RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 IL22RA2Q969J5 263 aa11.58□□□□□ -0.55
TCOF1-213ENST00000514442 CTDSP1Q9GZU7 261 aa11.58□□□□□ -0.55
TCOF1-213ENST00000514442 Q9N2K0 584 aa11.58□□□□□ -0.55
TCOF1-213ENST00000514442 CACFD1Q9UGQ2 172 aa11.58□□□□□ -0.55
TCOF1-213ENST00000514442 KLK13Q9UKR3 277 aa11.58□□□□□ -0.55
TCOF1-213ENST00000514442 ZNF816-ZNF321PA0A0X1KG74 233 aa11.58□□□□□ -0.56
TCOF1-213ENST00000514442 C4orf51C9J302 202 aa11.58□□□□□ -0.56
TCOF1-213ENST00000514442 SH2D1BO14796 132 aa11.58□□□□□ -0.56
TCOF1-213ENST00000514442 CTSBP07858 339 aa11.58□□□□□ -0.56
TCOF1-213ENST00000514442 ZNF32P17041 273 aa11.58□□□□□ -0.56
TCOF1-213ENST00000514442 SPINK2P20155 84 aa11.58□□□□□ -0.56
TCOF1-213ENST00000514442 RPS23P62266 143 aaKnown RBP11.58□□□□□ -0.56
TCOF1-213ENST00000514442 GFRALQ6UXV0 394 aa11.58□□□□□ -0.56
TCOF1-213ENST00000514442 ZNF596Q8TC21 504 aa11.58□□□□□ -0.56
TCOF1-213ENST00000514442 LHX4Q969G2 390 aa11.58□□□□□ -0.56
TCOF1-213ENST00000514442 AQP10Q96PS8 301 aa11.58□□□□□ -0.56
TCOF1-213ENST00000514442 SERTAD4Q9NUC0 356 aa11.58□□□□□ -0.56
TCOF1-213ENST00000514442 IGKV1D-16P01601 117 aa11.58□□□□□ -0.56
TCOF1-213ENST00000514442 CCL3P10147 92 aa11.58□□□□□ -0.56
TCOF1-213ENST00000514442 MNX1P50219 401 aaPredicted RBP11.58□□□□□ -0.56
TCOF1-213ENST00000514442 EGLN1Q9GZT9 426 aa11.58□□□□□ -0.56
TCOF1-213ENST00000514442 DVL1O14640 695 aa11.58□□□□□ -0.56
TCOF1-213ENST00000514442 OR5H8P0DN80 308 aa11.58□□□□□ -0.56
TCOF1-213ENST00000514442 KITLGP21583 273 aa11.58□□□□□ -0.56
TCOF1-213ENST00000514442 OR3A1P47881 315 aa11.58□□□□□ -0.56
TCOF1-213ENST00000514442 ERVS71-1P61550 626 aa11.58□□□□□ -0.56
TCOF1-213ENST00000514442 RAC1P63000 192 aa11.58□□□□□ -0.56
TCOF1-213ENST00000514442 BAXQ07812 192 aa11.58□□□□□ -0.56
TCOF1-213ENST00000514442 GGTLC2Q14390 218 aa11.58□□□□□ -0.56
TCOF1-213ENST00000514442 TMEM241Q24JQ0 296 aa11.58□□□□□ -0.56
TCOF1-213ENST00000514442 ETV3LQ6ZN32 361 aa11.58□□□□□ -0.56
TCOF1-213ENST00000514442 SLC25A28Q96A46 364 aa11.58□□□□□ -0.56
TCOF1-213ENST00000514442 ATG101Q9BSB4 218 aa11.58□□□□□ -0.56
TCOF1-213ENST00000514442 ZMIZ1Q9ULJ6 1067 aa11.58□□□□□ -0.56
TCOF1-213ENST00000514442 FZR1Q9UM11 496 aa11.58□□□□□ -0.56
TCOF1-213ENST00000514442 KLF2Q9Y5W3 355 aaPredicted RBP11.58□□□□□ -0.56
TCOF1-213ENST00000514442 TGIF2-C20orf24A0A0A6YYL0 155 aa11.57□□□□□ -0.56
TCOF1-213ENST00000514442 RNF222A6NCQ9 220 aa11.57□□□□□ -0.56
TCOF1-213ENST00000514442 LINC01387J3KSC0 135 aa11.57□□□□□ -0.56
TCOF1-213ENST00000514442 EPPINO95925 133 aa11.57□□□□□ -0.56
TCOF1-213ENST00000514442 OR5AC1P0C628 307 aa11.57□□□□□ -0.56
TCOF1-213ENST00000514442 ACKR3P25106 362 aa11.57□□□□□ -0.56
TCOF1-213ENST00000514442 C20orf196Q8IYI0 205 aa11.57□□□□□ -0.56
TCOF1-213ENST00000514442 HIST1H1DP16402 221 aaKnown RBP11.57□□□□□ -0.56
TCOF1-213ENST00000514442 STARD6P59095 220 aa11.57□□□□□ -0.56
TCOF1-213ENST00000514442 ZXDAP98168 799 aa11.57□□□□□ -0.56
TCOF1-213ENST00000514442 BTNL8Q6UX41 500 aa11.57□□□□□ -0.56
TCOF1-213ENST00000514442 UNQ9370/PRO34162Q6UXP9 181 aa11.57□□□□□ -0.56
TCOF1-213ENST00000514442 ERGP11308 486 aa11.57□□□□□ -0.56
TCOF1-213ENST00000514442 SRD5A2P31213 254 aa11.57□□□□□ -0.56
TCOF1-213ENST00000514442 P2RY1P47900 373 aa11.57□□□□□ -0.56
TCOF1-213ENST00000514442 NANOS3P60323 173 aaKnown RBP11.57□□□□□ -0.56
TCOF1-213ENST00000514442 PPP1CBP62140 327 aa11.57□□□□□ -0.56
TCOF1-213ENST00000514442 ZNF90Q03938 601 aa11.57□□□□□ -0.56
TCOF1-213ENST00000514442 RAB35Q15286 201 aa11.57□□□□□ -0.56
TCOF1-213ENST00000514442 SPNS3Q6ZMD2 512 aa11.57□□□□□ -0.56
TCOF1-213ENST00000514442 GTF3AQ92664 365 aaKnown RBP11.57□□□□□ -0.56
TCOF1-213ENST00000514442 OPN3Q9H1Y3 402 aaPredicted RBP11.57□□□□□ -0.56
TCOF1-213ENST00000514442 MLF1P58340 268 aa11.57□□□□□ -0.56
TCOF1-213ENST00000514442 DMWDQ09019 674 aa11.57□□□□□ -0.56
TCOF1-213ENST00000514442 ZNF718Q3SXZ3 478 aa11.57□□□□□ -0.56
TCOF1-213ENST00000514442 OSR2Q8N2R0 312 aa11.57□□□□□ -0.56
TCOF1-213ENST00000514442 ARV1Q9H2C2 271 aa11.57□□□□□ -0.56
TCOF1-213ENST00000514442 OR4C45A6NMZ5 311 aa11.56□□□□□ -0.56
TCOF1-213ENST00000514442 F6UZH7 168 aa11.56□□□□□ -0.56
TCOF1-213ENST00000514442 ZNF92Q03936 586 aa11.56□□□□□ -0.56
TCOF1-213ENST00000514442 PHYHD1Q5SRE7 291 aa11.56□□□□□ -0.56
TCOF1-213ENST00000514442 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.56□□□□□ -0.56
TCOF1-213ENST00000514442 OR8G2PQ6IF36 304 aa11.56□□□□□ -0.56
TCOF1-213ENST00000514442 LSRQ86X29 649 aaPredicted RBP11.56□□□□□ -0.56
TCOF1-213ENST00000514442 OR1P1Q8NH06 330 aa11.56□□□□□ -0.56
TCOF1-213ENST00000514442 UBALD1Q8TB05 177 aa11.56□□□□□ -0.56
TCOF1-213ENST00000514442 MSI2Q96DH6 328 aaKnown RBP11.56□□□□□ -0.56
TCOF1-213ENST00000514442 PSME4Q14997 1843 aa11.56□□□□□ -0.56
TCOF1-213ENST00000514442 MEX3AA1L020 520 aaKnown RBP11.56□□□□□ -0.56
TCOF1-213ENST00000514442 FGF16O43320 207 aa11.56□□□□□ -0.56
TCOF1-213ENST00000514442 THBS4P35443 961 aa11.56□□□□□ -0.56
TCOF1-213ENST00000514442 KHDC3LQ587J8 217 aa11.56□□□□□ -0.56
TCOF1-213ENST00000514442 SLC25A45Q8N413 288 aa11.56□□□□□ -0.56
TCOF1-213ENST00000514442 ZNF721Q8TF20 911 aa11.56□□□□□ -0.56
TCOF1-213ENST00000514442 APOBEC3DQ96AK3 386 aaPredicted RBP11.56□□□□□ -0.56
TCOF1-213ENST00000514442 ZNF501Q96CX3 271 aaPredicted RBP11.56□□□□□ -0.56
TCOF1-213ENST00000514442 BOD1Q96IK1 185 aa11.56□□□□□ -0.56
TCOF1-213ENST00000514442 ZNF71Q9NQZ8 489 aaPredicted RBP11.56□□□□□ -0.56
TCOF1-213ENST00000514442 PILRAQ9UKJ1 303 aa11.56□□□□□ -0.56
TCOF1-213ENST00000514442 PIN1P1O15428 100 aa11.56□□□□□ -0.56
TCOF1-213ENST00000514442 TRGC1P0CF51 173 aa11.56□□□□□ -0.56
TCOF1-213ENST00000514442 NPEPL1Q8NDH3 523 aa11.56□□□□□ -0.56
TCOF1-213ENST00000514442 CMTM2Q8TAZ6 248 aa11.56□□□□□ -0.56
TCOF1-213ENST00000514442 MAGT1Q9H0U3 335 aa11.56□□□□□ -0.56
TCOF1-213ENST00000514442 HEYLQ9NQ87 328 aaPredicted RBP11.56□□□□□ -0.56
TCOF1-213ENST00000514442 CBLN4Q9NTU7 201 aa11.56□□□□□ -0.56
TCOF1-213ENST00000514442 LYZL6O75951 148 aa11.56□□□□□ -0.56
TCOF1-213ENST00000514442 ID4P47928 161 aa11.56□□□□□ -0.56
TCOF1-213ENST00000514442 LIMK1P53667 647 aa11.56□□□□□ -0.56
TCOF1-213ENST00000514442 CDC20BQ86Y33 519 aa11.56□□□□□ -0.56
TCOF1-213ENST00000514442 FBXL14Q8N1E6 418 aa11.56□□□□□ -0.56
TCOF1-213ENST00000514442 ASB10Q8WXI3 467 aa11.56□□□□□ -0.56
TCOF1-213ENST00000514442 UHRF2Q96PU4 802 aa11.56□□□□□ -0.56
TCOF1-213ENST00000514442 BET1LQ9NYM9 111 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms