RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 IGHA1P01876 353 aa5.12□□□□□ -1.59
USP38-203ENST00000511739 IGHA2P01877 340 aa5.12□□□□□ -1.59
USP38-203ENST00000511739 OR4E1P0C645 316 aa5.12□□□□□ -1.59
USP38-203ENST00000511739 PRR35P0CG20 571 aa5.12□□□□□ -1.59
USP38-203ENST00000511739 PGA3P0DJD8 388 aa5.12□□□□□ -1.59
USP38-203ENST00000511739 PTBP1P26599 531 aaKnown RBP eCLIP5.12□□□□□ -1.592e-6■■■■□ 26
USP38-203ENST00000511739 CALCRP30988 508 aa5.12□□□□□ -1.59
USP38-203ENST00000511739 TGFBR1P36897 503 aa5.12□□□□□ -1.59
USP38-203ENST00000511739 WNT5AP41221 380 aa5.12□□□□□ -1.59
USP38-203ENST00000511739 KISS1Q15726 138 aa5.12□□□□□ -1.59
USP38-203ENST00000511739 CD226Q15762 336 aa5.12□□□□□ -1.59
USP38-203ENST00000511739 LYG2Q86SG7 212 aa5.12□□□□□ -1.59
USP38-203ENST00000511739 SLC26A10Q8NG04 563 aa5.12□□□□□ -1.59
USP38-203ENST00000511739 OR1N2Q8NGR9 330 aa5.12□□□□□ -1.59
USP38-203ENST00000511739 OR10J6PQ8NGY7 276 aa5.12□□□□□ -1.59
USP38-203ENST00000511739 MYOZ3Q8TDC0 251 aa5.12□□□□□ -1.59
USP38-203ENST00000511739 ZNF707Q96C28 371 aaPredicted RBP5.12□□□□□ -1.59
USP38-203ENST00000511739 HARBI1Q96MB7 349 aa5.12□□□□□ -1.59
USP38-203ENST00000511739 RPP25Q9BUL9 199 aaKnown RBP5.12□□□□□ -1.59
USP38-203ENST00000511739 IFITM5A6NNB3 132 aa5.12□□□□□ -1.59
USP38-203ENST00000511739 SNRPGP15A8MWD9 76 aa5.12□□□□□ -1.59
USP38-203ENST00000511739 TMEM262E9PQX1 116 aa5.12□□□□□ -1.59
USP38-203ENST00000511739 CDK5R1Q15078 307 aa5.12□□□□□ -1.59
USP38-203ENST00000511739 SP6Q3SY56 376 aa5.12□□□□□ -1.59
USP38-203ENST00000511739 DLEU7Q6UYE1 221 aa5.12□□□□□ -1.59
USP38-203ENST00000511739 OR13F1Q8NGS4 319 aa5.12□□□□□ -1.59
USP38-203ENST00000511739 OR5H6Q8NGV6 325 aa5.12□□□□□ -1.59
USP38-203ENST00000511739 SNRNP40Q96DI7 357 aaKnown RBP5.12□□□□□ -1.59
USP38-203ENST00000511739 LINC00615Q96LM1 132 aaPredicted RBP5.12□□□□□ -1.59
USP38-203ENST00000511739 CCL19Q99731 98 aa5.12□□□□□ -1.59
USP38-203ENST00000511739 RSG1Q9BU20 258 aa5.12□□□□□ -1.59
USP38-203ENST00000511739 ZNF416Q9BWM5 594 aa5.12□□□□□ -1.59
USP38-203ENST00000511739 DICER1Q9UPY3 1922 aaKnown RBP5.12□□□□□ -1.59
USP38-203ENST00000511739 RALGAPA2Q2PPJ7 1873 aa5.11□□□□□ -1.59
USP38-203ENST00000511739 A0A1B0GTH9 108 aa5.11□□□□□ -1.59
USP38-203ENST00000511739 C7orf72A4D263 438 aa5.11□□□□□ -1.59
USP38-203ENST00000511739 OOEPA6NGQ2 149 aa5.11□□□□□ -1.59
USP38-203ENST00000511739 KIAA1324LA8MWY0 1029 aaPredicted RBP5.11□□□□□ -1.59
USP38-203ENST00000511739 WNT9BO14905 357 aa5.11□□□□□ -1.59
USP38-203ENST00000511739 CTSLP07711 333 aa5.11□□□□□ -1.59
USP38-203ENST00000511739 PATE4P0C8F1 98 aa5.11□□□□□ -1.59
USP38-203ENST00000511739 STAG3L2P0CL84 134 aa5.11□□□□□ -1.59
USP38-203ENST00000511739 GZMHP20718 246 aa5.11□□□□□ -1.59
USP38-203ENST00000511739 COL8A1P27658 744 aa5.11□□□□□ -1.59
USP38-203ENST00000511739 RAC3P60763 192 aa5.11□□□□□ -1.59
USP38-203ENST00000511739 DGCR2P98153 550 aa5.11□□□□□ -1.59
USP38-203ENST00000511739 ZNF117Q03924 483 aa5.11□□□□□ -1.59
USP38-203ENST00000511739 RIGQ13278 110 aa5.11□□□□□ -1.59
USP38-203ENST00000511739 FAM106AQ4KMX7 169 aa5.11□□□□□ -1.59
USP38-203ENST00000511739 ZNF841Q6ZN19 808 aa5.11□□□□□ -1.59
USP38-203ENST00000511739 OR4B1Q8NGF8 309 aa5.11□□□□□ -1.59
USP38-203ENST00000511739 RBPMSQ93062 196 aaKnown RBP5.11□□□□□ -1.59
USP38-203ENST00000511739 FAM210BQ96KR6 192 aa5.11□□□□□ -1.59
USP38-203ENST00000511739 C16orf92Q96LL3 132 aa5.11□□□□□ -1.59
USP38-203ENST00000511739 DUX5Q96PT3 197 aa5.11□□□□□ -1.59
USP38-203ENST00000511739 PLA2G2FQ9BZM2 168 aa5.11□□□□□ -1.59
USP38-203ENST00000511739 NAA60Q9H7X0 242 aa5.11□□□□□ -1.59
USP38-203ENST00000511739 SRD5A3Q9H8P0 318 aa5.11□□□□□ -1.59
USP38-203ENST00000511739 RASL12Q9NYN1 266 aa5.11□□□□□ -1.59
USP38-203ENST00000511739 HILPDAQ9Y5L2 63 aa5.11□□□□□ -1.59
USP38-203ENST00000511739 A0A1B0GUH1 482 aa5.11□□□□□ -1.59
USP38-203ENST00000511739 FTH1P19P0C7X4 201 aa5.11□□□□□ -1.59
USP38-203ENST00000511739 JUNBP17275 347 aaPredicted RBP5.11□□□□□ -1.59
USP38-203ENST00000511739 CTGFP29279 349 aa5.11□□□□□ -1.59
USP38-203ENST00000511739 RELAQ04206 551 aa5.11□□□□□ -1.59
USP38-203ENST00000511739 ETFDHQ16134 617 aa5.11□□□□□ -1.59
USP38-203ENST00000511739 TMEM215Q68D42 235 aa5.11□□□□□ -1.59
USP38-203ENST00000511739 SLC7A5P1Q8MH63 180 aa5.11□□□□□ -1.59
USP38-203ENST00000511739 FAM26EQ8N5C1 309 aa5.11□□□□□ -1.59
USP38-203ENST00000511739 COMMD1Q8N668 190 aa5.11□□□□□ -1.59
USP38-203ENST00000511739 OR4P4Q8NGL7 312 aa5.11□□□□□ -1.59
USP38-203ENST00000511739 R3HDM4Q96D70 268 aa5.11□□□□□ -1.59
USP38-203ENST00000511739 MOGAT1Q96PD6 335 aa5.11□□□□□ -1.59
USP38-203ENST00000511739 VAMP8Q9BV40 100 aa5.11□□□□□ -1.59
USP38-203ENST00000511739 SEC11CQ9BY50 192 aa5.11□□□□□ -1.59
USP38-203ENST00000511739 OR2J1Q9GZK6 312 aa5.11□□□□□ -1.59
USP38-203ENST00000511739 BCL2L10Q9HD36 194 aa5.11□□□□□ -1.59
USP38-203ENST00000511739 TMEM167BQ9NRX6 74 aa5.11□□□□□ -1.59
USP38-203ENST00000511739 SLC25A10Q9UBX3 287 aaPredicted RBP5.11□□□□□ -1.59
USP38-203ENST00000511739 CACNG5Q9UF02 275 aa5.11□□□□□ -1.59
USP38-203ENST00000511739 TINAGQ9UJW2 476 aa5.11□□□□□ -1.59
USP38-203ENST00000511739 COLQQ9Y215 455 aaPredicted RBP5.11□□□□□ -1.59
USP38-203ENST00000511739 IGLV3-16A0A075B6K0 115 aa5.11□□□□□ -1.59
USP38-203ENST00000511739 IGKV3OR2-268A0A0C4DH90 116 aa5.11□□□□□ -1.59
USP38-203ENST00000511739 TRIM77I1YAP6 450 aa5.11□□□□□ -1.59
USP38-203ENST00000511739 KLF7O75840 302 aaPredicted RBP5.11□□□□□ -1.59
USP38-203ENST00000511739 PNPP00491 289 aa5.11□□□□□ -1.59
USP38-203ENST00000511739 WNT1P04628 370 aa5.11□□□□□ -1.59
USP38-203ENST00000511739 RPS4Y1P22090 263 aaKnown RBP5.11□□□□□ -1.59
USP38-203ENST00000511739 PPOXP50336 477 aa5.11□□□□□ -1.59
USP38-203ENST00000511739 YBX1P67809 324 aaKnown RBP5.11□□□□□ -1.59
USP38-203ENST00000511739 LRRC75BQ2VPJ9 315 aa5.11□□□□□ -1.59
USP38-203ENST00000511739 OTOSQ8NHW6 89 aa5.11□□□□□ -1.59
USP38-203ENST00000511739 TECRQ9NZ01 308 aaKnown RBP5.11□□□□□ -1.59
USP38-203ENST00000511739 TMED3Q9Y3Q3 217 aa5.11□□□□□ -1.59
USP38-203ENST00000511739 IGSF23A1L1A6 192 aa5.11□□□□□ -1.59
USP38-203ENST00000511739 MFNGO00587 321 aa5.11□□□□□ -1.59
USP38-203ENST00000511739 HAND1O96004 215 aa5.11□□□□□ -1.59
USP38-203ENST00000511739 PDLIM4P50479 330 aa5.11□□□□□ -1.59
USP38-203ENST00000511739 BTG1P62324 171 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms