RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 TMEM222Q9H0R3 208 aa11.59□□□□□ -0.55
SNCAIP-209ENST00000508017 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.59□□□□□ -0.55
SNCAIP-209ENST00000508017 WRBO00258 174 aa11.59□□□□□ -0.55
SNCAIP-209ENST00000508017 ADAM20O43506 726 aa11.59□□□□□ -0.55
SNCAIP-209ENST00000508017 SCAF4O95104 1147 aaKnown RBP11.59□□□□□ -0.55
SNCAIP-209ENST00000508017 LY86O95711 162 aa11.59□□□□□ -0.55
SNCAIP-209ENST00000508017 NRASP01111 189 aa11.59□□□□□ -0.55
SNCAIP-209ENST00000508017 PDZD11Q5EBL8 140 aa11.59□□□□□ -0.55
SNCAIP-209ENST00000508017 LHFPL2Q6ZUX7 228 aa11.59□□□□□ -0.55
SNCAIP-209ENST00000508017 P4HA3Q7Z4N8 544 aa11.59□□□□□ -0.55
SNCAIP-209ENST00000508017 TBC1D26Q86UD7 250 aa11.59□□□□□ -0.55
SNCAIP-209ENST00000508017 MAML2Q8IZL2 1156 aaPredicted RBP11.59□□□□□ -0.55
SNCAIP-209ENST00000508017 SMDT1Q9H4I9 107 aa11.59□□□□□ -0.55
SNCAIP-209ENST00000508017 ZNF442Q9H7R0 627 aa11.59□□□□□ -0.55
SNCAIP-209ENST00000508017 PLEKHF2Q9H8W4 249 aa11.59□□□□□ -0.55
SNCAIP-209ENST00000508017 KIAA1456Q9P272 454 aa11.59□□□□□ -0.55
SNCAIP-209ENST00000508017 FRYLO94915 3013 aa11.58□□□□□ -0.56
SNCAIP-209ENST00000508017 FREM2Q5SZK8 3169 aa11.58□□□□□ -0.56
SNCAIP-209ENST00000508017 HIST1H2BKO60814 126 aa11.58□□□□□ -0.56
SNCAIP-209ENST00000508017 PDCD6O75340 191 aa11.58□□□□□ -0.56
SNCAIP-209ENST00000508017 CDS2O95674 445 aa11.58□□□□□ -0.56
SNCAIP-209ENST00000508017 HIST1H2BJP06899 126 aa11.58□□□□□ -0.56
SNCAIP-209ENST00000508017 KLK3P07288 261 aaPredicted RBP11.58□□□□□ -0.56
SNCAIP-209ENST00000508017 HIST1H2BOP23527 126 aa11.58□□□□□ -0.56
SNCAIP-209ENST00000508017 S100A2P29034 98 aa11.58□□□□□ -0.56
SNCAIP-209ENST00000508017 HIST1H2BBP33778 126 aa11.58□□□□□ -0.56
SNCAIP-209ENST00000508017 NTF4P34130 210 aa11.58□□□□□ -0.56
SNCAIP-209ENST00000508017 HIST1H2BDP58876 126 aa11.58□□□□□ -0.56
SNCAIP-209ENST00000508017 HIST1H2BCP62807 126 aa11.58□□□□□ -0.56
SNCAIP-209ENST00000508017 HIST2H2BEQ16778 126 aa11.58□□□□□ -0.56
SNCAIP-209ENST00000508017 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.58□□□□□ -0.56
SNCAIP-209ENST00000508017 FAM27BQ5VT28 67 aa11.58□□□□□ -0.56
SNCAIP-209ENST00000508017 SP5Q6BEB4 398 aaPredicted RBP11.58□□□□□ -0.56
SNCAIP-209ENST00000508017 NAT6Q93015 286 aa11.58□□□□□ -0.56
SNCAIP-209ENST00000508017 HIST1H2BHQ93079 126 aa11.58□□□□□ -0.56
SNCAIP-209ENST00000508017 HIST1H2BNQ99877 126 aa11.58□□□□□ -0.56
SNCAIP-209ENST00000508017 HIST1H2BMQ99879 126 aa11.58□□□□□ -0.56
SNCAIP-209ENST00000508017 SLC7A10Q9NS82 523 aa11.58□□□□□ -0.56
SNCAIP-209ENST00000508017 LYRM2Q9NU23 88 aaPredicted RBP11.58□□□□□ -0.56
SNCAIP-209ENST00000508017 GAR1Q9NY12 217 aaKnown RBP11.58□□□□□ -0.56
SNCAIP-209ENST00000508017 WNT16Q9UBV4 365 aa11.58□□□□□ -0.56
SNCAIP-209ENST00000508017 UBE2J1Q9Y385 318 aaPredicted RBP11.58□□□□□ -0.56
SNCAIP-209ENST00000508017 TNFSF11O14788 317 aa11.58□□□□□ -0.56
SNCAIP-209ENST00000508017 HAAOP46952 286 aa11.58□□□□□ -0.56
SNCAIP-209ENST00000508017 NPBWR2P48146 333 aa11.58□□□□□ -0.56
SNCAIP-209ENST00000508017 MALLQ13021 153 aa11.58□□□□□ -0.56
SNCAIP-209ENST00000508017 RAB35Q15286 201 aa11.58□□□□□ -0.56
SNCAIP-209ENST00000508017 SPIN3Q5JUX0 258 aa11.58□□□□□ -0.56
SNCAIP-209ENST00000508017 CALHM1Q8IU99 346 aa11.58□□□□□ -0.56
SNCAIP-209ENST00000508017 ZNF695Q8IW36 515 aa11.58□□□□□ -0.56
SNCAIP-209ENST00000508017 ZNF100Q8IYN0 542 aa11.58□□□□□ -0.56
SNCAIP-209ENST00000508017 SELENOHQ8IZQ5 122 aaKnown RBP11.58□□□□□ -0.56
SNCAIP-209ENST00000508017 CCDC54Q8NEL0 328 aa11.58□□□□□ -0.56
SNCAIP-209ENST00000508017 OR10D4PQ8NGN7 298 aa11.58□□□□□ -0.56
SNCAIP-209ENST00000508017 OR1F12Q8NHA8 337 aa11.58□□□□□ -0.56
SNCAIP-209ENST00000508017 SRXN1Q9BYN0 137 aa11.58□□□□□ -0.56
SNCAIP-209ENST00000508017 PARPBPQ9NWS1 579 aa11.58□□□□□ -0.56
SNCAIP-209ENST00000508017 TREM2Q9NZC2 230 aa11.58□□□□□ -0.56
SNCAIP-209ENST00000508017 WSB1Q9Y6I7 421 aa11.58□□□□□ -0.56
SNCAIP-209ENST00000508017 A0A0J9YW62 118 aa11.57□□□□□ -0.56
SNCAIP-209ENST00000508017 CYB5BO43169 146 aa11.57□□□□□ -0.56
SNCAIP-209ENST00000508017 OR7C1O76099 320 aaPredicted RBP11.57□□□□□ -0.56
SNCAIP-209ENST00000508017 TRGC2P03986 189 aa11.57□□□□□ -0.56
SNCAIP-209ENST00000508017 SOD3P08294 240 aa11.57□□□□□ -0.56
SNCAIP-209ENST00000508017 CCL3P10147 92 aa11.57□□□□□ -0.56
SNCAIP-209ENST00000508017 TCN2P20062 427 aa11.57□□□□□ -0.56
SNCAIP-209ENST00000508017 VAMP2P63027 116 aa11.57□□□□□ -0.56
SNCAIP-209ENST00000508017 MRPS34P82930 218 aaKnown RBP11.57□□□□□ -0.56
SNCAIP-209ENST00000508017 ZNF154Q13106 437 aa11.57□□□□□ -0.56
SNCAIP-209ENST00000508017 ZNF468Q5VIY5 522 aaPredicted RBP11.57□□□□□ -0.56
SNCAIP-209ENST00000508017 ZNF385CQ66K41 422 aaPredicted RBP11.57□□□□□ -0.56
SNCAIP-209ENST00000508017 DPPA2Q7Z7J5 298 aa11.57□□□□□ -0.56
SNCAIP-209ENST00000508017 VPS13AQ96RL7 3174 aa11.57□□□□□ -0.56
SNCAIP-209ENST00000508017 A0A087WWC5 75 aa11.57□□□□□ -0.56
SNCAIP-209ENST00000508017 B4GALT1P15291 398 aa11.57□□□□□ -0.56
SNCAIP-209ENST00000508017 ZNF32P17041 273 aa11.57□□□□□ -0.56
SNCAIP-209ENST00000508017 GPX4P36969 197 aaPredicted RBP11.57□□□□□ -0.56
SNCAIP-209ENST00000508017 RBM11P57052 281 aaKnown RBP11.57□□□□□ -0.56
SNCAIP-209ENST00000508017 ZNF92Q03936 586 aa11.57□□□□□ -0.56
SNCAIP-209ENST00000508017 PLCXD3Q63HM9 321 aa11.57□□□□□ -0.56
SNCAIP-209ENST00000508017 TMEM42Q69YG0 159 aa11.57□□□□□ -0.56
SNCAIP-209ENST00000508017 ZNF818PQ6ZRF7 136 aa11.57□□□□□ -0.56
SNCAIP-209ENST00000508017 OR8G5Q8NG78 346 aa11.57□□□□□ -0.56
SNCAIP-209ENST00000508017 CLDND2Q8NHS1 167 aa11.57□□□□□ -0.56
SNCAIP-209ENST00000508017 FGFBP3Q8TAT2 258 aa11.57□□□□□ -0.56
SNCAIP-209ENST00000508017 PIGCQ92535 297 aa11.57□□□□□ -0.56
SNCAIP-209ENST00000508017 TVP23CQ96ET8 276 aa11.57□□□□□ -0.56
SNCAIP-209ENST00000508017 GPR61Q9BZJ8 451 aa11.57□□□□□ -0.56
SNCAIP-209ENST00000508017 UNKLQ9H9P5 680 aaKnown RBP11.57□□□□□ -0.56
SNCAIP-209ENST00000508017 CALHM2Q9HA72 323 aa11.57□□□□□ -0.56
SNCAIP-209ENST00000508017 CRLF2Q9HC73 371 aa11.57□□□□□ -0.56
SNCAIP-209ENST00000508017 CA14Q9ULX7 337 aa11.57□□□□□ -0.56
SNCAIP-209ENST00000508017 YKT6O15498 198 aa11.56□□□□□ -0.56
SNCAIP-209ENST00000508017 GDF9O60383 454 aa11.56□□□□□ -0.56
SNCAIP-209ENST00000508017 ZIC3O60481 467 aa11.56□□□□□ -0.56
SNCAIP-209ENST00000508017 ZNF506Q5JVG8 444 aa11.56□□□□□ -0.56
SNCAIP-209ENST00000508017 CADM4Q8NFZ8 388 aa11.56□□□□□ -0.56
SNCAIP-209ENST00000508017 PLPPR1Q8TBJ4 325 aa11.56□□□□□ -0.56
SNCAIP-209ENST00000508017 RHOVQ96L33 236 aa11.56□□□□□ -0.56
SNCAIP-209ENST00000508017 TMEM56Q96MV1 263 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms