RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 PAHP00439 452 aa7.17□□□□□ -1.26
PDLIM5-213ENST00000509357 CD2P06729 351 aa7.17□□□□□ -1.26
PDLIM5-213ENST00000509357 CD36P16671 472 aa7.17□□□□□ -1.26
PDLIM5-213ENST00000509357 PRKACAP17612 351 aa7.17□□□□□ -1.26
PDLIM5-213ENST00000509357 CALRP27797 417 aaKnown RBP7.17□□□□□ -1.26
PDLIM5-213ENST00000509357 ZNF93P35789 620 aaPredicted RBP7.17□□□□□ -1.26
PDLIM5-213ENST00000509357 PTGFRP43088 359 aa7.17□□□□□ -1.26
PDLIM5-213ENST00000509357 CLDN12P56749 244 aa7.17□□□□□ -1.26
PDLIM5-213ENST00000509357 GUCA2AQ02747 115 aa7.17□□□□□ -1.26
PDLIM5-213ENST00000509357 COL10A1Q03692 680 aa7.17□□□□□ -1.26
PDLIM5-213ENST00000509357 ZNF146Q15072 292 aa7.17□□□□□ -1.26
PDLIM5-213ENST00000509357 HSD17B12Q53GQ0 312 aa7.17□□□□□ -1.26
PDLIM5-213ENST00000509357 C1orf100Q5SVJ3 147 aa7.17□□□□□ -1.26
PDLIM5-213ENST00000509357 UTF1Q5T230 341 aa7.17□□□□□ -1.26
PDLIM5-213ENST00000509357 SIGIRRQ6IA17 410 aa7.17□□□□□ -1.26
PDLIM5-213ENST00000509357 FIP1L1Q6UN15 594 aaKnown RBP7.17□□□□□ -1.26
PDLIM5-213ENST00000509357 Q6YL49 198 aa7.17□□□□□ -1.26
PDLIM5-213ENST00000509357 Q6ZPA2 131 aa7.17□□□□□ -1.26
PDLIM5-213ENST00000509357 SAXO1Q8IYX7 474 aa7.17□□□□□ -1.26
PDLIM5-213ENST00000509357 ZNF561Q8N587 486 aa7.17□□□□□ -1.26
PDLIM5-213ENST00000509357 KIR3DL3Q8N743 410 aa7.17□□□□□ -1.26
PDLIM5-213ENST00000509357 PXT1Q8NFP0 134 aa7.17□□□□□ -1.26
PDLIM5-213ENST00000509357 OR4S1Q8NGB4 309 aa7.17□□□□□ -1.26
PDLIM5-213ENST00000509357 OR13F1Q8NGS4 319 aa7.17□□□□□ -1.26
PDLIM5-213ENST00000509357 SSMEM1Q8WWF3 244 aa7.17□□□□□ -1.26
PDLIM5-213ENST00000509357 FCGR1BQ92637 280 aa7.17□□□□□ -1.26
PDLIM5-213ENST00000509357 EMG1Q92979 244 aaKnown RBP7.17□□□□□ -1.26
PDLIM5-213ENST00000509357 METTL8Q9H825 291 aaKnown RBP7.17□□□□□ -1.26
PDLIM5-213ENST00000509357 TRBV23-1A0A0A0MS06 115 aa7.16□□□□□ -1.26
PDLIM5-213ENST00000509357 TRAV24A0A0B4J272 114 aa7.16□□□□□ -1.26
PDLIM5-213ENST00000509357 hCG_1809904A0A1W2PP81 198 aa7.16□□□□□ -1.26
PDLIM5-213ENST00000509357 A0A1W2PPE2 198 aa7.16□□□□□ -1.26
PDLIM5-213ENST00000509357 A0A1W2PR64 198 aa7.16□□□□□ -1.26
PDLIM5-213ENST00000509357 A0A1W2PRV1 198 aa7.16□□□□□ -1.26
PDLIM5-213ENST00000509357 FAM181BA6NEQ2 426 aa7.16□□□□□ -1.26
PDLIM5-213ENST00000509357 M0R1W7 72 aa7.16□□□□□ -1.26
PDLIM5-213ENST00000509357 SLC33A1O00400 549 aaPredicted RBP7.16□□□□□ -1.26
PDLIM5-213ENST00000509357 NPFFO15130 113 aa7.16□□□□□ -1.26
PDLIM5-213ENST00000509357 LDLRAD4O15165 306 aa7.16□□□□□ -1.26
PDLIM5-213ENST00000509357 SLC22A1O15245 554 aa7.16□□□□□ -1.26
PDLIM5-213ENST00000509357 OR2H2O95918 312 aa7.16□□□□□ -1.26
PDLIM5-213ENST00000509357 HAND1O96004 215 aa7.16□□□□□ -1.26
PDLIM5-213ENST00000509357 KNG1P01042 644 aa7.16□□□□□ -1.26
PDLIM5-213ENST00000509357 MELTFP08582 738 aa7.16□□□□□ -1.26
PDLIM5-213ENST00000509357 TMEM225BP0DP42 221 aa7.16□□□□□ -1.26
PDLIM5-213ENST00000509357 VSIG8P0DPA2 414 aa7.16□□□□□ -1.26
PDLIM5-213ENST00000509357 SLC2A2P11168 524 aaPredicted RBP7.16□□□□□ -1.26
PDLIM5-213ENST00000509357 OMGP23515 440 aa7.16□□□□□ -1.26
PDLIM5-213ENST00000509357 FGF9P31371 208 aaPredicted RBP7.16□□□□□ -1.26
PDLIM5-213ENST00000509357 OR3A1P47881 315 aa7.16□□□□□ -1.26
PDLIM5-213ENST00000509357 RPL31P62899 125 aaKnown RBP7.16□□□□□ -1.26
PDLIM5-213ENST00000509357 KLRD1Q13241 179 aa7.16□□□□□ -1.26
PDLIM5-213ENST00000509357 P2RY14Q15391 338 aa7.16□□□□□ -1.26
PDLIM5-213ENST00000509357 NCR3LG1Q68D85 454 aa7.16□□□□□ -1.26
PDLIM5-213ENST00000509357 ELP2Q6IA86 826 aa7.16□□□□□ -1.26
PDLIM5-213ENST00000509357 GLIPR1L1Q6UWM5 242 aa7.16□□□□□ -1.26
PDLIM5-213ENST00000509357 C5orf24Q7Z6I8 188 aa7.16□□□□□ -1.26
PDLIM5-213ENST00000509357 FAM58AQ8N1B3 248 aa7.16□□□□□ -1.26
PDLIM5-213ENST00000509357 C11orf42Q8N5U0 333 aa7.16□□□□□ -1.26
PDLIM5-213ENST00000509357 TMEM86BQ8N661 226 aa7.16□□□□□ -1.26
PDLIM5-213ENST00000509357 Q8N7P7 452 aa7.16□□□□□ -1.26
PDLIM5-213ENST00000509357 TPRX1Q8N7U7 411 aa7.16□□□□□ -1.26
PDLIM5-213ENST00000509357 ASCC1Q8N9N2 400 aaKnown RBP7.16□□□□□ -1.26
PDLIM5-213ENST00000509357 ZSCAN4Q8NAM6 433 aaPredicted RBP7.16□□□□□ -1.26
PDLIM5-213ENST00000509357 OR4M1Q8NGD0 313 aa7.16□□□□□ -1.26
PDLIM5-213ENST00000509357 OR51T1Q8NGJ9 327 aa7.16□□□□□ -1.26
PDLIM5-213ENST00000509357 OR5D13Q8NGL4 314 aa7.16□□□□□ -1.26
PDLIM5-213ENST00000509357 C8orf46Q8TAG6 207 aa7.16□□□□□ -1.26
PDLIM5-213ENST00000509357 PHYHIPQ92561 330 aa7.16□□□□□ -1.26
PDLIM5-213ENST00000509357 TAF15Q92804 592 aaKnown RBP eCLIP7.16□□□□□ -1.26
PDLIM5-213ENST00000509357 COQ2Q96H96 371 aa7.16□□□□□ -1.26
PDLIM5-213ENST00000509357 DMRTB1Q96MA1 342 aa7.16□□□□□ -1.26
PDLIM5-213ENST00000509357 CHCHD6Q9BRQ6 235 aa7.16□□□□□ -1.26
PDLIM5-213ENST00000509357 FAM192AQ9GZU8 254 aa7.16□□□□□ -1.26
PDLIM5-213ENST00000509357 CHST6Q9GZX3 395 aa7.16□□□□□ -1.26
PDLIM5-213ENST00000509357 DPAGT1Q9H3H5 408 aa7.16□□□□□ -1.26
PDLIM5-213ENST00000509357 BANF2Q9H503 90 aa7.16□□□□□ -1.26
PDLIM5-213ENST00000509357 NEK6Q9HC98 313 aa7.16□□□□□ -1.26
PDLIM5-213ENST00000509357 C19orf12Q9NSK7 152 aa7.16□□□□□ -1.26
PDLIM5-213ENST00000509357 IL36GQ9NZH8 169 aa7.16□□□□□ -1.26
PDLIM5-213ENST00000509357 STUB1Q9UNE7 303 aa7.16□□□□□ -1.26
PDLIM5-213ENST00000509357 GSTK1Q9Y2Q3 226 aa7.16□□□□□ -1.26
PDLIM5-213ENST00000509357 KIAA2026Q5HYC2 2103 aa7.16□□□□□ -1.26
PDLIM5-213ENST00000509357 MEIOCA2RUB1 952 aa7.15□□□□□ -1.26
PDLIM5-213ENST00000509357 FOXI3A8MTJ6 420 aaPredicted RBP7.15□□□□□ -1.26
PDLIM5-213ENST00000509357 TMEM14DPA8MWL7 114 aa7.15□□□□□ -1.26
PDLIM5-213ENST00000509357 RNASEK-C17orf49H0YIS7 233 aa7.15□□□□□ -1.26
PDLIM5-213ENST00000509357 SIRPB1O00241 398 aa7.15□□□□□ -1.26
PDLIM5-213ENST00000509357 GEMIN2O14893 280 aaKnown RBP7.15□□□□□ -1.26
PDLIM5-213ENST00000509357 IGHV4-59P01825 116 aa7.15□□□□□ -1.26
PDLIM5-213ENST00000509357 FBP1P09467 338 aa7.15□□□□□ -1.26
PDLIM5-213ENST00000509357 SERPINA2P20848 420 aa7.15□□□□□ -1.26
PDLIM5-213ENST00000509357 MAPK3P27361 379 aaPredicted RBP7.15□□□□□ -1.26
PDLIM5-213ENST00000509357 EFNB2P52799 333 aa7.15□□□□□ -1.26
PDLIM5-213ENST00000509357 DLX6P56179 175 aa7.15□□□□□ -1.26
PDLIM5-213ENST00000509357 NCS1P62166 190 aa7.15□□□□□ -1.26
PDLIM5-213ENST00000509357 LSM3P62310 102 aaKnown RBP7.15□□□□□ -1.26
PDLIM5-213ENST00000509357 PPP3R1P63098 170 aa7.15□□□□□ -1.26
PDLIM5-213ENST00000509357 ZNF273Q14593 569 aa7.15□□□□□ -1.26
PDLIM5-213ENST00000509357 TUSC1Q2TAM9 212 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms