RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 AUNIPQ9H7T9 357 aa4.8□□□□□ -1.64
CTNNA1-220ENST00000520260 BEX1Q9HBH7 125 aa4.8□□□□□ -1.64
CTNNA1-220ENST00000520260 PNRC2Q9NPJ4 139 aaKnown RBP4.8□□□□□ -1.64
CTNNA1-220ENST00000520260 TAS2R8Q9NYW2 309 aa4.8□□□□□ -1.64
CTNNA1-220ENST00000520260 ZNF69Q9UC07 566 aa4.8□□□□□ -1.64
CTNNA1-220ENST00000520260 MLXQ9UH92 298 aa4.8□□□□□ -1.64
CTNNA1-220ENST00000520260 OR52A1Q9UKL2 312 aa4.8□□□□□ -1.64
CTNNA1-220ENST00000520260 FZR1Q9UM11 496 aa4.8□□□□□ -1.64
CTNNA1-220ENST00000520260 FLVCR2Q9UPI3 526 aa4.8□□□□□ -1.64
CTNNA1-220ENST00000520260 DHDHQ9UQ10 334 aa4.8□□□□□ -1.64
CTNNA1-220ENST00000520260 MRPS7Q9Y2R9 242 aaKnown RBP4.8□□□□□ -1.64
CTNNA1-220ENST00000520260 ETV7Q9Y603 341 aa4.8□□□□□ -1.64
CTNNA1-220ENST00000520260 ABCA4P78363 2273 aa4.8□□□□□ -1.64
CTNNA1-220ENST00000520260 SETXQ7Z333 2677 aaKnown RBP4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 TRBV2A0A0J9YWF9 115 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 hCG_1809904A0A1W2PP81 198 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 A0A1W2PPE2 198 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 A0A1W2PR64 198 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 A0A1W2PRV1 198 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 TMEM82A0PJX8 343 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 LRP5LA4QPB2 252 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 B4DSR2 109 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 ZNF879B4DU55 563 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 ARPC5O15511 151 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 FOXH1O75593 365 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 ATG12O94817 140 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 OR2F2O95006 317 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 GPANK1O95872 356 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 PLATP00750 562 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 NRASP01111 189 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 NGFP01138 241 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 IFNA2P01563 188 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 CD8AP01732 235 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 IGHV1-46P01743 117 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 IGHV4-39P01824 125 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 ISG15P05161 165 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 FCER2P06734 321 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 SMIM6P0DI80 62 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 VSIG10L2P0DP72 767 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 SLC25A4P12235 298 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 FOLR2P14207 255 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 RPL35P42766 123 aaKnown RBP4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 GATA4P43694 442 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 FUT6P51993 359 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 ATP1B3P54709 279 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 RPS11P62280 158 aaKnown RBP eCLIP4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 POLR2GP62487 172 aaKnown RBP eCLIP4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 ZNF92Q03936 586 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 SSBP1Q04837 148 aaKnown RBP4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 LOXL1Q08397 574 aaPredicted RBP4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 OR2F1Q13607 317 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 ZNF345Q14585 488 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 RBMS2Q15434 407 aaKnown RBP4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 OR8B8Q15620 311 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 SMIM21Q3B7S5 101 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 CEACAM21Q3KPI0 293 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 TMEM155Q4W5P6 130 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 RNASE12Q5GAN4 147 aaKnown RBP4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 TMEM255AQ5JRV8 349 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 GLYATL3Q5SZD4 288 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 LIPNQ5VXI9 398 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 PLCXD3Q63HM9 321 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 CYB5R2Q6BCY4 276 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 OR2T2Q6IF00 324 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 FAM166AQ6J272 317 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 FDX2Q6P4F2 183 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 BTNL3Q6UXE8 466 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 C17orf107Q6ZR85 190 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 LHFPL2Q6ZUX7 228 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 PRSS45Q7RTY3 260 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 MYPOPQ86VE0 399 aaPredicted RBP4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 LSRQ86X29 649 aaPredicted RBP4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 FAM90A1Q86YD7 464 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 SERPINA12Q8IW75 414 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 MKXQ8IYA7 352 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 OR5AS1Q8N127 324 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 SVBPQ8N300 66 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 PAQR4Q8N4S7 273 aaPredicted RBP4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 KCNRGQ8N5I3 272 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 ZSCAN4Q8NAM6 433 aaPredicted RBP4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 BPIFCQ8NFQ6 507 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 OR56B2PQ8NGI1 322 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 OR13C3Q8NGS6 347 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 OR51F2Q8NH61 342 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 PPP1R35Q8TAP8 253 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 C10orf105Q8TEF2 133 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 GHSRQ92847 366 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 SLC25A38Q96DW6 304 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 SMIM19Q96E16 107 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 BORCS8Q96FH0 119 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 NARS2Q96I59 477 aaKnown RBP4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 FAM71F1Q96KD3 344 aaPredicted RBP4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 C4orf36Q96KX1 117 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 MFFQ9GZY8 342 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 GPR84Q9NQS5 396 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 TMEM106BQ9NUM4 274 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 FAM206AQ9NX38 181 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 RNF7Q9UBF6 113 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 DNAJB11Q9UBS4 358 aa4.79□□□□□ -1.64
CTNNA1-220ENST00000520260 MIOXQ9UGB7 285 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms