RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 SLC35B4Q969S0 331 aa4.48□□□□□ -1.69
USP53-206ENST00000510737 PPP3R2Q96LZ3 170 aa4.48□□□□□ -1.69
USP53-206ENST00000510737 TMEM43Q9BTV4 400 aa4.48□□□□□ -1.69
USP53-206ENST00000510737 ELL3Q9HB65 397 aaPredicted RBP4.48□□□□□ -1.69
USP53-206ENST00000510737 EMCNQ9ULC0 261 aa4.48□□□□□ -1.69
USP53-206ENST00000510737 MYCBP2O75592 4640 aa4.48□□□□□ -1.69
USP53-206ENST00000510737 LRP1BQ9NZR2 4599 aa4.48□□□□□ -1.69
USP53-206ENST00000510737 DNAH6Q9C0G6 4158 aa4.47□□□□□ -1.69
USP53-206ENST00000510737 A0A0B4J2E0 115 aa4.47□□□□□ -1.69
USP53-206ENST00000510737 A0A1B0GX12 115 aa4.47□□□□□ -1.69
USP53-206ENST00000510737 OR6C6A6NF89 314 aa4.47□□□□□ -1.69
USP53-206ENST00000510737 C12orf71A8MTZ7 269 aa4.47□□□□□ -1.69
USP53-206ENST00000510737 SGCEO43556 437 aa4.47□□□□□ -1.69
USP53-206ENST00000510737 DOK2O60496 412 aa4.47□□□□□ -1.69
USP53-206ENST00000510737 TPST1O60507 370 aa4.47□□□□□ -1.69
USP53-206ENST00000510737 BRI3O95415 125 aa4.47□□□□□ -1.69
USP53-206ENST00000510737 FGF4P08620 206 aa4.47□□□□□ -1.69
USP53-206ENST00000510737 CDKN2CP42773 168 aa4.47□□□□□ -1.69
USP53-206ENST00000510737 OR3A4PP47883 348 aa4.47□□□□□ -1.69
USP53-206ENST00000510737 SERPINB9P50453 376 aa4.47□□□□□ -1.69
USP53-206ENST00000510737 DNAJB13P59910 316 aa4.47□□□□□ -1.69
USP53-206ENST00000510737 LYZP61626 148 aa4.47□□□□□ -1.69
USP53-206ENST00000510737 GK2Q14410 553 aaPredicted RBP4.47□□□□□ -1.69
USP53-206ENST00000510737 OR1Q1Q15612 314 aa4.47□□□□□ -1.69
USP53-206ENST00000510737 CCDC92Q53HC0 331 aaPredicted RBP4.47□□□□□ -1.69
USP53-206ENST00000510737 ZYG11AQ6WRX3 759 aa4.47□□□□□ -1.69
USP53-206ENST00000510737 TIFABQ6ZNK6 161 aa4.47□□□□□ -1.69
USP53-206ENST00000510737 NAA40Q86UY6 237 aa4.47□□□□□ -1.69
USP53-206ENST00000510737 FNDC5Q8NAU1 212 aa4.47□□□□□ -1.69
USP53-206ENST00000510737 RHOXF1Q8NHV9 184 aa4.47□□□□□ -1.69
USP53-206ENST00000510737 TWIST2Q8WVJ9 160 aa4.47□□□□□ -1.69
USP53-206ENST00000510737 NOL4LQ96MY1 436 aaPredicted RBP4.47□□□□□ -1.69
USP53-206ENST00000510737 PITX2Q99697 317 aa4.47□□□□□ -1.69
USP53-206ENST00000510737 FUT8Q9BYC5 575 aa4.47□□□□□ -1.69
USP53-206ENST00000510737 OPA3Q9H6K4 179 aa4.47□□□□□ -1.69
USP53-206ENST00000510737 ARMC7Q9H6L4 198 aa4.47□□□□□ -1.69
USP53-206ENST00000510737 Q9H8V8 135 aa4.47□□□□□ -1.69
USP53-206ENST00000510737 JPT2Q9H910 190 aa4.47□□□□□ -1.69
USP53-206ENST00000510737 ZNF391Q9UJN7 358 aa4.47□□□□□ -1.69
USP53-206ENST00000510737 WDR83OSQ9Y284 106 aa4.47□□□□□ -1.69
USP53-206ENST00000510737 IFT52Q9Y366 437 aa4.47□□□□□ -1.69
USP53-206ENST00000510737 A0A1W2PRG6 482 aa4.46□□□□□ -1.7
USP53-206ENST00000510737 hCG_1807616A0A1W2PRN6 198 aa4.46□□□□□ -1.7
USP53-206ENST00000510737 ODF3BA8MYP8 253 aa4.46□□□□□ -1.7
USP53-206ENST00000510737 H3BSH0 61 aa4.46□□□□□ -1.7
USP53-206ENST00000510737 GMDSO60547 372 aa4.46□□□□□ -1.7
USP53-206ENST00000510737 FMO6PO60774 539 aa4.46□□□□□ -1.7
USP53-206ENST00000510737 LYPD3O95274 346 aa4.46□□□□□ -1.7
USP53-206ENST00000510737 ARG1P05089 322 aa4.46□□□□□ -1.7
USP53-206ENST00000510737 BCHEP06276 602 aa4.46□□□□□ -1.7
USP53-206ENST00000510737 MYL2P10916 166 aa4.46□□□□□ -1.7
USP53-206ENST00000510737 ETS2P15036 469 aa4.46□□□□□ -1.7
USP53-206ENST00000510737 ZNF19P17023 458 aa4.46□□□□□ -1.7
USP53-206ENST00000510737 MSR1P21757 451 aa4.46□□□□□ -1.7
USP53-206ENST00000510737 AZGP1P25311 298 aaKnown RBP4.46□□□□□ -1.7
USP53-206ENST00000510737 SERPINB5P36952 375 aa4.46□□□□□ -1.7
USP53-206ENST00000510737 SLC25A1P53007 311 aa4.46□□□□□ -1.7
USP53-206ENST00000510737 CRISP3P54108 245 aa4.46□□□□□ -1.7
USP53-206ENST00000510737 NAA20P61599 178 aa4.46□□□□□ -1.7
USP53-206ENST00000510737 RPL18Q07020 188 aaKnown RBP4.46□□□□□ -1.7
USP53-206ENST00000510737 CD47Q08722 323 aa4.46□□□□□ -1.7
USP53-206ENST00000510737 C9orf152Q5JTZ5 239 aa4.46□□□□□ -1.7
USP53-206ENST00000510737 CFAP157Q5JU67 520 aa4.46□□□□□ -1.7
USP53-206ENST00000510737 ANXA8L1Q5VT79 327 aa4.46□□□□□ -1.7
USP53-206ENST00000510737 STUMQ69YW2 141 aa4.46□□□□□ -1.7
USP53-206ENST00000510737 LGALS9CQ6DKI2 356 aa4.46□□□□□ -1.7
USP53-206ENST00000510737 ZNF621Q6ZSS3 439 aa4.46□□□□□ -1.7
USP53-206ENST00000510737 WDR86Q86TI4 376 aa4.46□□□□□ -1.7
USP53-206ENST00000510737 ZNF429Q86V71 674 aa4.46□□□□□ -1.7
USP53-206ENST00000510737 SLC35F6Q8N357 371 aa4.46□□□□□ -1.7
USP53-206ENST00000510737 FAM71E2Q8N5Q1 922 aa4.46□□□□□ -1.7
USP53-206ENST00000510737 SPC24Q8NBT2 197 aa4.46□□□□□ -1.7
USP53-206ENST00000510737 OR10G7Q8NGN6 311 aa4.46□□□□□ -1.7
USP53-206ENST00000510737 OR4Q3Q8NH05 313 aa4.46□□□□□ -1.7
USP53-206ENST00000510737 OR8U1Q8NH10 309 aa4.46□□□□□ -1.7
USP53-206ENST00000510737 OR1F12Q8NHA8 337 aa4.46□□□□□ -1.7
USP53-206ENST00000510737 OR5K1Q8NHB7 308 aa4.46□□□□□ -1.7
USP53-206ENST00000510737 LRRC29Q8WV35 223 aa4.46□□□□□ -1.7
USP53-206ENST00000510737 ST6GALNAC6Q969X2 333 aa4.46□□□□□ -1.7
USP53-206ENST00000510737 APOBEC3DQ96AK3 386 aaPredicted RBP4.46□□□□□ -1.7
USP53-206ENST00000510737 SLCO4A1Q96BD0 722 aa4.46□□□□□ -1.7
USP53-206ENST00000510737 GAFA1Q96PS6 74 aa4.46□□□□□ -1.7
USP53-206ENST00000510737 NAPGQ99747 312 aaPredicted RBP4.46□□□□□ -1.7
USP53-206ENST00000510737 HCAR1Q9BXC0 346 aa4.46□□□□□ -1.7
USP53-206ENST00000510737 TXNIPQ9H3M7 391 aa4.46□□□□□ -1.7
USP53-206ENST00000510737 RNPEPL1Q9HAU8 725 aa4.46□□□□□ -1.7
USP53-206ENST00000510737 TMEM27Q9HBJ8 222 aa4.46□□□□□ -1.7
USP53-206ENST00000510737 POLE4Q9NR33 117 aa4.46□□□□□ -1.7
USP53-206ENST00000510737 C19orf12Q9NSK7 152 aa4.46□□□□□ -1.7
USP53-206ENST00000510737 NINJ2Q9NZG7 142 aa4.46□□□□□ -1.7
USP53-206ENST00000510737 CALML5Q9NZT1 146 aa4.46□□□□□ -1.7
USP53-206ENST00000510737 P2RX2Q9UBL9 471 aa4.46□□□□□ -1.7
USP53-206ENST00000510737 LINC00527Q9UJ94 153 aa4.46□□□□□ -1.7
USP53-206ENST00000510737 AURKCQ9UQB9 309 aa4.46□□□□□ -1.7
USP53-206ENST00000510737 TBL2Q9Y4P3 447 aaKnown RBP4.46□□□□□ -1.7
USP53-206ENST00000510737 HILPDAQ9Y5L2 63 aa4.46□□□□□ -1.7
USP53-206ENST00000510737 CD300LBA8K4G0 201 aa4.45□□□□□ -1.7
USP53-206ENST00000510737 CCRL2O00421 344 aa4.45□□□□□ -1.7
USP53-206ENST00000510737 CHRNGP07510 517 aa4.45□□□□□ -1.7
USP53-206ENST00000510737 PGA5P0DJD9 388 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms