RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 CEACAM19Q7Z692 300 aa11.41□□□□□ -0.58
DDX41-212ENST00000511040 TRAPPC6BQ86SZ2 158 aa11.41□□□□□ -0.58
DDX41-212ENST00000511040 PPP1R35Q8TAP8 253 aa11.41□□□□□ -0.58
DDX41-212ENST00000511040 UFD1Q92890 307 aa11.41□□□□□ -0.58
DDX41-212ENST00000511040 GCDHQ92947 438 aaPredicted RBP11.41□□□□□ -0.58
DDX41-212ENST00000511040 SLC25A28Q96A46 364 aa11.41□□□□□ -0.58
DDX41-212ENST00000511040 METTL9Q9H1A3 318 aa11.41□□□□□ -0.58
DDX41-212ENST00000511040 PRDM13Q9H4Q3 707 aa11.41□□□□□ -0.58
DDX41-212ENST00000511040 UNKLQ9H9P5 680 aaKnown RBP11.41□□□□□ -0.58
DDX41-212ENST00000511040 FOXJ3Q9UPW0 622 aa11.41□□□□□ -0.58
DDX41-212ENST00000511040 SF3B6Q9Y3B4 125 aaKnown RBP11.41□□□□□ -0.58
DDX41-212ENST00000511040 TRAV24A0A0B4J272 114 aa11.4□□□□□ -0.58
DDX41-212ENST00000511040 A0A1W2PP11 408 aa11.4□□□□□ -0.58
DDX41-212ENST00000511040 hCG_1809904A0A1W2PP81 198 aa11.4□□□□□ -0.58
DDX41-212ENST00000511040 A0A1W2PPE2 198 aa11.4□□□□□ -0.58
DDX41-212ENST00000511040 A0A1W2PR64 198 aa11.4□□□□□ -0.58
DDX41-212ENST00000511040 A0A1W2PRV1 198 aa11.4□□□□□ -0.58
DDX41-212ENST00000511040 hADV38S2A0JD32 116 aa11.4□□□□□ -0.58
DDX41-212ENST00000511040 C17orf98A8MV24 154 aa11.4□□□□□ -0.58
DDX41-212ENST00000511040 IGHV4-59P01825 116 aa11.4□□□□□ -0.58
DDX41-212ENST00000511040 RNASE1P07998 156 aaKnown RBP11.4□□□□□ -0.58
DDX41-212ENST00000511040 LMO1P25800 156 aa11.4□□□□□ -0.58
DDX41-212ENST00000511040 PAX6P26367 422 aa11.4□□□□□ -0.58
DDX41-212ENST00000511040 MAPK3P27361 379 aaPredicted RBP11.4□□□□□ -0.58
DDX41-212ENST00000511040 GLIPR1P48060 266 aa11.4□□□□□ -0.58
DDX41-212ENST00000511040 GP2P55259 537 aaKnown RBP11.4□□□□□ -0.58
DDX41-212ENST00000511040 RPS25P62851 125 aaKnown RBP11.4□□□□□ -0.58
DDX41-212ENST00000511040 MEF2CQ06413 473 aaPredicted RBP11.4□□□□□ -0.58
DDX41-212ENST00000511040 PAN3Q58A45 887 aaKnown RBP11.4□□□□□ -0.58
DDX41-212ENST00000511040 UNQ9370/PRO34162Q6UXP9 181 aa11.4□□□□□ -0.58
DDX41-212ENST00000511040 COQ2Q96H96 371 aa11.4□□□□□ -0.58
DDX41-212ENST00000511040 ZNF714Q96N38 554 aa11.4□□□□□ -0.58
DDX41-212ENST00000511040 S100A13Q99584 98 aa11.4□□□□□ -0.58
DDX41-212ENST00000511040 PPIL3Q9H2H8 161 aaKnown RBP11.4□□□□□ -0.58
DDX41-212ENST00000511040 BLOC1S6Q9UL45 172 aa11.4□□□□□ -0.58
DDX41-212ENST00000511040 MRPS28Q9Y2Q9 187 aaKnown RBP11.4□□□□□ -0.58
DDX41-212ENST00000511040 DSCAML1Q8TD84 2053 aa11.4□□□□□ -0.58
DDX41-212ENST00000511040 CLDN34H7C241 214 aa11.39□□□□□ -0.59
DDX41-212ENST00000511040 PAHP00439 452 aa11.39□□□□□ -0.59
DDX41-212ENST00000511040 CSTBP04080 98 aaKnown RBP11.39□□□□□ -0.59
DDX41-212ENST00000511040 TPBGQ13641 420 aa11.39□□□□□ -0.59
DDX41-212ENST00000511040 IL13RA2Q14627 380 aa11.39□□□□□ -0.59
DDX41-212ENST00000511040 KRBOX4Q5JUW0 171 aa11.39□□□□□ -0.59
DDX41-212ENST00000511040 GLIPR1L1Q6UWM5 242 aa11.39□□□□□ -0.59
DDX41-212ENST00000511040 OSR2Q8N2R0 312 aa11.39□□□□□ -0.59
DDX41-212ENST00000511040 MS4A15Q8N5U1 240 aa11.39□□□□□ -0.59
DDX41-212ENST00000511040 CHST4Q8NCG5 386 aa11.39□□□□□ -0.59
DDX41-212ENST00000511040 OR4D6Q8NGJ1 314 aa11.39□□□□□ -0.59
DDX41-212ENST00000511040 OR51T1Q8NGJ9 327 aa11.39□□□□□ -0.59
DDX41-212ENST00000511040 CHIAQ9BZP6 476 aa11.39□□□□□ -0.59
DDX41-212ENST00000511040 Q9H521 79 aa11.39□□□□□ -0.59
DDX41-212ENST00000511040 HEXA-AS1Q9H8Q6 139 aa11.39□□□□□ -0.59
DDX41-212ENST00000511040 ZMAT3Q9HA38 289 aaKnown RBP11.39□□□□□ -0.59
DDX41-212ENST00000511040 IL36GQ9NZH8 169 aa11.39□□□□□ -0.59
DDX41-212ENST00000511040 ST3GAL6Q9Y274 331 aa11.39□□□□□ -0.59
DDX41-212ENST00000511040 LINC00312Q9Y6C7 94 aa11.39□□□□□ -0.59
DDX41-212ENST00000511040 TRGV10A0A0A0MS01 117 aa11.38□□□□□ -0.59
DDX41-212ENST00000511040 ODAMA1E959 279 aa11.38□□□□□ -0.59
DDX41-212ENST00000511040 TMEM89A2RUT3 159 aa11.38□□□□□ -0.59
DDX41-212ENST00000511040 GEMIN2O14893 280 aaKnown RBP11.38□□□□□ -0.59
DDX41-212ENST00000511040 DENRO43583 198 aaKnown RBP11.38□□□□□ -0.59
DDX41-212ENST00000511040 MMP23AO75900 390 aa11.38□□□□□ -0.59
DDX41-212ENST00000511040 FBP1P09467 338 aa11.38□□□□□ -0.59
DDX41-212ENST00000511040 IGHV1-8P0DP01 117 aa11.38□□□□□ -0.59
DDX41-212ENST00000511040 ERP29P30040 261 aaKnown RBP11.38□□□□□ -0.59
DDX41-212ENST00000511040 RBM11P57052 281 aaKnown RBP11.38□□□□□ -0.59
DDX41-212ENST00000511040 MLLT11Q13015 90 aaPredicted RBP11.38□□□□□ -0.59
DDX41-212ENST00000511040 GPR50Q13585 617 aa11.38□□□□□ -0.59
DDX41-212ENST00000511040 PRAMEF5Q5TYX0 476 aa11.38□□□□□ -0.59
DDX41-212ENST00000511040 AWAT2Q6E213 333 aa11.38□□□□□ -0.59
DDX41-212ENST00000511040 C16orf87Q6PH81 154 aa11.38□□□□□ -0.59
DDX41-212ENST00000511040 C12orf54Q6X4T0 127 aa11.38□□□□□ -0.59
DDX41-212ENST00000511040 LRRTM1Q86UE6 522 aa11.38□□□□□ -0.59
DDX41-212ENST00000511040 Q8NFD4 153 aa11.38□□□□□ -0.59
DDX41-212ENST00000511040 SSMEM1Q8WWF3 244 aa11.38□□□□□ -0.59
DDX41-212ENST00000511040 THRSPQ92748 146 aa11.38□□□□□ -0.59
DDX41-212ENST00000511040 AJUBAQ96IF1 538 aa11.38□□□□□ -0.59
DDX41-212ENST00000511040 MGLLQ99685 303 aa11.38□□□□□ -0.59
DDX41-212ENST00000511040 BANF2Q9H503 90 aa11.38□□□□□ -0.59
DDX41-212ENST00000511040 TCF7L1Q9HCS4 588 aa11.38□□□□□ -0.59
DDX41-212ENST00000511040 TRAV39A0A0B4J263 110 aa11.37□□□□□ -0.59
DDX41-212ENST00000511040 FUOMA2VDF0 154 aa11.37□□□□□ -0.59
DDX41-212ENST00000511040 FAM181BA6NEQ2 426 aa11.37□□□□□ -0.59
DDX41-212ENST00000511040 OR7C1O76099 320 aaPredicted RBP11.37□□□□□ -0.59
DDX41-212ENST00000511040 ARG1P05089 322 aa11.37□□□□□ -0.59
DDX41-212ENST00000511040 CPEP16870 476 aa11.37□□□□□ -0.59
DDX41-212ENST00000511040 OMGP23515 440 aa11.37□□□□□ -0.59
DDX41-212ENST00000511040 IER3P46695 156 aa11.37□□□□□ -0.59
DDX41-212ENST00000511040 DYNC1I2Q13409 638 aaKnown RBP11.37□□□□□ -0.59
DDX41-212ENST00000511040 TBCEQ15813 527 aaPredicted RBP11.37□□□□□ -0.59
DDX41-212ENST00000511040 TAF9Q16594 264 aa11.37□□□□□ -0.59
DDX41-212ENST00000511040 MIDNQ504T8 468 aa11.37□□□□□ -0.59
DDX41-212ENST00000511040 HSD17B12Q53GQ0 312 aa11.37□□□□□ -0.59
DDX41-212ENST00000511040 KIAA2026Q5HYC2 2103 aa11.37□□□□□ -0.59
DDX41-212ENST00000511040 BRICD5Q6PL45 260 aa11.37□□□□□ -0.59
DDX41-212ENST00000511040 BAIAP2L2Q6UXY1 529 aa11.37□□□□□ -0.59
DDX41-212ENST00000511040 TMEM91Q6ZNR0 172 aa11.37□□□□□ -0.59
DDX41-212ENST00000511040 ZNF367Q7RTV3 350 aa11.37□□□□□ -0.59
DDX41-212ENST00000511040 LYPD6Q86Y78 171 aa11.37□□□□□ -0.59
DDX41-212ENST00000511040 LDLRAD3Q86YD5 345 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms