RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 CCDC163A0A0D9SF12 145 aa8.72□□□□□ -1.01
PDGFRA-207ENST00000509092 LRRC3CA6NJW4 275 aa8.72□□□□□ -1.01
PDGFRA-207ENST00000509092 EOMESO95936 686 aa8.72□□□□□ -1.01
PDGFRA-207ENST00000509092 CTXN2P0C2S0 81 aa8.72□□□□□ -1.01
PDGFRA-207ENST00000509092 OMGP23515 440 aa8.72□□□□□ -1.01
PDGFRA-207ENST00000509092 IL3RAP26951 378 aa8.72□□□□□ -1.01
PDGFRA-207ENST00000509092 CCR5P51681 352 aa8.72□□□□□ -1.01
PDGFRA-207ENST00000509092 DYNLT3P51808 116 aa8.72□□□□□ -1.01
PDGFRA-207ENST00000509092 CLDN18P56856 261 aa8.72□□□□□ -1.01
PDGFRA-207ENST00000509092 OR5AU1Q8NGC0 362 aa8.72□□□□□ -1.01
PDGFRA-207ENST00000509092 CYYR1Q96J86 154 aa8.72□□□□□ -1.01
PDGFRA-207ENST00000509092 C1orf147Q96MC9 270 aaPredicted RBP8.72□□□□□ -1.01
PDGFRA-207ENST00000509092 REPIN1Q9BWE0 567 aaKnown RBP8.72□□□□□ -1.01
PDGFRA-207ENST00000509092 BANF2Q9H503 90 aa8.72□□□□□ -1.01
PDGFRA-207ENST00000509092 MRPS16Q9Y3D3 137 aaKnown RBP8.72□□□□□ -1.01
PDGFRA-207ENST00000509092 LINC01553A4QN01 128 aa8.72□□□□□ -1.01
PDGFRA-207ENST00000509092 ZNF878C9JN71 531 aa8.72□□□□□ -1.01
PDGFRA-207ENST00000509092 ID2Q02363 134 aa8.72□□□□□ -1.01
PDGFRA-207ENST00000509092 RTP5Q14D33 572 aa8.72□□□□□ -1.01
PDGFRA-207ENST00000509092 NSDHLQ15738 373 aa8.72□□□□□ -1.01
PDGFRA-207ENST00000509092 ZNF141Q15928 474 aa8.72□□□□□ -1.01
PDGFRA-207ENST00000509092 MYPOPQ86VE0 399 aaPredicted RBP8.72□□□□□ -1.01
PDGFRA-207ENST00000509092 MCEMP1Q8IX19 187 aa8.72□□□□□ -1.01
PDGFRA-207ENST00000509092 TMEM252Q8N6L7 170 aa8.72□□□□□ -1.01
PDGFRA-207ENST00000509092 BCL2L2Q92843 193 aaPredicted RBP8.72□□□□□ -1.01
PDGFRA-207ENST00000509092 DAZLQ92904 295 aaKnown RBP8.72□□□□□ -1.01
PDGFRA-207ENST00000509092 CTHRC1Q96CG8 243 aa8.72□□□□□ -1.01
PDGFRA-207ENST00000509092 ADAT3Q96EY9 351 aaPredicted RBP8.72□□□□□ -1.01
PDGFRA-207ENST00000509092 CRISPLD2Q9H0B8 497 aa8.72□□□□□ -1.01
PDGFRA-207ENST00000509092 OR1A2Q9Y585 309 aa8.72□□□□□ -1.01
PDGFRA-207ENST00000509092 LOC101059948A0A1B0GTJ6 334 aa8.71□□□□□ -1.01
PDGFRA-207ENST00000509092 A6NJY4 79 aa8.71□□□□□ -1.01
PDGFRA-207ENST00000509092 VSTM2BA6NLU5 285 aa8.71□□□□□ -1.01
PDGFRA-207ENST00000509092 PNMTP11086 282 aa8.71□□□□□ -1.01
PDGFRA-207ENST00000509092 AADACP22760 399 aa8.71□□□□□ -1.01
PDGFRA-207ENST00000509092 CAPZBP47756 277 aa8.71□□□□□ -1.01
PDGFRA-207ENST00000509092 BAXQ07812 192 aa8.71□□□□□ -1.01
PDGFRA-207ENST00000509092 VAMP3Q15836 100 aa8.71□□□□□ -1.01
PDGFRA-207ENST00000509092 SLC24A5Q71RS6 500 aa8.71□□□□□ -1.01
PDGFRA-207ENST00000509092 CMTM8Q8IZV2 173 aa8.71□□□□□ -1.01
PDGFRA-207ENST00000509092 OR5D14Q8NGL3 314 aa8.71□□□□□ -1.01
PDGFRA-207ENST00000509092 DYRK2Q92630 601 aa8.71□□□□□ -1.01
PDGFRA-207ENST00000509092 SLAMF6Q96DU3 332 aa8.71□□□□□ -1.01
PDGFRA-207ENST00000509092 NUS1Q96E22 293 aa8.71□□□□□ -1.01
PDGFRA-207ENST00000509092 MRPL27Q9P0M9 148 aaKnown RBP8.71□□□□□ -1.01
PDGFRA-207ENST00000509092 CDC42EP3Q9UKI2 254 aa8.71□□□□□ -1.01
PDGFRA-207ENST00000509092 IGLV1-36A0A0B4J1U3 117 aa8.71□□□□□ -1.02
PDGFRA-207ENST00000509092 DUXBA0A1W2PPF3 345 aa8.71□□□□□ -1.02
PDGFRA-207ENST00000509092 OR5B21A6NL26 309 aa8.71□□□□□ -1.02
PDGFRA-207ENST00000509092 FAM166BA8MTA8 275 aa8.71□□□□□ -1.02
PDGFRA-207ENST00000509092 C17orf105B2RV13 164 aa8.71□□□□□ -1.02
PDGFRA-207ENST00000509092 PROB1E7EW31 1015 aa8.71□□□□□ -1.02
PDGFRA-207ENST00000509092 IGKV1D-16P01601 117 aa8.71□□□□□ -1.02
PDGFRA-207ENST00000509092 FREM3P0C091 2139 aa8.71□□□□□ -1.02
PDGFRA-207ENST00000509092 ACRP10323 421 aa8.71□□□□□ -1.02
PDGFRA-207ENST00000509092 HINT1P49773 126 aaPredicted RBP8.71□□□□□ -1.02
PDGFRA-207ENST00000509092 MNX1P50219 401 aaPredicted RBP8.71□□□□□ -1.02
PDGFRA-207ENST00000509092 CD226Q15762 336 aa8.71□□□□□ -1.02
PDGFRA-207ENST00000509092 MSMO1Q15800 293 aa8.71□□□□□ -1.02
PDGFRA-207ENST00000509092 POM121L1PQ3SYA9 428 aa8.71□□□□□ -1.02
PDGFRA-207ENST00000509092 ACSF3Q4G176 576 aaPredicted RBP8.71□□□□□ -1.02
PDGFRA-207ENST00000509092 ABCA11PQ4W5N1 156 aa8.71□□□□□ -1.02
PDGFRA-207ENST00000509092 PLPP4Q5VZY2 271 aa8.71□□□□□ -1.02
PDGFRA-207ENST00000509092 VWA1Q6PCB0 445 aa8.71□□□□□ -1.02
PDGFRA-207ENST00000509092 ZNF765Q7L2R6 523 aa8.71□□□□□ -1.02
PDGFRA-207ENST00000509092 C20orf196Q8IYI0 205 aa8.71□□□□□ -1.02
PDGFRA-207ENST00000509092 Q8N976 141 aa8.71□□□□□ -1.02
PDGFRA-207ENST00000509092 OR5L1Q8NGL2 311 aa8.71□□□□□ -1.02
PDGFRA-207ENST00000509092 RTN4IP1Q8WWV3 396 aaPredicted RBP8.71□□□□□ -1.02
PDGFRA-207ENST00000509092 HOXB13Q92826 284 aaPredicted RBP8.71□□□□□ -1.02
PDGFRA-207ENST00000509092 MSI2Q96DH6 328 aaKnown RBP8.71□□□□□ -1.02
PDGFRA-207ENST00000509092 TMEM56Q96MV1 263 aa8.71□□□□□ -1.02
PDGFRA-207ENST00000509092 ATP5SQ99766 215 aa8.71□□□□□ -1.02
PDGFRA-207ENST00000509092 OR10A2Q9H208 303 aa8.71□□□□□ -1.02
PDGFRA-207ENST00000509092 ZNF703Q9H7S9 590 aaPredicted RBP8.71□□□□□ -1.02
PDGFRA-207ENST00000509092 PATZ1Q9HBE1 687 aaKnown RBP8.71□□□□□ -1.02
PDGFRA-207ENST00000509092 SLC35D1Q9NTN3 355 aa8.71□□□□□ -1.02
PDGFRA-207ENST00000509092 CLN8Q9UBY8 286 aa8.71□□□□□ -1.02
PDGFRA-207ENST00000509092 TMEM56-RWDD3S4R434 201 aa8.71□□□□□ -1.02
PDGFRA-207ENST00000509092 IGHV1-69-2A0A0G2JMI3 117 aa8.7□□□□□ -1.02
PDGFRA-207ENST00000509092 CSTAP01040 98 aa8.7□□□□□ -1.02
PDGFRA-207ENST00000509092 VIPR2P41587 438 aa8.7□□□□□ -1.02
PDGFRA-207ENST00000509092 CDC34P49427 236 aaPredicted RBP8.7□□□□□ -1.02
PDGFRA-207ENST00000509092 RAB28P51157 221 aa8.7□□□□□ -1.02
PDGFRA-207ENST00000509092 LINC00310P59036 64 aa8.7□□□□□ -1.02
PDGFRA-207ENST00000509092 PRICKLE4Q2TBC4 344 aa8.7□□□□□ -1.02
PDGFRA-207ENST00000509092 PRR27Q6MZM9 219 aa8.7□□□□□ -1.02
PDGFRA-207ENST00000509092 CFAP161Q6P656 301 aa8.7□□□□□ -1.02
PDGFRA-207ENST00000509092 LCN15Q6UWW0 184 aa8.7□□□□□ -1.02
PDGFRA-207ENST00000509092 ABHD3Q8WU67 409 aa8.7□□□□□ -1.02
PDGFRA-207ENST00000509092 SLC46A1Q96NT5 459 aa8.7□□□□□ -1.02
PDGFRA-207ENST00000509092 TP53TG3Q9ULZ0 132 aa8.7□□□□□ -1.02
PDGFRA-207ENST00000509092 DIRC3C9JPN6 131 aa8.7□□□□□ -1.02
PDGFRA-207ENST00000509092 SLC16A7O60669 478 aa8.7□□□□□ -1.02
PDGFRA-207ENST00000509092 ONECUT2O95948 504 aa8.7□□□□□ -1.02
PDGFRA-207ENST00000509092 PDGFBP01127 241 aaPredicted RBP8.7□□□□□ -1.02
PDGFRA-207ENST00000509092 IFI6P09912 130 aa8.7□□□□□ -1.02
PDGFRA-207ENST00000509092 FAHP16930 419 aa8.7□□□□□ -1.02
PDGFRA-207ENST00000509092 ADMP35318 185 aa8.7□□□□□ -1.02
PDGFRA-207ENST00000509092 OR3A4PP47883 348 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms