RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 TBX5Q99593 518 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 DOK1Q99704 481 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 ATF6BQ99941 703 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 ZNF649Q9BS31 505 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 COPS4Q9BT78 406 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 MROQ9BYG7 248 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 YTHDF1Q9BYJ9 559 aaKnown RBP2.6□□□□□ -1.99
VPS13B-209ENST00000521559 DUSP21Q9H596 190 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 PLEKHF2Q9H8W4 249 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 CA10Q9NS85 328 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 FKBP14Q9NWM8 211 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 SLCO1C1Q9NYB5 712 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 UBAP1Q9NZ09 502 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 CNOT2Q9NZN8 540 aaKnown RBP2.6□□□□□ -1.99
VPS13B-209ENST00000521559 MRM2Q9UI43 246 aaKnown RBP2.6□□□□□ -1.99
VPS13B-209ENST00000521559 IKZF2Q9UKS7 526 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 DIMT1Q9UNQ2 313 aaKnown RBP2.6□□□□□ -1.99
VPS13B-209ENST00000521559 STARD10Q9Y365 291 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 EXOSC1Q9Y3B2 195 aaKnown RBP2.6□□□□□ -1.99
VPS13B-209ENST00000521559 TPRKBQ9Y3C4 175 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 IGSF10Q6WRI0 2623 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 ESPL1Q14674 2120 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 ASPMQ8IZT6 3477 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 LOC400499M0QZD8 3231 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 KIAA1549Q9HCM3 1950 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 ZZEF1O43149 2961 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 SVILO95425 2214 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 IGLV3-9A0A075B6K5 115 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 A0A0U1RQV5 110 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 TMEM269A0A1B0GVZ9 245 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 C5orf63A6NC05 138 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 LOC110117498-PIK3R3F6TDL0 507 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 J3QLW9 94 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 M0R135 149 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 SLC1A7O00341 560 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 MAGEB4O15481 346 aaPredicted RBP2.59□□□□□ -1.99
VPS13B-209ENST00000521559 ST8SIA3O43173 380 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 XRCC2O43543 280 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 GPRIN2O60269 458 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 MRPS14O60783 128 aaKnown RBP2.59□□□□□ -1.99
VPS13B-209ENST00000521559 SRSF10O75494 262 aaKnown RBP2.59□□□□□ -1.99
VPS13B-209ENST00000521559 RPP14O95059 124 aaKnown RBP2.59□□□□□ -1.99
VPS13B-209ENST00000521559 PNPP00491 289 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 CD8AP01732 235 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 IGHV3-13P01766 116 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 CDK1P06493 297 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 SOD3P08294 240 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 ADRA2AP08913 450 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 LIMS3P0CW19 117 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 LIMS4P0CW20 117 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 SLC2A1P11166 492 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 ZNF250P15622 560 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 SELEP16581 610 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 ZNF19P17023 458 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 RPL35AP18077 110 aaKnown RBP2.59□□□□□ -1.99
VPS13B-209ENST00000521559 MYL12AP19105 171 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 KITLGP21583 273 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 CFL1P23528 166 aaKnown RBP2.59□□□□□ -1.99
VPS13B-209ENST00000521559 GATA2P23769 480 aaPredicted RBP2.59□□□□□ -1.99
VPS13B-209ENST00000521559 CRHBPP24387 322 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 HSD11B1P28845 292 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 MPV17P39210 176 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 TGM4P49221 684 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 CX3CR1P49238 355 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 ETV1P50549 477 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 GBX2P52951 348 aaPredicted RBP2.59□□□□□ -1.99
VPS13B-209ENST00000521559 OR12D2P58182 307 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 ERVS71-1P61550 626 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 ACTA2P62736 377 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 ACTG2P63267 376 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 SLC35A2P78381 396 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 ST3GAL4Q11206 333 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 PSG7Q13046 419 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 MRPL28Q13084 256 aaKnown RBP2.59□□□□□ -1.99
VPS13B-209ENST00000521559 MOGQ16653 247 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 ZNF829Q3KNS6 432 aaPredicted RBP2.59□□□□□ -1.99
VPS13B-209ENST00000521559 TP53I3Q53FA7 332 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 TCTEX1D4Q5JR98 221 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 GLYATL3Q5SZD4 288 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 LIPNQ5VXI9 398 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 RNLSQ5VYX0 342 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 FBXW12Q6X9E4 464 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 TMPRSS11AQ6ZMR5 421 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 Q6ZSR3 168 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 RFPL4BQ6ZWI9 263 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 AHSA2Q719I0 299 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 PRSS48Q7RTY5 328 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 MRPL21Q7Z2W9 205 aaKnown RBP2.59□□□□□ -1.99
VPS13B-209ENST00000521559 FAM220AQ7Z4H9 259 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 LHFPL3Q86UP9 236 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 ELMOD2Q8IZ81 293 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 ZNF101Q8IZC7 436 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 SYS1Q8N2H4 156 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 MUC15Q8N387 334 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 ZNF786Q8N393 782 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 STX19Q8N4C7 294 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 FAM89BQ8N5H3 189 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 YIPF7Q8N8F6 280 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 ZNF540Q8NDQ6 660 aa2.59□□□□□ -1.99
VPS13B-209ENST00000521559 OR8B12Q8NGG6 310 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms