP12.65□□□□□ -0.38
CSGALNACT1-211ENST00000522854 SSBP1Q04837 148 aaKnown RBP12.65□□□□□ -0.38
CSGALNACT1-211ENST00000522854 EFNB3Q15768 340 aa12.65□□□□□ -0.38
CSGALNACT1-211ENST00000522854 PAN3Q58A45 887 aaKnown RBP12.65□□□□□ -0.38
CSGALNACT1-211ENST00000522854 DUX4L9Q6RFH8 374 aaPredicted RBP12.65□□□□□ -0.38
CSGALNACT1-211ENST00000522854 CHMP1AQ9HD42 196 aaPredicted RBP12.65□□□□□ -0.38
CSGALNACT1-211ENST00000522854 DECR2Q9NUI1 292 aa12.65□□□□□ -0.38
CSGALNACT1-211ENST00000522854 DUX4Q9UBX2 424 aa12.65□□□□□ -0.38
CSGALNACT1-211ENST00000522854 ANAPC10Q9UM13 185 aa12.65□□□□□ -0.38
CSGALNACT1-211ENST00000522854 PLEKHA6Q9Y2H5 1048 aa12.65□□□□□ -0.38
CSGALNACT1-211ENST00000522854 IGKV1D-17A0A075B6S4 117 aa12.64□□□□□ -0.39
CSGALNACT1-211ENST00000522854 FUOMA2VDF0 154 aa12.64□□□□□ -0.39
CSGALNACT1-211ENST00000522854 B9A039 149 aa12.64□□□□□ -0.39
CSGALNACT1-211ENST00000522854 LHBP01229 141 aa12.64□□□□□ -0.39
CSGALNACT1-211ENST00000522854 ACAA1P09110 424 aaPredicted RBP12.64□□□□□ -0.39
CSGALNACT1-211ENST00000522854 PSG2P11465 335 aa12.64□□□□□ -0.39
CSGALNACT1-211ENST00000522854 SELLP14151 372 aa12.64□□□□□ -0.39
CSGALNACT1-211ENST00000522854 SMIM21Q3B7S5 101 aa12.64□□□□□ -0.39
CSGALNACT1-211ENST00000522854 RNASE10Q5GAN6 216 aaKnown RBP12.64□□□□□ -0.39
CSGALNACT1-211ENST00000522854 MEX3BQ6ZN04 569 aaKnown RBP12.64□□□□□ -0.39
CSGALNACT1-211ENST00000522854 TPRX1Q8N7U7 411 aa12.64□□□□□ -0.39
CSGALNACT1-211ENST00000522854 CCDC107Q8WV48 283 aa12.64□□□□□ -0.39
CSGALNACT1-211ENST00000522854 CCL17Q92583 94 aa12.64□□□□□ -0.39
CSGALNACT1-211ENST00000522854 MRGPRFQ96AM1 343 aa12.64□□□□□ -0.39
CSGALNACT1-211ENST00000522854 C7orf50Q9BRJ6 194 aaKnown RBP12.64□□□□□ -0.39
CSGALNACT1-211ENST00000522854 C20orf85Q9H1P6 137 aa12.64□□□□□ -0.39
CSGALNACT1-211ENST00000522854 C12orf4Q9NQ89 552 aa12.64□□□□□ -0.39
CSGALNACT1-211ENST00000522854 DNAJB11Q9UBS4 358 aa12.64□□□□□ -0.39
CSGALNACT1-211ENST00000522854 SH2D1BO14796 132 aa12.63□□□□□ -0.39
CSGALNACT1-211ENST00000522854 CD8AP01732 235 aa12.63□□□□□ -0.39
CSGALNACT1-211ENST00000522854 NAT1P18440 290 aa12.63□□□□□ -0.39
CSGALNACT1-211ENST00000522854 COL10A1Q03692 680 aa12.63□□□□□ -0.39
CSGALNACT1-211ENST00000522854 SPIN3Q5JUX0 258 aa12.63□□□□□ -0.39
CSGALNACT1-211ENST00000522854 IDO2Q6ZQW0 420 aa12.63□□□□□ -0.39
CSGALNACT1-211ENST00000522854 LINC00596Q86U02 117 aa12.63□□□□□ -0.39
CSGALNACT1-211ENST00000522854 UBALD1Q8TB05 177 aa12.63□□□□□ -0.39
CSGALNACT1-211ENST00000522854 NBPF19A0A087WUL8 3843 aa12.63□□□□□ -0.39
CSGALNACT1-211ENST00000522854 TMEM82A0PJX8 343 aa12.63□□□□□ -0.39
CSGALNACT1-211ENST00000522854 A1L4Q6 167 aa12.63□□□□□ -0.39
CSGALNACT1-211ENST00000522854 OR2AT4A6NND4 320 aa12.63□□□□□ -0.39
CSGALNACT1-211ENST00000522854 INMT-MINDY4F8WBC2 141 aa12.63□□□□□ -0.39
CSGALNACT1-211ENST00000522854 ARPC1BO15143 372 aaKnown RBP12.63□□□□□ -0.39
CSGALNACT1-211ENST00000522854 HNRNPCP07910 306 aaKnown RBP eCLIP12.63□□□□□ -0.39
CSGALNACT1-211ENST00000522854 CD55P08174 381 aa12.63□□□□□ -0.39
CSGALNACT1-211ENST00000522854 RCC1P18754 421 aaPredicted RBP12.63□□□□□ -0.39
CSGALNACT1-211ENST00000522854 GABRA2P47869 451 aa12.63□□□□□ -0.39
CSGALNACT1-211ENST00000522854 BCAP31P51572 246 aa12.63□□□□□ -0.39
CSGALNACT1-211ENST00000522854 CD300CQ08708 224 aa12.63□□□□□ -0.39
CSGALNACT1-211ENST00000522854 ARL6IP1Q15041 203 aa12.63□□□□□ -0.39
CSGALNACT1-211ENST00000522854 TATDN3Q17R31 274 aa12.63□□□□□ -0.39
CSGALNACT1-211ENST00000522854 GINS4Q9BRT9 223 aa12.63□□□□□ -0.39
CSGALNACT1-211ENST00000522854 MARVELD1Q9BSK0 173 aa12.63□□□□□ -0.39
CSGALNACT1-211ENST00000522854 TMPRSS13Q9BYE2 586 aa12.63□□□□□ -0.39
CSGALNACT1-211ENST00000522854 RHOFQ9HBH0 211 aa12.63□□□□□ -0.39
CSGALNACT1-211ENST00000522854 RNF7Q9UBF6 113 aa12.63□□□□□ -0.39
CSGALNACT1-211ENST00000522854 WIPI2Q9Y4P8 454 aa12.63□□□□□ -0.39
CSGALNACT1-211ENST00000522854 CELSR2Q9HCU4 2923 aa12.63□□□□□ -0.39
CSGALNACT1-211ENST00000522854 CA11O75493 328 aa12.62□□□□□ -0.39
CSGALNACT1-211ENST00000522854 NAPSAO96009 420 aa12.62□□□□□ -0.39
CSGALNACT1-211ENST00000522854 ADH4P08319 380 aa12.62□□□□□ -0.39
CSGALNACT1-211ENST00000522854 ANXA7P20073 488 aaKnown RBP12.62□□□□□ -0.39
CSGALNACT1-211ENST00000522854 FAUP35544 74 aaKnown RBP12.62□□□□□ -0.39
CSGALNACT1-211ENST00000522854 SNRPD2P62316 118 aaKnown RBP12.62□□□□□ -0.39
CSGALNACT1-211ENST00000522854 C17orf107Q6ZR85 190 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms