RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 TRAM1Q15629 374 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 ATP6AP1Q15904 470 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 DUSP7Q16829 419 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 NSUN5P1Q3KNT7 163 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 TMEM97Q5BJF2 176 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 SAXO2Q658L1 398 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 TNFAIP8L2Q6P589 184 aaPredicted RBP2.39□□□□□ -2.03
VPS13B-207ENST00000518569 WDR82Q6UXN9 313 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 OLIG3Q7RTU3 272 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 RALGPS2Q86X27 583 aaPredicted RBP2.39□□□□□ -2.03
VPS13B-207ENST00000518569 ANGPTL5Q86XS5 388 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 C10orf107Q8IVU9 208 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 LRRC25Q8N386 305 aaPredicted RBP2.39□□□□□ -2.03
VPS13B-207ENST00000518569 FTMTQ8N4E7 242 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 LRRC52Q8N7C0 313 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 CLDN22Q8N7P3 220 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 WDR31Q8NA23 367 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 OR4F15Q8NGB8 312 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 OR13G1Q8NGZ3 307 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 OR51F2Q8NH61 342 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 ZNF502Q8TBZ5 544 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 TNFAIP8L1Q8WVP5 186 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 C11orf40Q8WZ69 217 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 NDRG1Q92597 394 aaKnown RBP2.39□□□□□ -2.03
VPS13B-207ENST00000518569 TMEM203Q969S6 136 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 TBX15Q96SF7 602 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 GPR22Q99680 433 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 KCTD14Q9BQ13 255 aaPredicted RBP2.39□□□□□ -2.03
VPS13B-207ENST00000518569 FAIM2Q9BWQ8 316 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 ARV1Q9H2C2 271 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 SPNS1Q9H2V7 528 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 RBKSQ9H477 322 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 FAM96AQ9H5X1 160 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 SIAEQ9HAT2 523 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 AGPAT4Q9NRZ5 378 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 CD84Q9UIB8 345 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 LSM7Q9UK45 103 aaKnown RBP2.39□□□□□ -2.03
VPS13B-207ENST00000518569 SLC7A11Q9UPY5 501 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 KCNIP3Q9Y2W7 256 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 V9GY05 133 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 ARHGEF5Q12774 1597 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 ARHGEF28Q8N1W1 1705 aaKnown RBP2.39□□□□□ -2.03
VPS13B-207ENST00000518569 CCDC88AQ3V6T2 1871 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 PRRC2AP48634 2157 aaKnown RBP2.39□□□□□ -2.03
VPS13B-207ENST00000518569 COL14A1Q05707 1796 aaKnown RBP2.38□□□□□ -2.03
VPS13B-207ENST00000518569 PIK3C2AO00443 1686 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 KIF1BO60333 1816 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 A0A1B0GUS0 222 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 ISPDA4D126 451 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 CLDN24A6NM45 220 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 CCL21O00585 134 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 KPNA4O00629 521 aaPredicted RBP2.38□□□□□ -2.03
VPS13B-207ENST00000518569 CA11O75493 328 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 CNMDO75829 334 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 C1orf105O95561 183 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 CLIC3O95833 236 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 MT-CO2P00403 227 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 CATP04040 527 aaKnown RBP2.38□□□□□ -2.03
VPS13B-207ENST00000518569 PCCAP05165 728 aaPredicted RBP2.38□□□□□ -2.03
VPS13B-207ENST00000518569 IGHV4-34P06331 123 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 MRPL3P09001 348 aaKnown RBP2.38□□□□□ -2.03
VPS13B-207ENST00000518569 RBP1P09455 135 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 TFPTP0C1Z6 253 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 ACSM4P0C7M7 580 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 SMIM6P0DI80 62 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 OR13C7P0DN81 318 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 AKR1C4P17516 323 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 TCP1P17987 556 aaKnown RBP2.38□□□□□ -2.03
VPS13B-207ENST00000518569 RPS12P25398 132 aaKnown RBP2.38□□□□□ -2.03
VPS13B-207ENST00000518569 NOS1P29475 1434 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 ADORA1P30542 326 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 SERPINB5P36952 375 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 IFNGR2P38484 337 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 DDOSTP39656 456 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 DCCP43146 1447 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 GCLMP48507 274 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 HLCSP50747 726 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 CRYBA4P53673 196 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 SNAP25P60880 206 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 RPS14P62263 151 aaKnown RBP2.38□□□□□ -2.03
VPS13B-207ENST00000518569 SELENOTP62341 195 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 DYNLL1P63167 89 aaKnown RBP2.38□□□□□ -2.03
VPS13B-207ENST00000518569 PAFAH1B2P68402 229 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 PSPHP78330 225 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 SLC7A9P82251 487 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 ACVR1Q04771 509 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 ZNF763Q0D2J5 394 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 VGLL4Q14135 290 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 ZNF235Q14590 738 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 LTBP1Q14766 1721 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 PRSS8Q16651 343 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 SLC25A35Q3KQZ1 300 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 OR10J3Q5JRS4 329 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 C1orf100Q5SVJ3 147 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 TNS2Q63HR2 1409 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 MBOAT1Q6ZNC8 495 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 Q6ZSR3 168 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 C6orf120Q7Z4R8 191 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 S100A7AQ86SG5 101 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 TMEM135Q86UB9 458 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms