RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 Q96MT0 163 aa10.02□□□□□ -0.81
PDPN-208ENST00000509009 MYCBPQ99417 103 aaPredicted RBP10.02□□□□□ -0.81
PDPN-208ENST00000509009 MMP28Q9H239 520 aa10.02□□□□□ -0.81
PDPN-208ENST00000509009 GAL3ST2Q9H3Q3 398 aa10.02□□□□□ -0.81
PDPN-208ENST00000509009 NEK6Q9HC98 313 aa10.02□□□□□ -0.81
PDPN-208ENST00000509009 ERVK13-1Q9NX77 482 aa10.02□□□□□ -0.81
PDPN-208ENST00000509009 PCDHGB5Q9Y5G0 923 aa10.02□□□□□ -0.81
PDPN-208ENST00000509009 ODAMA1E959 279 aa10.01□□□□□ -0.81
PDPN-208ENST00000509009 LEUTXA8MZ59 168 aa10.01□□□□□ -0.81
PDPN-208ENST00000509009 SLC33A1O00400 549 aaPredicted RBP10.01□□□□□ -0.81
PDPN-208ENST00000509009 FADS2O95864 444 aaKnown RBP10.01□□□□□ -0.81
PDPN-208ENST00000509009 CSN2P05814 226 aa10.01□□□□□ -0.81
PDPN-208ENST00000509009 RPSAP08865 295 aaKnown RBP10.01□□□□□ -0.81
PDPN-208ENST00000509009 CGB3P0DN86 165 aa10.01□□□□□ -0.81
PDPN-208ENST00000509009 CGB7P0DN87 165 aa10.01□□□□□ -0.81
PDPN-208ENST00000509009 ZNF44P15621 663 aa10.01□□□□□ -0.81
PDPN-208ENST00000509009 CD24P25063 80 aa10.01□□□□□ -0.81
PDPN-208ENST00000509009 CD34P28906 385 aa10.01□□□□□ -0.81
PDPN-208ENST00000509009 ZP1P60852 638 aa10.01□□□□□ -0.81
PDPN-208ENST00000509009 IL18R1Q13478 541 aa10.01□□□□□ -0.81
PDPN-208ENST00000509009 KRBOX4Q5JUW0 171 aa10.01□□□□□ -0.81
PDPN-208ENST00000509009 NDUFA11Q86Y39 141 aa10.01□□□□□ -0.81
PDPN-208ENST00000509009 C10orf67Q8IYJ2 551 aa10.01□□□□□ -0.81
PDPN-208ENST00000509009 PARP16Q8N5Y8 322 aa10.01□□□□□ -0.81
PDPN-208ENST00000509009 CHST4Q8NCG5 386 aa10.01□□□□□ -0.81
PDPN-208ENST00000509009 OR5AK2Q8NH90 309 aa10.01□□□□□ -0.81
PDPN-208ENST00000509009 ZNF596Q8TC21 504 aa10.01□□□□□ -0.81
PDPN-208ENST00000509009 STMN2Q93045 179 aa10.01□□□□□ -0.81
PDPN-208ENST00000509009 R3HDM4Q96D70 268 aa10.01□□□□□ -0.81
PDPN-208ENST00000509009 MRPS18AQ9NVS2 196 aaKnown RBP10.01□□□□□ -0.81
PDPN-208ENST00000509009 LOC100130705A0A1B0GUX0 176 aa10□□□□□ -0.81
PDPN-208ENST00000509009 FAM172BPA6NC97 362 aa10□□□□□ -0.81
PDPN-208ENST00000509009 TMEM212A6NML5 194 aa10□□□□□ -0.81
PDPN-208ENST00000509009 LY6LH3BQJ8 138 aa10□□□□□ -0.81
PDPN-208ENST00000509009 SULT1B1O43704 296 aa10□□□□□ -0.81
PDPN-208ENST00000509009 MPZL2O60487 215 aa10□□□□□ -0.81
PDPN-208ENST00000509009 PEX14O75381 377 aa10□□□□□ -0.81
PDPN-208ENST00000509009 HCKP08631 526 aa10□□□□□ -0.81
PDPN-208ENST00000509009 BRS3P32247 399 aa10□□□□□ -0.81
PDPN-208ENST00000509009 VDAC2P45880 294 aaPredicted RBP10□□□□□ -0.81
PDPN-208ENST00000509009 MTNR1BP49286 362 aa10□□□□□ -0.81
PDPN-208ENST00000509009 PRRX1P54821 245 aa10□□□□□ -0.81
PDPN-208ENST00000509009 CD83Q01151 205 aa10□□□□□ -0.81
PDPN-208ENST00000509009 RAB40BQ12829 278 aa10□□□□□ -0.81
PDPN-208ENST00000509009 C17orf58Q2M2W7 97 aa10□□□□□ -0.81
PDPN-208ENST00000509009 TMEM95Q3KNT9 176 aa10□□□□□ -0.81
PDPN-208ENST00000509009 OXLD1Q5BKU9 147 aa10□□□□□ -0.81
PDPN-208ENST00000509009 ARSJQ5FYB0 599 aaPredicted RBP10□□□□□ -0.81
PDPN-208ENST00000509009 UTF1Q5T230 341 aa10□□□□□ -0.81
PDPN-208ENST00000509009 ZNF691Q5VV52 312 aa10□□□□□ -0.81
PDPN-208ENST00000509009 ELP2Q6IA86 826 aa10□□□□□ -0.81
PDPN-208ENST00000509009 OR5AU1Q8NGC0 362 aa10□□□□□ -0.81
PDPN-208ENST00000509009 OR52I1Q8NGK6 324 aa10□□□□□ -0.81
PDPN-208ENST00000509009 PDCD1LG2Q9BQ51 273 aa10□□□□□ -0.81
PDPN-208ENST00000509009 C9orf16Q9BUW7 83 aa10□□□□□ -0.81
PDPN-208ENST00000509009 ZNF286AQ9HBT8 521 aa10□□□□□ -0.81
PDPN-208ENST00000509009 INPP5EQ9NRR6 644 aa10□□□□□ -0.81
PDPN-208ENST00000509009 FAM118AQ9NWS6 357 aa10□□□□□ -0.81
PDPN-208ENST00000509009 ING3Q9NXR8 418 aa10□□□□□ -0.81
PDPN-208ENST00000509009 A0A087X0M5 115 aa9.99□□□□□ -0.81
PDPN-208ENST00000509009 KBTBD11-OT1A0A1B0GTJ5 212 aa9.99□□□□□ -0.81
PDPN-208ENST00000509009 A0A1B0GX30 115 aa9.99□□□□□ -0.81
PDPN-208ENST00000509009 ZNF729A6NN14 1252 aaPredicted RBP9.99□□□□□ -0.81
PDPN-208ENST00000509009 BUB1B-PAK6H3BSN5 160 aa9.99□□□□□ -0.81
PDPN-208ENST00000509009 TOR1AO14656 332 aa9.99□□□□□ -0.81
PDPN-208ENST00000509009 XPNPEP2O43895 674 aa9.99□□□□□ -0.81
PDPN-208ENST00000509009 PRB2P02812 416 aaPredicted RBP9.99□□□□□ -0.81
PDPN-208ENST00000509009 ALDOBP05062 364 aa9.99□□□□□ -0.81
PDPN-208ENST00000509009 GTF2A1P52655 376 aaPredicted RBP9.99□□□□□ -0.81
PDPN-208ENST00000509009 GBX2P52951 348 aaPredicted RBP9.99□□□□□ -0.81
PDPN-208ENST00000509009 MRPL28Q13084 256 aaKnown RBP9.99□□□□□ -0.81
PDPN-208ENST00000509009 KLHL22Q53GT1 634 aa9.99□□□□□ -0.81
PDPN-208ENST00000509009 FBLN7Q53RD9 439 aa9.99□□□□□ -0.81
PDPN-208ENST00000509009 TPTE2P1Q5T6R2 138 aa9.99□□□□□ -0.81
PDPN-208ENST00000509009 ZNF529Q6P280 563 aa9.99□□□□□ -0.81
PDPN-208ENST00000509009 ASCL4Q6XD76 172 aa9.99□□□□□ -0.81
PDPN-208ENST00000509009 CCDC121Q6ZUS5 278 aa9.99□□□□□ -0.81
PDPN-208ENST00000509009 C16orf82Q7Z2V1 217 aa9.99□□□□□ -0.81
PDPN-208ENST00000509009 CENPVQ7Z7K6 275 aaPredicted RBP9.99□□□□□ -0.81
PDPN-208ENST00000509009 WFDC9Q8NEX5 89 aa9.99□□□□□ -0.81
PDPN-208ENST00000509009 PXT1Q8NFP0 134 aa9.99□□□□□ -0.81
PDPN-208ENST00000509009 OR4F17Q8NGA8 305 aa9.99□□□□□ -0.81
PDPN-208ENST00000509009 OR4D6Q8NGJ1 314 aa9.99□□□□□ -0.81
PDPN-208ENST00000509009 OR51T1Q8NGJ9 327 aa9.99□□□□□ -0.81
PDPN-208ENST00000509009 CREB3L1Q96BA8 519 aa9.99□□□□□ -0.81
PDPN-208ENST00000509009 OR4F4Q96R69 305 aa9.99□□□□□ -0.81
PDPN-208ENST00000509009 NR1H4Q96RI1 486 aaPredicted RBP9.99□□□□□ -0.81
PDPN-208ENST00000509009 PPIL3Q9H2H8 161 aaKnown RBP9.99□□□□□ -0.81
PDPN-208ENST00000509009 NCOR1P1Q9H4R4 102 aa9.99□□□□□ -0.81
PDPN-208ENST00000509009 LIN7BQ9HAP6 207 aa9.99□□□□□ -0.81
PDPN-208ENST00000509009 S100A14Q9HCY8 104 aa9.99□□□□□ -0.81
PDPN-208ENST00000509009 OR6C3Q9NZP0 311 aa9.99□□□□□ -0.81
PDPN-208ENST00000509009 DHDHQ9UQ10 334 aa9.99□□□□□ -0.81
PDPN-208ENST00000509009 RPL36Q9Y3U8 105 aaKnown RBP9.99□□□□□ -0.81
PDPN-208ENST00000509009 TRAV24A0A0B4J272 114 aa9.98□□□□□ -0.81
PDPN-208ENST00000509009 AMY1AP04745 511 aa9.98□□□□□ -0.81
PDPN-208ENST00000509009 AMY2AP04746 511 aa9.98□□□□□ -0.81
PDPN-208ENST00000509009 CCDC159P0C7I6 412 aa9.98□□□□□ -0.81
PDPN-208ENST00000509009 LIMS3P0CW19 117 aa9.98□□□□□ -0.81
PDPN-208ENST00000509009 LIMS4P0CW20 117 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms