RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 B9A039 149 aa6.44□□□□□ -1.38
SCARNA20.1-201ENST00000516009 C3orf80F5H4A9 247 aa6.44□□□□□ -1.38
SCARNA20.1-201ENST00000516009 PYCARD-AS1I3L0S3 204 aa6.44□□□□□ -1.38
SCARNA20.1-201ENST00000516009 SLC33A1O00400 549 aaPredicted RBP6.44□□□□□ -1.38
SCARNA20.1-201ENST00000516009 WNT9BO14905 357 aa6.44□□□□□ -1.38
SCARNA20.1-201ENST00000516009 SIAH2O43255 324 aa6.44□□□□□ -1.38
SCARNA20.1-201ENST00000516009 PRAF2O60831 178 aa6.44□□□□□ -1.38
SCARNA20.1-201ENST00000516009 OR2H2O95918 312 aa6.44□□□□□ -1.38
SCARNA20.1-201ENST00000516009 HAND1O96004 215 aa6.44□□□□□ -1.38
SCARNA20.1-201ENST00000516009 NAPSAO96009 420 aa6.44□□□□□ -1.38
SCARNA20.1-201ENST00000516009 PLAUP00749 431 aa6.44□□□□□ -1.38
SCARNA20.1-201ENST00000516009 RLN1P04808 185 aa6.44□□□□□ -1.38
SCARNA20.1-201ENST00000516009 CD55P08174 381 aa6.44□□□□□ -1.38
SCARNA20.1-201ENST00000516009 ADH4P08319 380 aa6.44□□□□□ -1.38
SCARNA20.1-201ENST00000516009 IRF2P14316 349 aa6.44□□□□□ -1.38
SCARNA20.1-201ENST00000516009 TNFRSF1AP19438 455 aa6.44□□□□□ -1.38
SCARNA20.1-201ENST00000516009 CFHR2P36980 270 aa6.44□□□□□ -1.38
SCARNA20.1-201ENST00000516009 MDH2P40926 338 aaKnown RBP6.44□□□□□ -1.38
SCARNA20.1-201ENST00000516009 ARPC4P59998 168 aa6.44□□□□□ -1.38
SCARNA20.1-201ENST00000516009 TSPAN5P62079 268 aa6.44□□□□□ -1.38
SCARNA20.1-201ENST00000516009 CDK10Q15131 360 aa6.44□□□□□ -1.38
SCARNA20.1-201ENST00000516009 EFNB3Q15768 340 aa6.44□□□□□ -1.38
SCARNA20.1-201ENST00000516009 GRK1Q15835 563 aa6.44□□□□□ -1.38
SCARNA20.1-201ENST00000516009 SRSF7Q16629 238 aaKnown RBP eCLIP6.44□□□□□ -1.38
SCARNA20.1-201ENST00000516009 SPRNQ5BIV9 151 aa6.44□□□□□ -1.38
SCARNA20.1-201ENST00000516009 FAM209AQ5JX71 171 aa6.44□□□□□ -1.38
SCARNA20.1-201ENST00000516009 SHEQ5VZ18 495 aa6.44□□□□□ -1.38
SCARNA20.1-201ENST00000516009 FAM90A1Q86YD7 464 aa6.44□□□□□ -1.38
SCARNA20.1-201ENST00000516009 BOLLQ8N9W6 283 aaKnown RBP6.44□□□□□ -1.38
SCARNA20.1-201ENST00000516009 OR13C8Q8NGS7 320 aa6.44□□□□□ -1.38
SCARNA20.1-201ENST00000516009 CHAC2Q8WUX2 184 aa6.44□□□□□ -1.38
SCARNA20.1-201ENST00000516009 GIMAP1Q8WWP7 306 aa6.44□□□□□ -1.38
SCARNA20.1-201ENST00000516009 DACT3Q96B18 629 aaPredicted RBP6.44□□□□□ -1.38
SCARNA20.1-201ENST00000516009 PPP1R14BQ96C90 147 aa6.44□□□□□ -1.38
SCARNA20.1-201ENST00000516009 BBC3Q96PG8 261 aaPredicted RBP6.44□□□□□ -1.38
SCARNA20.1-201ENST00000516009 DHRS9Q9BPW9 319 aa6.44□□□□□ -1.38
SCARNA20.1-201ENST00000516009 TMEM204Q9BSN7 226 aa6.44□□□□□ -1.38
SCARNA20.1-201ENST00000516009 EGLN1Q9GZT9 426 aa6.44□□□□□ -1.38
SCARNA20.1-201ENST00000516009 WDR13Q9H1Z4 485 aa6.44□□□□□ -1.38
SCARNA20.1-201ENST00000516009 PPA2Q9H2U2 334 aa6.44□□□□□ -1.38
SCARNA20.1-201ENST00000516009 MS4A5Q9H3V2 200 aa6.44□□□□□ -1.38
SCARNA20.1-201ENST00000516009 CISD1Q9NZ45 108 aaKnown RBP6.44□□□□□ -1.38
SCARNA20.1-201ENST00000516009 EHFQ9NZC4 300 aa6.44□□□□□ -1.38
SCARNA20.1-201ENST00000516009 RNF7Q9UBF6 113 aa6.44□□□□□ -1.38
SCARNA20.1-201ENST00000516009 FLVCR2Q9UPI3 526 aa6.44□□□□□ -1.38
SCARNA20.1-201ENST00000516009 RAI1Q7Z5J4 1906 aaPredicted RBP6.44□□□□□ -1.38
SCARNA20.1-201ENST00000516009 IGKV1D-8A0A087WSZ0 117 aa6.43□□□□□ -1.38
SCARNA20.1-201ENST00000516009 A0A0A6YYJ9 748 aa6.43□□□□□ -1.38
SCARNA20.1-201ENST00000516009 KIR2DS1A0A191URI9 304 aa6.43□□□□□ -1.38
SCARNA20.1-201ENST00000516009 TMEM82A0PJX8 343 aa6.43□□□□□ -1.38
SCARNA20.1-201ENST00000516009 HMX3A6NHT5 357 aa6.43□□□□□ -1.38
SCARNA20.1-201ENST00000516009 LRRC30A6NM36 301 aa6.43□□□□□ -1.38
SCARNA20.1-201ENST00000516009 POM121CA8CG34 1229 aa6.43□□□□□ -1.38
SCARNA20.1-201ENST00000516009 H7C1Q1 480 aa6.43□□□□□ -1.38
SCARNA20.1-201ENST00000516009 IFNL4K9M1U5 179 aa6.43□□□□□ -1.38
SCARNA20.1-201ENST00000516009 SDCBPO00560 298 aaPredicted RBP6.43□□□□□ -1.38
SCARNA20.1-201ENST00000516009 PRB1P04280 392 aa6.43□□□□□ -1.38
SCARNA20.1-201ENST00000516009 IL5P05113 134 aa6.43□□□□□ -1.38
SCARNA20.1-201ENST00000516009 TRAPPC2P0DI81 140 aa6.43□□□□□ -1.38
SCARNA20.1-201ENST00000516009 TRAPPC2BP0DI82 140 aa6.43□□□□□ -1.38
SCARNA20.1-201ENST00000516009 EGR1P18146 543 aa6.43□□□□□ -1.38
SCARNA20.1-201ENST00000516009 ANXA7P20073 488 aaKnown RBP6.43□□□□□ -1.38
SCARNA20.1-201ENST00000516009 LMO1P25800 156 aa6.43□□□□□ -1.38
SCARNA20.1-201ENST00000516009 LOXP28300 417 aaPredicted RBP6.43□□□□□ -1.38
SCARNA20.1-201ENST00000516009 KIR2DS4P43632 304 aa6.43□□□□□ -1.38
SCARNA20.1-201ENST00000516009 KCNJ3P48549 501 aa6.43□□□□□ -1.38
SCARNA20.1-201ENST00000516009 CEBPDP49716 269 aaPredicted RBP6.43□□□□□ -1.38
SCARNA20.1-201ENST00000516009 MECP2P51608 486 aaKnown RBP6.43□□□□□ -1.38
SCARNA20.1-201ENST00000516009 SNRPD2P62316 118 aaKnown RBP6.43□□□□□ -1.38
SCARNA20.1-201ENST00000516009 CBX3Q13185 183 aa6.43□□□□□ -1.38
SCARNA20.1-201ENST00000516009 KIR2DS1Q14954 304 aa6.43□□□□□ -1.38
SCARNA20.1-201ENST00000516009 ZNF672Q499Z4 452 aaPredicted RBP6.43□□□□□ -1.38
SCARNA20.1-201ENST00000516009 METTL11BQ5VVY1 283 aa6.43□□□□□ -1.38
SCARNA20.1-201ENST00000516009 Q6ZS49 121 aa6.43□□□□□ -1.38
SCARNA20.1-201ENST00000516009 OVCH2Q7RTZ1 564 aa6.43□□□□□ -1.38
SCARNA20.1-201ENST00000516009 ZNF554Q86TJ5 538 aa6.43□□□□□ -1.38
SCARNA20.1-201ENST00000516009 AKAP14Q86UN6 197 aa6.43□□□□□ -1.38
SCARNA20.1-201ENST00000516009 ZNF843Q8N446 348 aa6.43□□□□□ -1.38
SCARNA20.1-201ENST00000516009 GCSAMQ8N6F7 178 aa6.43□□□□□ -1.38
SCARNA20.1-201ENST00000516009 ZDHHC22Q8N966 263 aa6.43□□□□□ -1.38
SCARNA20.1-201ENST00000516009 TERB2Q8NHR7 220 aa6.43□□□□□ -1.38
SCARNA20.1-201ENST00000516009 MRPL30Q8TCC3 161 aaKnown RBP6.43□□□□□ -1.38
SCARNA20.1-201ENST00000516009 Q8TCH9 128 aa6.43□□□□□ -1.38
SCARNA20.1-201ENST00000516009 FAM222BQ8WU58 562 aa6.43□□□□□ -1.38
SCARNA20.1-201ENST00000516009 CCDC107Q8WV48 283 aa6.43□□□□□ -1.38
SCARNA20.1-201ENST00000516009 HPS1Q92902 700 aa6.43□□□□□ -1.38
SCARNA20.1-201ENST00000516009 NEURL2Q9BR09 285 aa6.43□□□□□ -1.38
SCARNA20.1-201ENST00000516009 BEX2Q9BXY8 128 aa6.43□□□□□ -1.38
SCARNA20.1-201ENST00000516009 GHITMQ9H3K2 345 aa6.43□□□□□ -1.38
SCARNA20.1-201ENST00000516009 BEX1Q9HBH7 125 aa6.43□□□□□ -1.38
SCARNA20.1-201ENST00000516009 TMEM165Q9HC07 324 aa6.43□□□□□ -1.38
SCARNA20.1-201ENST00000516009 GPN1Q9HCN4 374 aaPredicted RBP6.43□□□□□ -1.38
SCARNA20.1-201ENST00000516009 Q9N2K0 584 aa6.43□□□□□ -1.38
SCARNA20.1-201ENST00000516009 GCM1Q9NP62 436 aa6.43□□□□□ -1.38
SCARNA20.1-201ENST00000516009 DECR2Q9NUI1 292 aa6.43□□□□□ -1.38
SCARNA20.1-201ENST00000516009 NECAP2Q9NVZ3 263 aa6.43□□□□□ -1.38
SCARNA20.1-201ENST00000516009 TREM2Q9NZC2 230 aa6.43□□□□□ -1.38
SCARNA20.1-201ENST00000516009 DNAJB11Q9UBS4 358 aa6.43□□□□□ -1.38
SCARNA20.1-201ENST00000516009 PPP1R3CQ9UQK1 317 aa6.43□□□□□ -1.38
SCARNA20.1-201ENST00000516009 WIPI2Q9Y4P8 454 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms