RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 EMG1Q92979 244 aaKnown RBP10.05□□□□□ -0.8
VEGFA-216ENST00000512683 SPSB1Q96BD6 273 aa10.05□□□□□ -0.8
VEGFA-216ENST00000512683 C4orf36Q96KX1 117 aa10.05□□□□□ -0.8
VEGFA-216ENST00000512683 RBM14Q96PK6 669 aaKnown RBP10.05□□□□□ -0.8
VEGFA-216ENST00000512683 ISG20L2Q9H9L3 353 aaKnown RBP10.05□□□□□ -0.8
VEGFA-216ENST00000512683 S100A14Q9HCY8 104 aa10.05□□□□□ -0.8
VEGFA-216ENST00000512683 PCDHB16Q9NRJ7 776 aa10.05□□□□□ -0.8
VEGFA-216ENST00000512683 RBFOX1Q9NWB1 397 aaKnown RBP10.05□□□□□ -0.8
VEGFA-216ENST00000512683 HHLA2Q9UM44 414 aa10.05□□□□□ -0.8
VEGFA-216ENST00000512683 MYRFQ9Y2G1 1151 aa10.05□□□□□ -0.8
VEGFA-216ENST00000512683 GMPPBQ9Y5P6 360 aa10.05□□□□□ -0.8
VEGFA-216ENST00000512683 PSPNO60542 156 aa10.04□□□□□ -0.8
VEGFA-216ENST00000512683 IGLV1-47P01700 117 aa10.04□□□□□ -0.8
VEGFA-216ENST00000512683 IGHA1P01876 353 aa10.04□□□□□ -0.8
VEGFA-216ENST00000512683 MT-ND2P03891 347 aa10.04□□□□□ -0.8
VEGFA-216ENST00000512683 CSN2P05814 226 aa10.04□□□□□ -0.8
VEGFA-216ENST00000512683 HTR1AP08908 422 aa10.04□□□□□ -0.8
VEGFA-216ENST00000512683 FAM106CPP0CH98 169 aa10.04□□□□□ -0.8
VEGFA-216ENST00000512683 BCL3P20749 454 aa10.04□□□□□ -0.8
VEGFA-216ENST00000512683 DUSP1P28562 367 aa10.04□□□□□ -0.8
VEGFA-216ENST00000512683 MNDAP41218 407 aa10.04□□□□□ -0.8
VEGFA-216ENST00000512683 MTCP1P56278 107 aa10.04□□□□□ -0.8
VEGFA-216ENST00000512683 EGFEM1PQ0D2K5 195 aa10.04□□□□□ -0.8
VEGFA-216ENST00000512683 PDZK1IP1Q13113 114 aa10.04□□□□□ -0.8
VEGFA-216ENST00000512683 ALKBH1Q13686 389 aaKnown RBP10.04□□□□□ -0.8
VEGFA-216ENST00000512683 EDDM3AQ14507 147 aa10.04□□□□□ -0.8
VEGFA-216ENST00000512683 LHFPL2Q6ZUX7 228 aa10.04□□□□□ -0.8
VEGFA-216ENST00000512683 CHST4Q8NCG5 386 aa10.04□□□□□ -0.8
VEGFA-216ENST00000512683 MYCBPQ99417 103 aaPredicted RBP10.04□□□□□ -0.8
VEGFA-216ENST00000512683 MCRIP2Q9BUT9 160 aaKnown RBP10.04□□□□□ -0.8
VEGFA-216ENST00000512683 C9orf16Q9BUW7 83 aa10.04□□□□□ -0.8
VEGFA-216ENST00000512683 NCOR1P1Q9H4R4 102 aa10.04□□□□□ -0.8
VEGFA-216ENST00000512683 HMG20AQ9NP66 347 aa10.04□□□□□ -0.8
VEGFA-216ENST00000512683 AMBNQ9NP70 447 aa10.04□□□□□ -0.8
VEGFA-216ENST00000512683 FAM118AQ9NWS6 357 aa10.04□□□□□ -0.8
VEGFA-216ENST00000512683 A0A087X0M5 115 aa10.03□□□□□ -0.8
VEGFA-216ENST00000512683 IGKV1-12A0A0C4DH73 117 aa10.03□□□□□ -0.8
VEGFA-216ENST00000512683 LOC100130705A0A1B0GUX0 176 aa10.03□□□□□ -0.8
VEGFA-216ENST00000512683 A0A1B0GX30 115 aa10.03□□□□□ -0.8
VEGFA-216ENST00000512683 E9PI62 339 aa10.03□□□□□ -0.8
VEGFA-216ENST00000512683 MPIG6BO95866 241 aa10.03□□□□□ -0.8
VEGFA-216ENST00000512683 IGKV1D-12P01611 117 aa10.03□□□□□ -0.8
VEGFA-216ENST00000512683 CALCBP10092 127 aa10.03□□□□□ -0.8
VEGFA-216ENST00000512683 ZNF20P17024 532 aa10.03□□□□□ -0.8
VEGFA-216ENST00000512683 TCTEX1D4Q5JR98 221 aa10.03□□□□□ -0.8
VEGFA-216ENST00000512683 TRAPPC6BQ86SZ2 158 aa10.03□□□□□ -0.8
VEGFA-216ENST00000512683 C10orf67Q8IYJ2 551 aa10.03□□□□□ -0.8
VEGFA-216ENST00000512683 SAXO1Q8IYX7 474 aa10.03□□□□□ -0.8
VEGFA-216ENST00000512683 SYS1Q8N2H4 156 aa10.03□□□□□ -0.8
VEGFA-216ENST00000512683 PQLC1Q8N2U9 271 aa10.03□□□□□ -0.8
VEGFA-216ENST00000512683 OR13C3Q8NGS6 347 aa10.03□□□□□ -0.8
VEGFA-216ENST00000512683 DPF1Q92782 380 aa10.03□□□□□ -0.8
VEGFA-216ENST00000512683 MYDGFQ969H8 173 aa10.03□□□□□ -0.8
VEGFA-216ENST00000512683 RFT1Q96AA3 541 aa10.03□□□□□ -0.8
VEGFA-216ENST00000512683 OPALINQ96PE5 141 aa10.03□□□□□ -0.8
VEGFA-216ENST00000512683 SPACA5Q96QH8 159 aa10.03□□□□□ -0.8
VEGFA-216ENST00000512683 SLC25A33Q9BSK2 321 aa10.03□□□□□ -0.8
VEGFA-216ENST00000512683 ALG8Q9BVK2 526 aa10.03□□□□□ -0.8
VEGFA-216ENST00000512683 COMMD4Q9H0A8 199 aa10.03□□□□□ -0.8
VEGFA-216ENST00000512683 ZFP57Q9NU63 452 aa10.03□□□□□ -0.8
VEGFA-216ENST00000512683 MRPS18AQ9NVS2 196 aaKnown RBP10.03□□□□□ -0.8
VEGFA-216ENST00000512683 ERVK13-1Q9NX77 482 aa10.03□□□□□ -0.8
VEGFA-216ENST00000512683 SNTNA6NMZ2 147 aa10.02□□□□□ -0.81
VEGFA-216ENST00000512683 LY6LH3BQJ8 138 aa10.02□□□□□ -0.81
VEGFA-216ENST00000512683 BUB1B-PAK6H3BSN5 160 aa10.02□□□□□ -0.81
VEGFA-216ENST00000512683 K7EIL1 84 aa10.02□□□□□ -0.81
VEGFA-216ENST00000512683 TOR1AO14656 332 aa10.02□□□□□ -0.81
VEGFA-216ENST00000512683 MPZL2O60487 215 aa10.02□□□□□ -0.81
VEGFA-216ENST00000512683 ZFPL1O95159 310 aa10.02□□□□□ -0.81
VEGFA-216ENST00000512683 PRKACAP17612 351 aa10.02□□□□□ -0.81
VEGFA-216ENST00000512683 CDK2P24941 298 aa10.02□□□□□ -0.81
VEGFA-216ENST00000512683 OR3A1P47881 315 aa10.02□□□□□ -0.81
VEGFA-216ENST00000512683 POU3F4P49335 361 aa10.02□□□□□ -0.81
VEGFA-216ENST00000512683 OSR2Q8N2R0 312 aa10.02□□□□□ -0.81
VEGFA-216ENST00000512683 TPRX1Q8N7U7 411 aa10.02□□□□□ -0.81
VEGFA-216ENST00000512683 ZNF565Q8N9K5 539 aa10.02□□□□□ -0.81
VEGFA-216ENST00000512683 OR51D1Q8NGF3 324 aa10.02□□□□□ -0.81
VEGFA-216ENST00000512683 OR4D6Q8NGJ1 314 aa10.02□□□□□ -0.81
VEGFA-216ENST00000512683 OR52I1Q8NGK6 324 aa10.02□□□□□ -0.81
VEGFA-216ENST00000512683 APH1BQ8WW43 257 aa10.02□□□□□ -0.81
VEGFA-216ENST00000512683 Q96MT0 163 aa10.02□□□□□ -0.81
VEGFA-216ENST00000512683 CHST6Q9GZX3 395 aa10.02□□□□□ -0.81
VEGFA-216ENST00000512683 EXOSC4Q9NPD3 245 aaKnown RBP10.02□□□□□ -0.81
VEGFA-216ENST00000512683 INPP5EQ9NRR6 644 aa10.02□□□□□ -0.81
VEGFA-216ENST00000512683 OR6C3Q9NZP0 311 aa10.02□□□□□ -0.81
VEGFA-216ENST00000512683 NBEAL2Q6ZNJ1 2754 aa10.01□□□□□ -0.81
VEGFA-216ENST00000512683 A0A1W2PRX2 142 aa10.01□□□□□ -0.81
VEGFA-216ENST00000512683 FAM90A18PA6NE21 464 aa10.01□□□□□ -0.81
VEGFA-216ENST00000512683 FAM90A16PA6NEW6 464 aa10.01□□□□□ -0.81
VEGFA-216ENST00000512683 FAM90A20PA6NIJ5 464 aa10.01□□□□□ -0.81
VEGFA-216ENST00000512683 ZNF729A6NN14 1252 aaPredicted RBP10.01□□□□□ -0.81
VEGFA-216ENST00000512683 FAM90A9PA6NNJ1 464 aa10.01□□□□□ -0.81
VEGFA-216ENST00000512683 FAM90A12PA8MX19 464 aa10.01□□□□□ -0.81
VEGFA-216ENST00000512683 FAM90A5PA8MXJ8 464 aa10.01□□□□□ -0.81
VEGFA-216ENST00000512683 EBAG9O00559 213 aa10.01□□□□□ -0.81
VEGFA-216ENST00000512683 WBP4O75554 376 aaKnown RBP10.01□□□□□ -0.81
VEGFA-216ENST00000512683 KDM4BO94953 1096 aa10.01□□□□□ -0.81
VEGFA-216ENST00000512683 FADS2O95864 444 aaKnown RBP10.01□□□□□ -0.81
VEGFA-216ENST00000512683 LPLP06858 475 aa10.01□□□□□ -0.81
VEGFA-216ENST00000512683 FAM90A15PP0C7V4 464 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms