RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 Q9N2K0 584 aa7.11□□□□□ -1.27
RNF4-220ENST00000513578 ZNF701Q9NV72 531 aaPredicted RBP7.11□□□□□ -1.27
RNF4-220ENST00000513578 ZNF581Q9P0T4 197 aa7.11□□□□□ -1.27
RNF4-220ENST00000513578 ITPR1Q14643 2758 aa7.11□□□□□ -1.27
RNF4-220ENST00000513578 SHANK1Q9Y566 2161 aa7.1□□□□□ -1.27
RNF4-220ENST00000513578 LOC400499M0QZD8 3231 aa7.1□□□□□ -1.27
RNF4-220ENST00000513578 KIR2DS1A0A191URI9 304 aa7.1□□□□□ -1.27
RNF4-220ENST00000513578 OR5H14A6NHG9 310 aa7.1□□□□□ -1.27
RNF4-220ENST00000513578 HMSDA8MTL9 139 aa7.1□□□□□ -1.27
RNF4-220ENST00000513578 M0R1B8 84 aa7.1□□□□□ -1.27
RNF4-220ENST00000513578 TIMM8AO60220 97 aaPredicted RBP7.1□□□□□ -1.27
RNF4-220ENST00000513578 RHBDL1O75783 438 aa7.1□□□□□ -1.27
RNF4-220ENST00000513578 SFT2D2O95562 160 aa7.1□□□□□ -1.27
RNF4-220ENST00000513578 DIRAS3O95661 229 aa7.1□□□□□ -1.27
RNF4-220ENST00000513578 CD8AP01732 235 aa7.1□□□□□ -1.27
RNF4-220ENST00000513578 OR5H8P0DN80 308 aa7.1□□□□□ -1.27
RNF4-220ENST00000513578 DNASE1P24855 282 aa7.1□□□□□ -1.27
RNF4-220ENST00000513578 PTAFRP25105 342 aa7.1□□□□□ -1.27
RNF4-220ENST00000513578 CD34P28906 385 aa7.1□□□□□ -1.27
RNF4-220ENST00000513578 KIR2DS4P43632 304 aa7.1□□□□□ -1.27
RNF4-220ENST00000513578 ZNF83P51522 516 aa7.1□□□□□ -1.27
RNF4-220ENST00000513578 IL13RA1P78552 427 aa7.1□□□□□ -1.27
RNF4-220ENST00000513578 IFITM2Q01629 132 aa7.1□□□□□ -1.27
RNF4-220ENST00000513578 FAM27E3Q08E93 113 aa7.1□□□□□ -1.27
RNF4-220ENST00000513578 IKZF1Q13422 519 aa7.1□□□□□ -1.27
RNF4-220ENST00000513578 PPP1R1AQ13522 171 aa7.1□□□□□ -1.27
RNF4-220ENST00000513578 KIR2DS1Q14954 304 aa7.1□□□□□ -1.27
RNF4-220ENST00000513578 FIP1L1Q6UN15 594 aaKnown RBP7.1□□□□□ -1.27
RNF4-220ENST00000513578 Q6ZR03 302 aa7.1□□□□□ -1.27
RNF4-220ENST00000513578 TMED4Q7Z7H5 227 aa7.1□□□□□ -1.27
RNF4-220ENST00000513578 FAM90A1Q86YD7 464 aa7.1□□□□□ -1.27
RNF4-220ENST00000513578 C9orf62Q8N4C0 152 aa7.1□□□□□ -1.27
RNF4-220ENST00000513578 SUMF2Q8NBJ7 301 aa7.1□□□□□ -1.27
RNF4-220ENST00000513578 OR5M8Q8NGP6 311 aa7.1□□□□□ -1.27
RNF4-220ENST00000513578 PRR7Q8TB68 274 aa7.1□□□□□ -1.27
RNF4-220ENST00000513578 RND1Q92730 232 aa7.1□□□□□ -1.27
RNF4-220ENST00000513578 TMEM230Q96A57 120 aa7.1□□□□□ -1.27
RNF4-220ENST00000513578 PIK3IP1Q96FE7 263 aa7.1□□□□□ -1.27
RNF4-220ENST00000513578 PHB2Q99623 299 aa7.1□□□□□ -1.27
RNF4-220ENST00000513578 PRORYQ9H606 182 aa7.1□□□□□ -1.27
RNF4-220ENST00000513578 CA10Q9NS85 328 aa7.1□□□□□ -1.27
RNF4-220ENST00000513578 RASL12Q9NYN1 266 aa7.1□□□□□ -1.27
RNF4-220ENST00000513578 OPN4Q9UHM6 478 aa7.1□□□□□ -1.27
RNF4-220ENST00000513578 TINAGQ9UJW2 476 aa7.1□□□□□ -1.27
RNF4-220ENST00000513578 PAIP2BQ9ULR5 123 aaKnown RBP7.1□□□□□ -1.27
RNF4-220ENST00000513578 MGAT4AQ9UM21 535 aa7.1□□□□□ -1.27
RNF4-220ENST00000513578 ATP23Q9Y6H3 246 aa7.1□□□□□ -1.27
RNF4-220ENST00000513578 HECTD1Q9ULT8 2610 aa7.09□□□□□ -1.27
RNF4-220ENST00000513578 TRAV24A0A0B4J272 114 aa7.09□□□□□ -1.27
RNF4-220ENST00000513578 TMEM8BA6NDV4 472 aa7.09□□□□□ -1.27
RNF4-220ENST00000513578 TRDCB7Z8K6 153 aa7.09□□□□□ -1.27
RNF4-220ENST00000513578 F5H5P2 479 aa7.09□□□□□ -1.27
RNF4-220ENST00000513578 H0YL77 283 aa7.09□□□□□ -1.27
RNF4-220ENST00000513578 IFNL4K9M1U5 179 aa7.09□□□□□ -1.27
RNF4-220ENST00000513578 SDCBPO00560 298 aaPredicted RBP7.09□□□□□ -1.27
RNF4-220ENST00000513578 CDIPTO14735 213 aa7.09□□□□□ -1.27
RNF4-220ENST00000513578 SH2D1BO14796 132 aa7.09□□□□□ -1.27
RNF4-220ENST00000513578 DEGS1O15121 323 aa7.09□□□□□ -1.27
RNF4-220ENST00000513578 SLC22A5O76082 557 aa7.09□□□□□ -1.27
RNF4-220ENST00000513578 HLA-AP01891 365 aaKnown RBP7.09□□□□□ -1.27
RNF4-220ENST00000513578 C1QTNF9P0C862 333 aa7.09□□□□□ -1.27
RNF4-220ENST00000513578 RPS2P15880 293 aaKnown RBP7.09□□□□□ -1.27
RNF4-220ENST00000513578 BMP5P22003 454 aa7.09□□□□□ -1.27
RNF4-220ENST00000513578 CD40P25942 277 aa7.09□□□□□ -1.27
RNF4-220ENST00000513578 CCKARP32238 428 aa7.09□□□□□ -1.27
RNF4-220ENST00000513578 CA7P43166 264 aa7.09□□□□□ -1.27
RNF4-220ENST00000513578 GLP1RP43220 463 aa7.09□□□□□ -1.27
RNF4-220ENST00000513578 KCNJ3P48549 501 aa7.09□□□□□ -1.27
RNF4-220ENST00000513578 FABP6P51161 128 aa7.09□□□□□ -1.27
RNF4-220ENST00000513578 CASP6P55212 293 aa7.09□□□□□ -1.27
RNF4-220ENST00000513578 PAX5Q02548 391 aa7.09□□□□□ -1.27
RNF4-220ENST00000513578 C2orf68Q2NKX9 166 aa7.09□□□□□ -1.27
RNF4-220ENST00000513578 FBXL19-AS1Q494R0 122 aa7.09□□□□□ -1.27
RNF4-220ENST00000513578 PRR30Q53SZ7 412 aaPredicted RBP7.09□□□□□ -1.27
RNF4-220ENST00000513578 LY6G6FQ5SQ64 297 aa7.09□□□□□ -1.27
RNF4-220ENST00000513578 C11orf88Q6PI97 169 aa7.09□□□□□ -1.27
RNF4-220ENST00000513578 SLC22A25Q6T423 547 aa7.09□□□□□ -1.27
RNF4-220ENST00000513578 TMEM108Q6UXF1 575 aa7.09□□□□□ -1.27
RNF4-220ENST00000513578 Q6ZPA2 131 aa7.09□□□□□ -1.27
RNF4-220ENST00000513578 MOB1BQ7L9L4 216 aa7.09□□□□□ -1.27
RNF4-220ENST00000513578 UXS1Q8NBZ7 420 aa7.09□□□□□ -1.27
RNF4-220ENST00000513578 ADAD2Q8NCV1 583 aaKnown RBP7.09□□□□□ -1.27
RNF4-220ENST00000513578 OR11H4Q8NGC9 324 aa7.09□□□□□ -1.27
RNF4-220ENST00000513578 OR2T35Q8NGX2 323 aa7.09□□□□□ -1.27
RNF4-220ENST00000513578 MRPL30Q8TCC3 161 aaKnown RBP7.09□□□□□ -1.27
RNF4-220ENST00000513578 TMEM171Q8WVE6 324 aa7.09□□□□□ -1.27
RNF4-220ENST00000513578 MAFIPQ8WZ33 124 aa7.09□□□□□ -1.27
RNF4-220ENST00000513578 MOB3AQ96BX8 217 aa7.09□□□□□ -1.27
RNF4-220ENST00000513578 ZNF2Q9BSG1 426 aaPredicted RBP7.09□□□□□ -1.27
RNF4-220ENST00000513578 DPCDQ9BVM2 203 aaPredicted RBP7.09□□□□□ -1.27
RNF4-220ENST00000513578 ITGB1BP2Q9UKP3 347 aa7.09□□□□□ -1.27
RNF4-220ENST00000513578 C14orf166Q9Y224 244 aaKnown RBP7.09□□□□□ -1.27
RNF4-220ENST00000513578 MEMO1Q9Y316 297 aa7.09□□□□□ -1.27
RNF4-220ENST00000513578 PLSCR5A0PG75 271 aa7.08□□□□□ -1.28
RNF4-220ENST00000513578 EEF1E1-BLOC1S5C9J1V9 151 aa7.08□□□□□ -1.28
RNF4-220ENST00000513578 NPIPB11E5RHQ5 1161 aa7.08□□□□□ -1.28
RNF4-220ENST00000513578 SMLR1H3BR10 107 aa7.08□□□□□ -1.28
RNF4-220ENST00000513578 SLC33A1O00400 549 aaPredicted RBP7.08□□□□□ -1.28
RNF4-220ENST00000513578 GOSR2O14653 212 aa7.08□□□□□ -1.28
RNF4-220ENST00000513578 TUSC2O75896 110 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms