RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 CLDN34H7C241 214 aa14.54□□□□□ -0.08
CLK4-211ENST00000522556 MGST3O14880 152 aa14.54□□□□□ -0.08
CLK4-211ENST00000522556 ZNF728P0DKX0 622 aa14.54□□□□□ -0.08
CLK4-211ENST00000522556 SERPINA2P20848 420 aa14.54□□□□□ -0.08
CLK4-211ENST00000522556 GDNFP39905 211 aa14.54□□□□□ -0.08
CLK4-211ENST00000522556 RPS25P62851 125 aaKnown RBP14.54□□□□□ -0.08
CLK4-211ENST00000522556 RSU1Q15404 277 aa14.54□□□□□ -0.08
CLK4-211ENST00000522556 LDLRAD2Q5SZI1 272 aa14.54□□□□□ -0.08
CLK4-211ENST00000522556 UTF1Q5T230 341 aa14.54□□□□□ -0.08
CLK4-211ENST00000522556 LHFPL4Q7Z7J7 247 aa14.54□□□□□ -0.08
CLK4-211ENST00000522556 Q8NFD4 153 aa14.54□□□□□ -0.08
CLK4-211ENST00000522556 OR4D6Q8NGJ1 314 aa14.54□□□□□ -0.08
CLK4-211ENST00000522556 OR5D13Q8NGL4 314 aa14.54□□□□□ -0.08
CLK4-211ENST00000522556 GCDHQ92947 438 aaPredicted RBP14.54□□□□□ -0.08
CLK4-211ENST00000522556 TMEM203Q969S6 136 aa14.54□□□□□ -0.08
CLK4-211ENST00000522556 ZNF714Q96N38 554 aa14.54□□□□□ -0.08
CLK4-211ENST00000522556 ZNRD1Q9P1U0 126 aa14.54□□□□□ -0.08
CLK4-211ENST00000522556 TENM1Q9UKZ4 2725 aa14.54□□□□□ -0.08
CLK4-211ENST00000522556 DEGS1O15121 323 aa14.53□□□□□ -0.08
CLK4-211ENST00000522556 HSMCR30P0CW71 290 aa14.53□□□□□ -0.08
CLK4-211ENST00000522556 OMGP23515 440 aa14.53□□□□□ -0.08
CLK4-211ENST00000522556 EEF1B2P24534 225 aaKnown RBP14.53□□□□□ -0.08
CLK4-211ENST00000522556 TAF9Q16594 264 aa14.53□□□□□ -0.08
CLK4-211ENST00000522556 SLC22A6Q4U2R8 563 aa14.53□□□□□ -0.08
CLK4-211ENST00000522556 ACSM3Q53FZ2 586 aa14.53□□□□□ -0.08
CLK4-211ENST00000522556 UNQ9370/PRO34162Q6UXP9 181 aa14.53□□□□□ -0.08
CLK4-211ENST00000522556 PRSS48Q7RTY5 328 aa14.53□□□□□ -0.08
CLK4-211ENST00000522556 LDLRAD3Q86YD5 345 aa14.53□□□□□ -0.08
CLK4-211ENST00000522556 DYNAPQ8N1N2 210 aa14.53□□□□□ -0.08
CLK4-211ENST00000522556 JAGN1Q8N5M9 183 aa14.53□□□□□ -0.08
CLK4-211ENST00000522556 OR51T1Q8NGJ9 327 aa14.53□□□□□ -0.08
CLK4-211ENST00000522556 PLPPR1Q8TBJ4 325 aa14.53□□□□□ -0.08
CLK4-211ENST00000522556 SLC25A28Q96A46 364 aa14.53□□□□□ -0.08
CLK4-211ENST00000522556 CPNE2Q96FN4 548 aaPredicted RBP14.53□□□□□ -0.08
CLK4-211ENST00000522556 CKLFQ9UBR5 152 aa14.53□□□□□ -0.08
CLK4-211ENST00000522556 GLS2Q9UI32 602 aa14.53□□□□□ -0.08
CLK4-211ENST00000522556 FOXJ3Q9UPW0 622 aa14.53□□□□□ -0.08
CLK4-211ENST00000522556 LINC00312Q9Y6C7 94 aa14.53□□□□□ -0.08
CLK4-211ENST00000522556 FAM172BPA6NC97 362 aa14.52□□□□□ -0.09
CLK4-211ENST00000522556 FAM181BA6NEQ2 426 aa14.52□□□□□ -0.09
CLK4-211ENST00000522556 SC5DO75845 299 aa14.52□□□□□ -0.09
CLK4-211ENST00000522556 IGHV1-8P0DP01 117 aa14.52□□□□□ -0.09
CLK4-211ENST00000522556 IER3P46695 156 aa14.52□□□□□ -0.09
CLK4-211ENST00000522556 RBM11P57052 281 aaKnown RBP14.52□□□□□ -0.09
CLK4-211ENST00000522556 RELBQ01201 579 aa14.52□□□□□ -0.09
CLK4-211ENST00000522556 MEF2CQ06413 473 aaPredicted RBP14.52□□□□□ -0.09
CLK4-211ENST00000522556 AWAT1Q58HT5 328 aa14.52□□□□□ -0.09
CLK4-211ENST00000522556 PRAMEF5Q5TYX0 476 aa14.52□□□□□ -0.09
CLK4-211ENST00000522556 LRRTM1Q86UE6 522 aa14.52□□□□□ -0.09
CLK4-211ENST00000522556 KCNK15Q9H427 330 aa14.52□□□□□ -0.09
CLK4-211ENST00000522556 RHOFQ9HBH0 211 aa14.52□□□□□ -0.09
CLK4-211ENST00000522556 IL36GQ9NZH8 169 aa14.52□□□□□ -0.09
CLK4-211ENST00000522556 MRPS28Q9Y2Q9 187 aaKnown RBP14.52□□□□□ -0.09
CLK4-211ENST00000522556 FAM96BQ9Y3D0 163 aa14.52□□□□□ -0.09
CLK4-211ENST00000522556 TRAV39A0A0B4J263 110 aa14.51□□□□□ -0.09
CLK4-211ENST00000522556 hADV38S2A0JD32 116 aa14.51□□□□□ -0.09
CLK4-211ENST00000522556 ODAMA1E959 279 aa14.51□□□□□ -0.09
CLK4-211ENST00000522556 GEMIN2O14893 280 aaKnown RBP14.51□□□□□ -0.09
CLK4-211ENST00000522556 HKR1P10072 659 aa14.51□□□□□ -0.09
CLK4-211ENST00000522556 JUNBP17275 347 aaPredicted RBP14.51□□□□□ -0.09
CLK4-211ENST00000522556 IL13RA2Q14627 380 aa14.51□□□□□ -0.09
CLK4-211ENST00000522556 PAN3Q58A45 887 aaKnown RBP14.51□□□□□ -0.09
CLK4-211ENST00000522556 RBM48Q5RL73 367 aaKnown RBP14.51□□□□□ -0.09
CLK4-211ENST00000522556 C16orf87Q6PH81 154 aa14.51□□□□□ -0.09
CLK4-211ENST00000522556 BRICD5Q6PL45 260 aa14.51□□□□□ -0.09
CLK4-211ENST00000522556 TMEM91Q6ZNR0 172 aa14.51□□□□□ -0.09
CLK4-211ENST00000522556 TRAPPC6BQ86SZ2 158 aa14.51□□□□□ -0.09
CLK4-211ENST00000522556 SSMEM1Q8WWF3 244 aa14.51□□□□□ -0.09
CLK4-211ENST00000522556 UFD1Q92890 307 aa14.51□□□□□ -0.09
CLK4-211ENST00000522556 METTL9Q9H1A3 318 aa14.51□□□□□ -0.09
CLK4-211ENST00000522556 ZMAT3Q9HA38 289 aaKnown RBP14.51□□□□□ -0.09
CLK4-211ENST00000522556 ST3GAL6Q9Y274 331 aa14.51□□□□□ -0.09
CLK4-211ENST00000522556 SF3B6Q9Y3B4 125 aaKnown RBP14.51□□□□□ -0.09
CLK4-211ENST00000522556 A0A1W2PPH5 198 aa14.5□□□□□ -0.09
CLK4-211ENST00000522556 ODF3BA8MYP8 253 aa14.5□□□□□ -0.09
CLK4-211ENST00000522556 CLPXO76031 633 aa14.5□□□□□ -0.09
CLK4-211ENST00000522556 CSN2P05814 226 aa14.5□□□□□ -0.09
CLK4-211ENST00000522556 FBP1P09467 338 aa14.5□□□□□ -0.09
CLK4-211ENST00000522556 ERP29P30040 261 aaKnown RBP14.5□□□□□ -0.09
CLK4-211ENST00000522556 TPBGQ13641 420 aa14.5□□□□□ -0.09
CLK4-211ENST00000522556 SSX1Q16384 188 aa14.5□□□□□ -0.09
CLK4-211ENST00000522556 KRBOX4Q5JUW0 171 aa14.5□□□□□ -0.09
CLK4-211ENST00000522556 GLIPR1L1Q6UWM5 242 aa14.5□□□□□ -0.09
CLK4-211ENST00000522556 C12orf54Q6X4T0 127 aa14.5□□□□□ -0.09
CLK4-211ENST00000522556 CEACAM19Q7Z692 300 aa14.5□□□□□ -0.09
CLK4-211ENST00000522556 OSR2Q8N2R0 312 aa14.5□□□□□ -0.09
CLK4-211ENST00000522556 CHST4Q8NCG5 386 aa14.5□□□□□ -0.09
CLK4-211ENST00000522556 TMEM104Q8NE00 496 aa14.5□□□□□ -0.09
CLK4-211ENST00000522556 PPP1R35Q8TAP8 253 aa14.5□□□□□ -0.09
CLK4-211ENST00000522556 TBC1D15Q8TC07 691 aa14.5□□□□□ -0.09
CLK4-211ENST00000522556 BANF2Q9H503 90 aa14.5□□□□□ -0.09
CLK4-211ENST00000522556 KIF25Q9UIL4 384 aa14.5□□□□□ -0.09
CLK4-211ENST00000522556 MDKP21741 143 aaPredicted RBP14.49□□□□□ -0.09
CLK4-211ENST00000522556 MAPK3P27361 379 aaPredicted RBP14.49□□□□□ -0.09
CLK4-211ENST00000522556 COMPP49747 757 aaPredicted RBP14.49□□□□□ -0.09
CLK4-211ENST00000522556 MLLT11Q13015 90 aaPredicted RBP14.49□□□□□ -0.09
CLK4-211ENST00000522556 TBCEQ15813 527 aaPredicted RBP14.49□□□□□ -0.09
CLK4-211ENST00000522556 C17orf58Q2M2W7 97 aa14.49□□□□□ -0.09
CLK4-211ENST00000522556 PLA1AQ53H76 456 aa14.49□□□□□ -0.09
CLK4-211ENST00000522556 RSBN1Q5VWQ0 802 aaPredicted RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms