RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 Q6P435 159 aa9.22□□□□□ -0.93
HMGCS1-204ENST00000507293 CCDC121Q6ZUS5 278 aa9.22□□□□□ -0.93
HMGCS1-204ENST00000507293 KCTD20Q7Z5Y7 419 aa9.22□□□□□ -0.93
HMGCS1-204ENST00000507293 CENPVQ7Z7K6 275 aaPredicted RBP9.22□□□□□ -0.93
HMGCS1-204ENST00000507293 TRUB1Q8WWH5 349 aaKnown RBP9.22□□□□□ -0.93
HMGCS1-204ENST00000507293 CORO2AQ92828 525 aa9.22□□□□□ -0.93
HMGCS1-204ENST00000507293 STMN2Q93045 179 aa9.22□□□□□ -0.93
HMGCS1-204ENST00000507293 PELI1Q96FA3 418 aa9.22□□□□□ -0.93
HMGCS1-204ENST00000507293 COQ2Q96H96 371 aa9.22□□□□□ -0.93
HMGCS1-204ENST00000507293 C4orf36Q96KX1 117 aa9.22□□□□□ -0.93
HMGCS1-204ENST00000507293 TCRBV4S1A1TA0A5B7 111 aa9.21□□□□□ -0.94
HMGCS1-204ENST00000507293 SH2D7A6NKC9 451 aaPredicted RBP9.21□□□□□ -0.94
HMGCS1-204ENST00000507293 OR4C45A6NMZ5 311 aa9.21□□□□□ -0.94
HMGCS1-204ENST00000507293 SLC33A1O00400 549 aaPredicted RBP9.21□□□□□ -0.94
HMGCS1-204ENST00000507293 TOR1AO14656 332 aa9.21□□□□□ -0.94
HMGCS1-204ENST00000507293 CIB2O75838 187 aa9.21□□□□□ -0.94
HMGCS1-204ENST00000507293 OR2F2O95006 317 aa9.21□□□□□ -0.94
HMGCS1-204ENST00000507293 ALX3O95076 343 aa9.21□□□□□ -0.94
HMGCS1-204ENST00000507293 MT-ND2P03891 347 aa9.21□□□□□ -0.94
HMGCS1-204ENST00000507293 CSN2P05814 226 aa9.21□□□□□ -0.94
HMGCS1-204ENST00000507293 CEACAM3P40198 252 aa9.21□□□□□ -0.94
HMGCS1-204ENST00000507293 ALKBH1Q13686 389 aaKnown RBP9.21□□□□□ -0.94
HMGCS1-204ENST00000507293 KPNB1Q14974 876 aaKnown RBP9.21□□□□□ -0.94
HMGCS1-204ENST00000507293 ATXN7L3Q14CW9 347 aaPredicted RBP9.21□□□□□ -0.94
HMGCS1-204ENST00000507293 HLA-DRB5Q30154 266 aa9.21□□□□□ -0.94
HMGCS1-204ENST00000507293 UTF1Q5T230 341 aa9.21□□□□□ -0.94
HMGCS1-204ENST00000507293 SAXO1Q8IYX7 474 aa9.21□□□□□ -0.94
HMGCS1-204ENST00000507293 ACBD7Q8N6N7 88 aa9.21□□□□□ -0.94
HMGCS1-204ENST00000507293 CHST4Q8NCG5 386 aa9.21□□□□□ -0.94
HMGCS1-204ENST00000507293 OR4D6Q8NGJ1 314 aa9.21□□□□□ -0.94
HMGCS1-204ENST00000507293 HRASLS5Q96KN8 279 aa9.21□□□□□ -0.94
HMGCS1-204ENST00000507293 RBM14Q96PK6 669 aaKnown RBP9.21□□□□□ -0.94
HMGCS1-204ENST00000507293 PPIL3Q9H2H8 161 aaKnown RBP9.21□□□□□ -0.94
HMGCS1-204ENST00000507293 ZCCHC4Q9H5U6 513 aa9.21□□□□□ -0.94
HMGCS1-204ENST00000507293 RHOFQ9HBH0 211 aa9.21□□□□□ -0.94
HMGCS1-204ENST00000507293 AASSQ9UDR5 926 aa9.21□□□□□ -0.94
HMGCS1-204ENST00000507293 A0A087X0M5 115 aa9.2□□□□□ -0.94
HMGCS1-204ENST00000507293 A0A1B0GX30 115 aa9.2□□□□□ -0.94
HMGCS1-204ENST00000507293 ZNF729A6NN14 1252 aaPredicted RBP9.2□□□□□ -0.94
HMGCS1-204ENST00000507293 BUB1B-PAK6H3BSN5 160 aa9.2□□□□□ -0.94
HMGCS1-204ENST00000507293 EI24O14681 340 aa9.2□□□□□ -0.94
HMGCS1-204ENST00000507293 DEGS1O15121 323 aa9.2□□□□□ -0.94
HMGCS1-204ENST00000507293 PF4P02776 101 aa9.2□□□□□ -0.94
HMGCS1-204ENST00000507293 AMY1AP04745 511 aa9.2□□□□□ -0.94
HMGCS1-204ENST00000507293 AMY2AP04746 511 aa9.2□□□□□ -0.94
HMGCS1-204ENST00000507293 ALPLP05186 524 aa9.2□□□□□ -0.94
HMGCS1-204ENST00000507293 HCKP08631 526 aa9.2□□□□□ -0.94
HMGCS1-204ENST00000507293 TMEM225BP0DP42 221 aa9.2□□□□□ -0.94
HMGCS1-204ENST00000507293 NFYBP25208 207 aa9.2□□□□□ -0.94
HMGCS1-204ENST00000507293 OR3A4PP47883 348 aa9.2□□□□□ -0.94
HMGCS1-204ENST00000507293 ZP1P60852 638 aa9.2□□□□□ -0.94
HMGCS1-204ENST00000507293 SNRPGP62308 76 aaKnown RBP9.2□□□□□ -0.94
HMGCS1-204ENST00000507293 RBM39Q14498 530 aaKnown RBP9.2□□□□□ -0.94
HMGCS1-204ENST00000507293 C17orf58Q2M2W7 97 aa9.2□□□□□ -0.94
HMGCS1-204ENST00000507293 ZIK1Q3SY52 487 aaPredicted RBP9.2□□□□□ -0.94
HMGCS1-204ENST00000507293 KHDC1LQ5JSQ8 128 aa9.2□□□□□ -0.94
HMGCS1-204ENST00000507293 SLC25A30Q5SVS4 291 aa9.2□□□□□ -0.94
HMGCS1-204ENST00000507293 MEDAGQ5VYS4 303 aa9.2□□□□□ -0.94
HMGCS1-204ENST00000507293 LPCAT4Q643R3 524 aa9.2□□□□□ -0.94
HMGCS1-204ENST00000507293 C10orf99Q6UWK7 81 aa9.2□□□□□ -0.94
HMGCS1-204ENST00000507293 WFDC9Q8NEX5 89 aa9.2□□□□□ -0.94
HMGCS1-204ENST00000507293 OR4X2Q8NGF9 303 aa9.2□□□□□ -0.94
HMGCS1-204ENST00000507293 PYDC1Q8WXC3 89 aa9.2□□□□□ -0.94
HMGCS1-204ENST00000507293 MYDGFQ969H8 173 aa9.2□□□□□ -0.94
HMGCS1-204ENST00000507293 CREB3L1Q96BA8 519 aa9.2□□□□□ -0.94
HMGCS1-204ENST00000507293 LGALS12Q96DT0 336 aa9.2□□□□□ -0.94
HMGCS1-204ENST00000507293 ALG8Q9BVK2 526 aa9.2□□□□□ -0.94
HMGCS1-204ENST00000507293 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.2□□□□□ -0.94
HMGCS1-204ENST00000507293 EXOGQ9Y2C4 368 aaKnown RBP9.2□□□□□ -0.94
HMGCS1-204ENST00000507293 MYRFQ9Y2G1 1151 aa9.2□□□□□ -0.94
HMGCS1-204ENST00000507293 ORC6Q9Y5N6 252 aa9.2□□□□□ -0.94
HMGCS1-204ENST00000507293 TSSC4Q9Y5U2 329 aaPredicted RBP9.2□□□□□ -0.94
HMGCS1-204ENST00000507293 E9PQ18 207 aa9.19□□□□□ -0.94
HMGCS1-204ENST00000507293 LY6LH3BQJ8 138 aa9.19□□□□□ -0.94
HMGCS1-204ENST00000507293 HSPB6O14558 160 aa9.19□□□□□ -0.94
HMGCS1-204ENST00000507293 SULT1B1O43704 296 aa9.19□□□□□ -0.94
HMGCS1-204ENST00000507293 MPIG6BO95866 241 aa9.19□□□□□ -0.94
HMGCS1-204ENST00000507293 DBTP11182 482 aaKnown RBP9.19□□□□□ -0.94
HMGCS1-204ENST00000507293 MNDAP41218 407 aa9.19□□□□□ -0.94
HMGCS1-204ENST00000507293 GLP1RP43220 463 aa9.19□□□□□ -0.94
HMGCS1-204ENST00000507293 PRRX1P54821 245 aa9.19□□□□□ -0.94
HMGCS1-204ENST00000507293 SLC35A2P78381 396 aa9.19□□□□□ -0.94
HMGCS1-204ENST00000507293 CDK5R1Q15078 307 aa9.19□□□□□ -0.94
HMGCS1-204ENST00000507293 KISS1Q15726 138 aa9.19□□□□□ -0.94
HMGCS1-204ENST00000507293 C9orf152Q5JTZ5 239 aa9.19□□□□□ -0.94
HMGCS1-204ENST00000507293 LHFPL3Q86UP9 236 aa9.19□□□□□ -0.94
HMGCS1-204ENST00000507293 MRPL48Q96GC5 212 aaKnown RBP9.19□□□□□ -0.94
HMGCS1-204ENST00000507293 KIRREL1Q96J84 757 aa9.19□□□□□ -0.94
HMGCS1-204ENST00000507293 ISG20L2Q9H9L3 353 aaKnown RBP9.19□□□□□ -0.94
HMGCS1-204ENST00000507293 OR6C3Q9NZP0 311 aa9.19□□□□□ -0.94
HMGCS1-204ENST00000507293 ZNF281Q9Y2X9 895 aa9.19□□□□□ -0.94
HMGCS1-204ENST00000507293 KBTBD11-OT1A0A1B0GTJ5 212 aa9.18□□□□□ -0.94
HMGCS1-204ENST00000507293 SNTNA6NMZ2 147 aa9.18□□□□□ -0.94
HMGCS1-204ENST00000507293 OOSP1A8MZH6 123 aa9.18□□□□□ -0.94
HMGCS1-204ENST00000507293 H0YJX3 145 aa9.18□□□□□ -0.94
HMGCS1-204ENST00000507293 EBAG9O00559 213 aa9.18□□□□□ -0.94
HMGCS1-204ENST00000507293 MTNR1BP49286 362 aa9.18□□□□□ -0.94
HMGCS1-204ENST00000507293 GALEQ14376 348 aa9.18□□□□□ -0.94
HMGCS1-204ENST00000507293 ZSCAN26Q16670 478 aa9.18□□□□□ -0.94
HMGCS1-204ENST00000507293 PAN3Q58A45 887 aaKnown RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms