RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 FAM90A2PQ658T7 463 aa15.37■□□□□ 0.05
NUP54-205ENST00000507257 ODF3L1Q8IXM7 274 aa15.37■□□□□ 0.05
NUP54-205ENST00000507257 LMX1AQ8TE12 382 aa15.37■□□□□ 0.05
NUP54-205ENST00000507257 MEGF10Q96KG7 1140 aa15.37■□□□□ 0.05
NUP54-205ENST00000507257 NOL4LQ96MY1 436 aaPredicted RBP15.37■□□□□ 0.05
NUP54-205ENST00000507257 SLC7A11Q9UPY5 501 aa15.37■□□□□ 0.05
NUP54-205ENST00000507257 MTCH2Q9Y6C9 303 aa15.37■□□□□ 0.05
NUP54-205ENST00000507257 PIAS3Q9Y6X2 628 aa15.37■□□□□ 0.05
NUP54-205ENST00000507257 A0A1W2PNR3 127 aa15.37■□□□□ 0.05
NUP54-205ENST00000507257 AADACP22760 399 aa15.37■□□□□ 0.05
NUP54-205ENST00000507257 ASCL1P50553 236 aa15.37■□□□□ 0.05
NUP54-205ENST00000507257 COA6Q5JTJ3 125 aaKnown RBP15.37■□□□□ 0.05
NUP54-205ENST00000507257 CMTM1Q8IZ96 169 aa15.37■□□□□ 0.05
NUP54-205ENST00000507257 BEND2Q8NDZ0 799 aa15.37■□□□□ 0.05
NUP54-205ENST00000507257 OR2M3Q8NG83 312 aa15.37■□□□□ 0.05
NUP54-205ENST00000507257 RAB24Q969Q5 203 aa15.37■□□□□ 0.05
NUP54-205ENST00000507257 P2RX4Q99571 388 aa15.37■□□□□ 0.05
NUP54-205ENST00000507257 ATP5SQ99766 215 aa15.37■□□□□ 0.05
NUP54-205ENST00000507257 GPR173Q9NS66 373 aa15.37■□□□□ 0.05
NUP54-205ENST00000507257 IGLV3-12A0A075B6K2 115 aa15.36■□□□□ 0.05
NUP54-205ENST00000507257 DFFBO76075 338 aa15.36■□□□□ 0.05
NUP54-205ENST00000507257 FGF7P21781 194 aa15.36■□□□□ 0.05
NUP54-205ENST00000507257 IL2RGP31785 369 aa15.36■□□□□ 0.05
NUP54-205ENST00000507257 SPCS3P61009 180 aa15.36■□□□□ 0.05
NUP54-205ENST00000507257 NMSQ5H8A3 153 aa15.36■□□□□ 0.05
NUP54-205ENST00000507257 TMEM183AQ8IXX5 376 aa15.36■□□□□ 0.05
NUP54-205ENST00000507257 SELENOHQ8IZQ5 122 aaKnown RBP15.36■□□□□ 0.05
NUP54-205ENST00000507257 IL22RA1Q8N6P7 574 aa15.36■□□□□ 0.05
NUP54-205ENST00000507257 IL22RA2Q969J5 263 aa15.36■□□□□ 0.05
NUP54-205ENST00000507257 SIGLEC12Q96PQ1 595 aa15.36■□□□□ 0.05
NUP54-205ENST00000507257 ACTR3CQ9C0K3 210 aaPredicted RBP15.36■□□□□ 0.05
NUP54-205ENST00000507257 SMOC1Q9H4F8 434 aa15.36■□□□□ 0.05
NUP54-205ENST00000507257 RFNGQ9Y644 331 aa15.36■□□□□ 0.05
NUP54-205ENST00000507257 DNAH14Q0VDD8 3507 aa15.36■□□□□ 0.05
NUP54-205ENST00000507257 PDCD6O75340 191 aa15.35■□□□□ 0.05
NUP54-205ENST00000507257 CLDN17P56750 224 aa15.35■□□□□ 0.05
NUP54-205ENST00000507257 TMEM42Q69YG0 159 aa15.35■□□□□ 0.05
NUP54-205ENST00000507257 MEX3BQ6ZN04 569 aaKnown RBP15.35■□□□□ 0.05
NUP54-205ENST00000507257 ANKRD37Q7Z713 158 aa15.35■□□□□ 0.05
NUP54-205ENST00000507257 ZNF695Q8IW36 515 aa15.35■□□□□ 0.05
NUP54-205ENST00000507257 OSR2Q8N2R0 312 aa15.35■□□□□ 0.05
NUP54-205ENST00000507257 CERS4Q9HA82 394 aa15.35■□□□□ 0.05
NUP54-205ENST00000507257 IGKV1-27A0A075B6S5 117 aa15.35■□□□□ 0.05
NUP54-205ENST00000507257 PIGBOS1A0A0B4J2F0 54 aa15.35■□□□□ 0.05
NUP54-205ENST00000507257 ANGPTL7O43827 346 aa15.35■□□□□ 0.05
NUP54-205ENST00000507257 SSSCA1O60232 199 aa15.35■□□□□ 0.05
NUP54-205ENST00000507257 PIAS2O75928 621 aa15.35■□□□□ 0.05
NUP54-205ENST00000507257 NPBWR2P48146 333 aa15.35■□□□□ 0.05
NUP54-205ENST00000507257 VEGFBP49765 207 aa15.35■□□□□ 0.05
NUP54-205ENST00000507257 CEBPGP53567 150 aa15.35■□□□□ 0.05
NUP54-205ENST00000507257 PMS2P11Q13670 270 aa15.35■□□□□ 0.05
NUP54-205ENST00000507257 WDR5BQ86VZ2 330 aa15.35■□□□□ 0.05
NUP54-205ENST00000507257 KMT5CQ86Y97 462 aa15.35■□□□□ 0.05
NUP54-205ENST00000507257 CALHM2Q9HA72 323 aa15.35■□□□□ 0.05
NUP54-205ENST00000507257 ZNF391Q9UJN7 358 aa15.35■□□□□ 0.05
NUP54-205ENST00000507257 RNF150Q9ULK6 438 aa15.35■□□□□ 0.05
NUP54-205ENST00000507257 IGHV3-20A0A0C4DH32 117 aa15.34■□□□□ 0.05
NUP54-205ENST00000507257 BCL2P10415 239 aa15.34■□□□□ 0.05
NUP54-205ENST00000507257 VDAC1P21796 283 aa15.34■□□□□ 0.05
NUP54-205ENST00000507257 CRYGSP22914 178 aa15.34■□□□□ 0.05
NUP54-205ENST00000507257 UCP1P25874 307 aa15.34■□□□□ 0.05
NUP54-205ENST00000507257 MALLQ13021 153 aa15.34■□□□□ 0.05
NUP54-205ENST00000507257 RNPS1Q15287 305 aaKnown RBP15.34■□□□□ 0.05
NUP54-205ENST00000507257 C1orf189Q5VU69 101 aa15.34■□□□□ 0.05
NUP54-205ENST00000507257 ABLIM2Q6H8Q1 611 aa15.34■□□□□ 0.05
NUP54-205ENST00000507257 PLXDC1Q8IUK5 500 aa15.34■□□□□ 0.05
NUP54-205ENST00000507257 FADS6Q8N9I5 356 aa15.34■□□□□ 0.05
NUP54-205ENST00000507257 MBD3L1Q8WWY6 194 aa15.34■□□□□ 0.05
NUP54-205ENST00000507257 PYGO2Q9BRQ0 406 aa15.34■□□□□ 0.05
NUP54-205ENST00000507257 SDF2L1Q9HCN8 221 aa15.34■□□□□ 0.05
NUP54-205ENST00000507257 UBE2J1Q9Y385 318 aaPredicted RBP15.34■□□□□ 0.05
NUP54-205ENST00000507257 SHANK1Q9Y566 2161 aa15.34■□□□□ 0.05
NUP54-205ENST00000507257 A8MWP6 167 aa15.33■□□□□ 0.05
NUP54-205ENST00000507257 LMO7DNF2Z398 122 aa15.33■□□□□ 0.05
NUP54-205ENST00000507257 LINC01565O15544 149 aa15.33■□□□□ 0.05
NUP54-205ENST00000507257 SPRY1O43609 319 aaPredicted RBP15.33■□□□□ 0.05
NUP54-205ENST00000507257 ONECUT2O95948 504 aa15.33■□□□□ 0.05
NUP54-205ENST00000507257 GLI4P10075 376 aa15.33■□□□□ 0.05
NUP54-205ENST00000507257 EPHA1P21709 976 aa15.33■□□□□ 0.05
NUP54-205ENST00000507257 GNRHRP30968 328 aa15.33■□□□□ 0.05
NUP54-205ENST00000507257 CHAF1BQ13112 559 aa15.33■□□□□ 0.05
NUP54-205ENST00000507257 SSX2Q16385 188 aa15.33■□□□□ 0.05
NUP54-205ENST00000507257 SNAI3Q3KNW1 292 aa15.33■□□□□ 0.05
NUP54-205ENST00000507257 BORCS8Q96FH0 119 aa15.33■□□□□ 0.05
NUP54-205ENST00000507257 SRD5A3Q9H8P0 318 aa15.33■□□□□ 0.05
NUP54-205ENST00000507257 DHHO43323 396 aa15.33■□□□□ 0.04
NUP54-205ENST00000507257 VAMP5O95183 116 aa15.33■□□□□ 0.04
NUP54-205ENST00000507257 ZNF205O95201 554 aa15.33■□□□□ 0.04
NUP54-205ENST00000507257 TCN2P20062 427 aa15.33■□□□□ 0.04
NUP54-205ENST00000507257 OMGP23515 440 aa15.33■□□□□ 0.04
NUP54-205ENST00000507257 ZFP36L1Q07352 338 aaKnown RBP15.33■□□□□ 0.04
NUP54-205ENST00000507257 PDZD11Q5EBL8 140 aa15.33■□□□□ 0.04
NUP54-205ENST00000507257 CXorf66Q5JRM2 361 aaPredicted RBP15.33■□□□□ 0.04
NUP54-205ENST00000507257 BEND4Q6ZU67 534 aa15.33■□□□□ 0.04
NUP54-205ENST00000507257 TBC1D26Q86UD7 250 aa15.33■□□□□ 0.04
NUP54-205ENST00000507257 PLPPR1Q8TBJ4 325 aa15.33■□□□□ 0.04
NUP54-205ENST00000507257 ZNF501Q96CX3 271 aaPredicted RBP15.33■□□□□ 0.04
NUP54-205ENST00000507257 SSX3Q99909 188 aa15.33■□□□□ 0.04
NUP54-205ENST00000507257 METTL7AQ9H8H3 244 aa15.33■□□□□ 0.04
NUP54-205ENST00000507257 ZNF581Q9P0T4 197 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms