RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 UQCC2Q9BRT2 126 aa6.75□□□□□ -1.33
NEDD4-210ENST00000513957 MS4A7Q9GZW8 240 aaPredicted RBP6.75□□□□□ -1.33
NEDD4-210ENST00000513957 SIRPDQ9H106 197 aa6.75□□□□□ -1.33
NEDD4-210ENST00000513957 EXOSC4Q9NPD3 245 aaKnown RBP6.75□□□□□ -1.33
NEDD4-210ENST00000513957 RBFOX1Q9NWB1 397 aaKnown RBP6.75□□□□□ -1.33
NEDD4-210ENST00000513957 GHRLQ9UBU3 117 aa6.75□□□□□ -1.33
NEDD4-210ENST00000513957 OR14J1Q9UGF5 321 aa6.75□□□□□ -1.33
NEDD4-210ENST00000513957 MXRA5Q9NR99 2828 aa6.75□□□□□ -1.33
NEDD4-210ENST00000513957 A0A1B0GW55 424 aa6.74□□□□□ -1.33
NEDD4-210ENST00000513957 CLDN34H7C241 214 aa6.74□□□□□ -1.33
NEDD4-210ENST00000513957 GABRPO00591 440 aa6.74□□□□□ -1.33
NEDD4-210ENST00000513957 MGST3O14880 152 aa6.74□□□□□ -1.33
NEDD4-210ENST00000513957 SPRY1O43609 319 aaPredicted RBP6.74□□□□□ -1.33
NEDD4-210ENST00000513957 ARL6IP5O75915 188 aa6.74□□□□□ -1.33
NEDD4-210ENST00000513957 LPLP06858 475 aa6.74□□□□□ -1.33
NEDD4-210ENST00000513957 DUX4L2P0CJ85 424 aa6.74□□□□□ -1.33
NEDD4-210ENST00000513957 DUX4L3P0CJ86 424 aa6.74□□□□□ -1.33
NEDD4-210ENST00000513957 DUX4L4P0CJ87 422 aa6.74□□□□□ -1.33
NEDD4-210ENST00000513957 DUX4L5P0CJ88 424 aa6.74□□□□□ -1.33
NEDD4-210ENST00000513957 DUX4L6P0CJ89 424 aa6.74□□□□□ -1.33
NEDD4-210ENST00000513957 DUX4L7P0CJ90 424 aa6.74□□□□□ -1.33
NEDD4-210ENST00000513957 SELLP14151 372 aa6.74□□□□□ -1.33
NEDD4-210ENST00000513957 GALP22466 123 aa6.74□□□□□ -1.33
NEDD4-210ENST00000513957 GABRA5P31644 462 aa6.74□□□□□ -1.33
NEDD4-210ENST00000513957 TGFBR2P37173 567 aa6.74□□□□□ -1.33
NEDD4-210ENST00000513957 PTGFRP43088 359 aa6.74□□□□□ -1.33
NEDD4-210ENST00000513957 NPBWR2P48146 333 aa6.74□□□□□ -1.33
NEDD4-210ENST00000513957 RPL31P62899 125 aaKnown RBP6.74□□□□□ -1.33
NEDD4-210ENST00000513957 COL10A1Q03692 680 aa6.74□□□□□ -1.33
NEDD4-210ENST00000513957 RSU1Q15404 277 aa6.74□□□□□ -1.33
NEDD4-210ENST00000513957 KLF17Q5JT82 389 aaPredicted RBP6.74□□□□□ -1.33
NEDD4-210ENST00000513957 DUX4L9Q6RFH8 374 aaPredicted RBP6.74□□□□□ -1.33
NEDD4-210ENST00000513957 UNQ9370/PRO34162Q6UXP9 181 aa6.74□□□□□ -1.33
NEDD4-210ENST00000513957 ZFP41Q8N8Y5 198 aa6.74□□□□□ -1.33
NEDD4-210ENST00000513957 ASCC1Q8N9N2 400 aaKnown RBP6.74□□□□□ -1.33
NEDD4-210ENST00000513957 OR52N4Q8NGI2 321 aa6.74□□□□□ -1.33
NEDD4-210ENST00000513957 OR5D18Q8NGL1 313 aa6.74□□□□□ -1.33
NEDD4-210ENST00000513957 OR13C5Q8NGS8 318 aa6.74□□□□□ -1.33
NEDD4-210ENST00000513957 TNFAIP8L1Q8WVP5 186 aa6.74□□□□□ -1.33
NEDD4-210ENST00000513957 OR5M11Q96RB7 305 aa6.74□□□□□ -1.33
NEDD4-210ENST00000513957 TBX15Q96SF7 602 aa6.74□□□□□ -1.33
NEDD4-210ENST00000513957 MGLLQ99685 303 aa6.74□□□□□ -1.33
NEDD4-210ENST00000513957 PCGF1Q9BSM1 259 aa6.74□□□□□ -1.33
NEDD4-210ENST00000513957 CCDC90BQ9GZT6 254 aa6.74□□□□□ -1.33
NEDD4-210ENST00000513957 SLITRK2Q9H156 845 aa6.74□□□□□ -1.33
NEDD4-210ENST00000513957 METTL9Q9H1A3 318 aa6.74□□□□□ -1.33
NEDD4-210ENST00000513957 PRDM13Q9H4Q3 707 aa6.74□□□□□ -1.33
NEDD4-210ENST00000513957 NCOR1P1Q9H4R4 102 aa6.74□□□□□ -1.33
NEDD4-210ENST00000513957 NOX4Q9NPH5 578 aa6.74□□□□□ -1.33
NEDD4-210ENST00000513957 ONECUT1Q9UBC0 465 aa6.74□□□□□ -1.33
NEDD4-210ENST00000513957 DUX4Q9UBX2 424 aa6.74□□□□□ -1.33
NEDD4-210ENST00000513957 LINC00312Q9Y6C7 94 aa6.74□□□□□ -1.33
NEDD4-210ENST00000513957 IGKV1-12A0A0C4DH73 117 aa6.73□□□□□ -1.33
NEDD4-210ENST00000513957 PNMA8CA0A1B0GUJ8 204 aa6.73□□□□□ -1.33
NEDD4-210ENST00000513957 hADV38S2A0JD32 116 aa6.73□□□□□ -1.33
NEDD4-210ENST00000513957 F8VVB4 439 aa6.73□□□□□ -1.33
NEDD4-210ENST00000513957 F8VWA3 439 aa6.73□□□□□ -1.33
NEDD4-210ENST00000513957 TRIM77I1YAP6 450 aa6.73□□□□□ -1.33
NEDD4-210ENST00000513957 ANGPTL7O43827 346 aa6.73□□□□□ -1.33
NEDD4-210ENST00000513957 OR2H2O95918 312 aa6.73□□□□□ -1.33
NEDD4-210ENST00000513957 IGKV1D-12P01611 117 aa6.73□□□□□ -1.33
NEDD4-210ENST00000513957 SFTPBP07988 381 aa6.73□□□□□ -1.33
NEDD4-210ENST00000513957 UBBP0CG47 229 aa6.73□□□□□ -1.33
NEDD4-210ENST00000513957 GTF2F2P13984 249 aa6.73□□□□□ -1.33
NEDD4-210ENST00000513957 PRTN3P24158 256 aa6.73□□□□□ -1.33
NEDD4-210ENST00000513957 LGALS4P56470 323 aa6.73□□□□□ -1.33
NEDD4-210ENST00000513957 ERVFRD-1P60508 538 aa6.73□□□□□ -1.33
NEDD4-210ENST00000513957 ARF6P62330 175 aa6.73□□□□□ -1.33
NEDD4-210ENST00000513957 MPV17LQ2QL34 196 aa6.73□□□□□ -1.33
NEDD4-210ENST00000513957 KCTD21Q4G0X4 260 aa6.73□□□□□ -1.33
NEDD4-210ENST00000513957 ACSM3Q53FZ2 586 aa6.73□□□□□ -1.33
NEDD4-210ENST00000513957 HSD17B12Q53GQ0 312 aa6.73□□□□□ -1.33
NEDD4-210ENST00000513957 GLT8D1Q68CQ7 371 aa6.73□□□□□ -1.33
NEDD4-210ENST00000513957 C17orf107Q6ZR85 190 aa6.73□□□□□ -1.33
NEDD4-210ENST00000513957 VMO1Q7Z5L0 202 aa6.73□□□□□ -1.33
NEDD4-210ENST00000513957 PHC2Q8IXK0 858 aa6.73□□□□□ -1.33
NEDD4-210ENST00000513957 RFT1Q96AA3 541 aa6.73□□□□□ -1.33
NEDD4-210ENST00000513957 SPACA5Q96QH8 159 aa6.73□□□□□ -1.33
NEDD4-210ENST00000513957 CENPOQ9BU64 300 aa6.73□□□□□ -1.33
NEDD4-210ENST00000513957 FAM192AQ9GZU8 254 aa6.73□□□□□ -1.33
NEDD4-210ENST00000513957 SPACA1Q9HBV2 294 aa6.73□□□□□ -1.33
NEDD4-210ENST00000513957 ACOT13Q9NPJ3 140 aa6.73□□□□□ -1.33
NEDD4-210ENST00000513957 FBXL7Q9UJT9 491 aa6.73□□□□□ -1.33
NEDD4-210ENST00000513957 GSTK1Q9Y2Q3 226 aa6.73□□□□□ -1.33
NEDD4-210ENST00000513957 LRRC42Q9Y546 428 aa6.73□□□□□ -1.33
NEDD4-210ENST00000513957 TRAV8-7A0A075B6U6 113 aa6.72□□□□□ -1.33
NEDD4-210ENST00000513957 IGHV1-69DA0A0B4J2H0 117 aa6.72□□□□□ -1.33
NEDD4-210ENST00000513957 CENPVL3A0A0U1RRI6 287 aa6.72□□□□□ -1.33
NEDD4-210ENST00000513957 FAM90A10PA6NDY2 464 aa6.72□□□□□ -1.33
NEDD4-210ENST00000513957 FAM90A18PA6NE21 464 aa6.72□□□□□ -1.33
NEDD4-210ENST00000513957 FAM90A16PA6NEW6 464 aa6.72□□□□□ -1.33
NEDD4-210ENST00000513957 FAM90A20PA6NIJ5 464 aa6.72□□□□□ -1.33
NEDD4-210ENST00000513957 FAM90A8PA6NJQ4 464 aa6.72□□□□□ -1.33
NEDD4-210ENST00000513957 FAM90A7PA6NKC0 464 aa6.72□□□□□ -1.33
NEDD4-210ENST00000513957 FAM90A22PA8MWA6 464 aa6.72□□□□□ -1.33
NEDD4-210ENST00000513957 FAM90A12PA8MX19 464 aa6.72□□□□□ -1.33
NEDD4-210ENST00000513957 FAM90A5PA8MXJ8 464 aa6.72□□□□□ -1.33
NEDD4-210ENST00000513957 FAM90A23PA8MXZ1 464 aa6.72□□□□□ -1.33
NEDD4-210ENST00000513957 PSPNO60542 156 aa6.72□□□□□ -1.33
NEDD4-210ENST00000513957 IGHV1-69P01742 117 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms