RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 AMIGO2Q86SJ2 522 aa11.65□□□□□ -0.54
SCARNA20.5-201ENST00000516991 BCAS4Q8TDM0 211 aa11.65□□□□□ -0.54
SCARNA20.5-201ENST00000516991 RNF166Q96A37 237 aaPredicted RBP11.65□□□□□ -0.54
SCARNA20.5-201ENST00000516991 RFT1Q96AA3 541 aa11.65□□□□□ -0.54
SCARNA20.5-201ENST00000516991 MRPL48Q96GC5 212 aaKnown RBP11.65□□□□□ -0.54
SCARNA20.5-201ENST00000516991 ZNF286AQ9HBT8 521 aa11.65□□□□□ -0.54
SCARNA20.5-201ENST00000516991 OR6C3Q9NZP0 311 aa11.65□□□□□ -0.54
SCARNA20.5-201ENST00000516991 AMMECR1Q9Y4X0 333 aaPredicted RBP11.65□□□□□ -0.54
SCARNA20.5-201ENST00000516991 DNAH3Q8TD57 4116 aa11.65□□□□□ -0.54
SCARNA20.5-201ENST00000516991 IGKV1-12A0A0C4DH73 117 aa11.64□□□□□ -0.55
SCARNA20.5-201ENST00000516991 BUB1B-PAK6H3BSN5 160 aa11.64□□□□□ -0.55
SCARNA20.5-201ENST00000516991 SLC16A6O15403 523 aa11.64□□□□□ -0.55
SCARNA20.5-201ENST00000516991 IGKV1D-12P01611 117 aa11.64□□□□□ -0.55
SCARNA20.5-201ENST00000516991 RPSAP08865 295 aaKnown RBP11.64□□□□□ -0.55
SCARNA20.5-201ENST00000516991 HTR1AP08908 422 aa11.64□□□□□ -0.55
SCARNA20.5-201ENST00000516991 CD24P25063 80 aa11.64□□□□□ -0.55
SCARNA20.5-201ENST00000516991 POLR2IP36954 125 aaKnown RBP11.64□□□□□ -0.55
SCARNA20.5-201ENST00000516991 GLIPR1P48060 266 aa11.64□□□□□ -0.55
SCARNA20.5-201ENST00000516991 AESQ08117 197 aa11.64□□□□□ -0.55
SCARNA20.5-201ENST00000516991 KRBOX4Q5JUW0 171 aa11.64□□□□□ -0.55
SCARNA20.5-201ENST00000516991 BAIAP2L2Q6UXY1 529 aa11.64□□□□□ -0.55
SCARNA20.5-201ENST00000516991 OSR2Q8N2R0 312 aa11.64□□□□□ -0.55
SCARNA20.5-201ENST00000516991 OR13C3Q8NGS6 347 aa11.64□□□□□ -0.55
SCARNA20.5-201ENST00000516991 OR13C9Q8NGT0 318 aa11.64□□□□□ -0.55
SCARNA20.5-201ENST00000516991 TRUB1Q8WWH5 349 aaKnown RBP11.64□□□□□ -0.55
SCARNA20.5-201ENST00000516991 DPF1Q92782 380 aa11.64□□□□□ -0.55
SCARNA20.5-201ENST00000516991 CENPNQ96H22 339 aaPredicted RBP11.64□□□□□ -0.55
SCARNA20.5-201ENST00000516991 MYCBPQ99417 103 aaPredicted RBP11.64□□□□□ -0.55
SCARNA20.5-201ENST00000516991 FRRS1LQ9P0K9 344 aa11.64□□□□□ -0.55
SCARNA20.5-201ENST00000516991 OAZ3Q9UMX2 235 aa11.64□□□□□ -0.55
SCARNA20.5-201ENST00000516991 MOB4Q9Y3A3 225 aa11.64□□□□□ -0.55
SCARNA20.5-201ENST00000516991 HSPE1-MOB4S4R3N1 261 aa11.64□□□□□ -0.55
SCARNA20.5-201ENST00000516991 DAPL1A0PJW8 107 aa11.63□□□□□ -0.55
SCARNA20.5-201ENST00000516991 FAM172BPA6NC97 362 aa11.63□□□□□ -0.55
SCARNA20.5-201ENST00000516991 FAM106CPP0CH98 169 aa11.63□□□□□ -0.55
SCARNA20.5-201ENST00000516991 DBTP11182 482 aaKnown RBP11.63□□□□□ -0.55
SCARNA20.5-201ENST00000516991 RASSF2P50749 326 aa11.63□□□□□ -0.55
SCARNA20.5-201ENST00000516991 C1orf146Q5VVC0 180 aa11.63□□□□□ -0.55
SCARNA20.5-201ENST00000516991 OR51D1Q8NGF3 324 aa11.63□□□□□ -0.55
SCARNA20.5-201ENST00000516991 OR5D18Q8NGL1 313 aa11.63□□□□□ -0.55
SCARNA20.5-201ENST00000516991 TOMM40LQ969M1 308 aa11.63□□□□□ -0.55
SCARNA20.5-201ENST00000516991 RPEQ96AT9 228 aa11.63□□□□□ -0.55
SCARNA20.5-201ENST00000516991 COQ2Q96H96 371 aa11.63□□□□□ -0.55
SCARNA20.5-201ENST00000516991 SNTNA6NMZ2 147 aa11.62□□□□□ -0.55
SCARNA20.5-201ENST00000516991 E9PQ18 207 aa11.62□□□□□ -0.55
SCARNA20.5-201ENST00000516991 LY6LH3BQJ8 138 aa11.62□□□□□ -0.55
SCARNA20.5-201ENST00000516991 K7EIL1 84 aa11.62□□□□□ -0.55
SCARNA20.5-201ENST00000516991 SLC33A1O00400 549 aaPredicted RBP11.62□□□□□ -0.55
SCARNA20.5-201ENST00000516991 AMY1AP04745 511 aa11.62□□□□□ -0.55
SCARNA20.5-201ENST00000516991 AMY2AP04746 511 aa11.62□□□□□ -0.55
SCARNA20.5-201ENST00000516991 GDNFP39905 211 aa11.62□□□□□ -0.55
SCARNA20.5-201ENST00000516991 OR3A4PP47883 348 aa11.62□□□□□ -0.55
SCARNA20.5-201ENST00000516991 NANOS3P60323 173 aaKnown RBP11.62□□□□□ -0.55
SCARNA20.5-201ENST00000516991 SCN1BQ07699 218 aa11.62□□□□□ -0.55
SCARNA20.5-201ENST00000516991 RBM39Q14498 530 aaKnown RBP11.62□□□□□ -0.55
SCARNA20.5-201ENST00000516991 ATXN7L3Q14CW9 347 aaPredicted RBP11.62□□□□□ -0.55
SCARNA20.5-201ENST00000516991 C9orf152Q5JTZ5 239 aa11.62□□□□□ -0.55
SCARNA20.5-201ENST00000516991 VAX1Q5SQQ9 334 aa11.62□□□□□ -0.55
SCARNA20.5-201ENST00000516991 SLC25A30Q5SVS4 291 aa11.62□□□□□ -0.55
SCARNA20.5-201ENST00000516991 MEDAGQ5VYS4 303 aa11.62□□□□□ -0.55
SCARNA20.5-201ENST00000516991 Q6P435 159 aa11.62□□□□□ -0.55
SCARNA20.5-201ENST00000516991 THNSL2Q86YJ6 484 aa11.62□□□□□ -0.55
SCARNA20.5-201ENST00000516991 ACBD7Q8N6N7 88 aa11.62□□□□□ -0.55
SCARNA20.5-201ENST00000516991 OR9G1Q8NH87 305 aa11.62□□□□□ -0.55
SCARNA20.5-201ENST00000516991 RNFT2Q96EX2 444 aa11.62□□□□□ -0.55
SCARNA20.5-201ENST00000516991 CPNE2Q96FN4 548 aaPredicted RBP11.62□□□□□ -0.55
SCARNA20.5-201ENST00000516991 SPACA5Q96QH8 159 aa11.62□□□□□ -0.55
SCARNA20.5-201ENST00000516991 ZCCHC4Q9H5U6 513 aa11.62□□□□□ -0.55
SCARNA20.5-201ENST00000516991 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.62□□□□□ -0.55
SCARNA20.5-201ENST00000516991 ORC6Q9Y5N6 252 aa11.62□□□□□ -0.55
SCARNA20.5-201ENST00000516991 KBTBD11-OT1A0A1B0GTJ5 212 aa11.61□□□□□ -0.55
SCARNA20.5-201ENST00000516991 PSMB11A5LHX3 300 aa11.61□□□□□ -0.55
SCARNA20.5-201ENST00000516991 OR4C45A6NMZ5 311 aa11.61□□□□□ -0.55
SCARNA20.5-201ENST00000516991 J3QRE1 110 aa11.61□□□□□ -0.55
SCARNA20.5-201ENST00000516991 DEGS1O15121 323 aa11.61□□□□□ -0.55
SCARNA20.5-201ENST00000516991 NFYBP25208 207 aa11.61□□□□□ -0.55
SCARNA20.5-201ENST00000516991 SLC6A1P30531 599 aa11.61□□□□□ -0.55
SCARNA20.5-201ENST00000516991 GLP1RP43220 463 aa11.61□□□□□ -0.55
SCARNA20.5-201ENST00000516991 MTNR1BP49286 362 aa11.61□□□□□ -0.55
SCARNA20.5-201ENST00000516991 EGFEM1PQ0D2K5 195 aa11.61□□□□□ -0.55
SCARNA20.5-201ENST00000516991 BNIP1Q12981 228 aa11.61□□□□□ -0.55
SCARNA20.5-201ENST00000516991 DCTN2Q13561 401 aaKnown RBP11.61□□□□□ -0.55
SCARNA20.5-201ENST00000516991 ALKBH1Q13686 389 aaKnown RBP11.61□□□□□ -0.55
SCARNA20.5-201ENST00000516991 LINC00482Q8N8I6 264 aa11.61□□□□□ -0.55
SCARNA20.5-201ENST00000516991 OR51T1Q8NGJ9 327 aa11.61□□□□□ -0.55
SCARNA20.5-201ENST00000516991 OR10AC1Q8NH08 325 aa11.61□□□□□ -0.55
SCARNA20.5-201ENST00000516991 PELI1Q96FA3 418 aa11.61□□□□□ -0.55
SCARNA20.5-201ENST00000516991 KIRREL1Q96J84 757 aa11.61□□□□□ -0.55
SCARNA20.5-201ENST00000516991 NCOR1P1Q9H4R4 102 aa11.61□□□□□ -0.55
SCARNA20.5-201ENST00000516991 INPP5EQ9NRR6 644 aa11.61□□□□□ -0.55
SCARNA20.5-201ENST00000516991 MYRFQ9Y2G1 1151 aa11.61□□□□□ -0.55
SCARNA20.5-201ENST00000516991 SAC3D1A6NKF1 404 aa11.6□□□□□ -0.55
SCARNA20.5-201ENST00000516991 J3QLW9 94 aa11.6□□□□□ -0.55
SCARNA20.5-201ENST00000516991 SULT1B1O43704 296 aa11.6□□□□□ -0.55
SCARNA20.5-201ENST00000516991 HCKP08631 526 aa11.6□□□□□ -0.55
SCARNA20.5-201ENST00000516991 TMEM225BP0DP42 221 aa11.6□□□□□ -0.55
SCARNA20.5-201ENST00000516991 ZNF19P17023 458 aa11.6□□□□□ -0.55
SCARNA20.5-201ENST00000516991 ZP1P60852 638 aa11.6□□□□□ -0.55
SCARNA20.5-201ENST00000516991 SNRPGP62308 76 aaKnown RBP11.6□□□□□ -0.55
SCARNA20.5-201ENST00000516991 MADCAM1Q13477 382 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms