RNA–Protein interactions for RNA: ENST00000504627.1

SQSTM1-209, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-209ENST00000504627 PTX4Q96A99 478 aa14.89□□□□□ -0.03
SQSTM1-209ENST00000504627 RFT1Q96AA3 541 aa14.89□□□□□ -0.03
SQSTM1-209ENST00000504627 RNF170Q96K19 258 aa14.89□□□□□ -0.03
SQSTM1-209ENST00000504627 HMG20AQ9NP66 347 aa14.89□□□□□ -0.03
SQSTM1-209ENST00000504627 TMEM272A0A1B0GTI8 110 aa14.88□□□□□ -0.03
SQSTM1-209ENST00000504627 ZNF732B4DXR9 585 aa14.88□□□□□ -0.03
SQSTM1-209ENST00000504627 CLDN34H7C241 214 aa14.88□□□□□ -0.03
SQSTM1-209ENST00000504627 ECDO95905 644 aaPredicted RBP14.88□□□□□ -0.03
SQSTM1-209ENST00000504627 SFTPBP07988 381 aa14.88□□□□□ -0.03
SQSTM1-209ENST00000504627 MUC1P15941 1255 aaPredicted RBP14.88□□□□□ -0.03
SQSTM1-209ENST00000504627 RAB6AP20340 208 aa14.88□□□□□ -0.03
SQSTM1-209ENST00000504627 DEFB112Q30KQ8 113 aa14.88□□□□□ -0.03
SQSTM1-209ENST00000504627 SPANXN2Q5MJ10 180 aa14.88□□□□□ -0.03
SQSTM1-209ENST00000504627 GLIPR1L1Q6UWM5 242 aa14.88□□□□□ -0.03
SQSTM1-209ENST00000504627 WDR82Q6UXN9 313 aa14.88□□□□□ -0.03
SQSTM1-209ENST00000504627 BTN2A1Q7KYR7 527 aa14.88□□□□□ -0.03
SQSTM1-209ENST00000504627 RNF144BQ7Z419 303 aa14.88□□□□□ -0.03
SQSTM1-209ENST00000504627 ANGPTL5Q86XS5 388 aa14.88□□□□□ -0.03
SQSTM1-209ENST00000504627 SAXO1Q8IYX7 474 aa14.88□□□□□ -0.03
SQSTM1-209ENST00000504627 OR5D18Q8NGL1 313 aa14.88□□□□□ -0.03
SQSTM1-209ENST00000504627 SLC25A38Q96DW6 304 aa14.88□□□□□ -0.03
SQSTM1-209ENST00000504627 CCL13Q99616 98 aa14.88□□□□□ -0.03
SQSTM1-209ENST00000504627 PKIBQ9C010 78 aa14.88□□□□□ -0.03
SQSTM1-209ENST00000504627 WDR12Q9GZL7 423 aaKnown RBP14.88□□□□□ -0.03
SQSTM1-209ENST00000504627 CST11Q9H112 138 aa14.88□□□□□ -0.03
SQSTM1-209ENST00000504627 RHBDL2Q9NX52 303 aa14.88□□□□□ -0.03
SQSTM1-209ENST00000504627 IL36GQ9NZH8 169 aa14.88□□□□□ -0.03
SQSTM1-209ENST00000504627 KAAG1Q9UBP8 84 aa14.88□□□□□ -0.03
SQSTM1-209ENST00000504627 TMEM14DPA8MWL7 114 aa14.87□□□□□ -0.03
SQSTM1-209ENST00000504627 J3QT63 122 aa14.87□□□□□ -0.03
SQSTM1-209ENST00000504627 HOXA3O43365 443 aaPredicted RBP14.87□□□□□ -0.03
SQSTM1-209ENST00000504627 ZNF780AO75290 641 aaPredicted RBP14.87□□□□□ -0.03
SQSTM1-209ENST00000504627 EIF4EP06730 217 aaKnown RBP14.87□□□□□ -0.03
SQSTM1-209ENST00000504627 MPZP25189 248 aa14.87□□□□□ -0.03
SQSTM1-209ENST00000504627 TNFSF8P32971 234 aa14.87□□□□□ -0.03
SQSTM1-209ENST00000504627 TALDO1P37837 337 aa14.87□□□□□ -0.03
SQSTM1-209ENST00000504627 GMFBP60983 142 aa14.87□□□□□ -0.03
SQSTM1-209ENST00000504627 ARF6P62330 175 aa14.87□□□□□ -0.03
SQSTM1-209ENST00000504627 PDZK1IP1Q13113 114 aa14.87□□□□□ -0.03
SQSTM1-209ENST00000504627 C2orf76Q3KRA6 126 aa14.87□□□□□ -0.03
SQSTM1-209ENST00000504627 FAM76BQ5HYJ3 339 aa14.87□□□□□ -0.03
SQSTM1-209ENST00000504627 RUSC1-AS1Q66K80 236 aa14.87□□□□□ -0.03
SQSTM1-209ENST00000504627 ASCL4Q6XD76 172 aa14.87□□□□□ -0.03
SQSTM1-209ENST00000504627 SLC36A1Q7Z2H8 476 aa14.87□□□□□ -0.03
SQSTM1-209ENST00000504627 MFSD4AQ8N468 514 aa14.87□□□□□ -0.03
SQSTM1-209ENST00000504627 S100A13Q99584 98 aa14.87□□□□□ -0.03
SQSTM1-209ENST00000504627 ABCG5Q9H222 651 aa14.87□□□□□ -0.03
SQSTM1-209ENST00000504627 DNAJB11Q9UBS4 358 aa14.87□□□□□ -0.03
SQSTM1-209ENST00000504627 FAM25AB3EWG3 89 aa14.86□□□□□ -0.03
SQSTM1-209ENST00000504627 FAM25CB3EWG5 89 aa14.86□□□□□ -0.03
SQSTM1-209ENST00000504627 FAM25GB3EWG6 89 aa14.86□□□□□ -0.03
SQSTM1-209ENST00000504627 ELK1P19419 428 aa14.86□□□□□ -0.03
SQSTM1-209ENST00000504627 HAAOP46952 286 aa14.86□□□□□ -0.03
SQSTM1-209ENST00000504627 QRFPP83859 136 aa14.86□□□□□ -0.03
SQSTM1-209ENST00000504627 ZNF45Q02386 682 aa14.86□□□□□ -0.03
SQSTM1-209ENST00000504627 GPR176Q14439 515 aa14.86□□□□□ -0.03
SQSTM1-209ENST00000504627 PDCD1Q15116 288 aa14.86□□□□□ -0.03
SQSTM1-209ENST00000504627 FAM189A2Q15884 450 aa14.86□□□□□ -0.03
SQSTM1-209ENST00000504627 C11orf91Q3C1V1 193 aa14.86□□□□□ -0.03
SQSTM1-209ENST00000504627 C16orf87Q6PH81 154 aa14.86□□□□□ -0.03
SQSTM1-209ENST00000504627 CNIH2Q6PI25 160 aa14.86□□□□□ -0.03
SQSTM1-209ENST00000504627 METAP1DQ6UB28 335 aaPredicted RBP14.86□□□□□ -0.03
SQSTM1-209ENST00000504627 SHISA2Q6UWI4 295 aa14.86□□□□□ -0.03
SQSTM1-209ENST00000504627 BAIAP2L2Q6UXY1 529 aa14.86□□□□□ -0.03
SQSTM1-209ENST00000504627 CALHM1Q8IU99 346 aa14.86□□□□□ -0.03
SQSTM1-209ENST00000504627 KCNG3Q8TAE7 436 aa14.86□□□□□ -0.03
SQSTM1-209ENST00000504627 DIRAS2Q96HU8 199 aa14.86□□□□□ -0.03
SQSTM1-209ENST00000504627 TBX15Q96SF7 602 aa14.86□□□□□ -0.03
SQSTM1-209ENST00000504627 ZNF747Q9BV97 191 aa14.86□□□□□ -0.03
SQSTM1-209ENST00000504627 OR51I2Q9H344 312 aa14.86□□□□□ -0.03
SQSTM1-209ENST00000504627 TNFRSF19Q9NS68 423 aa14.86□□□□□ -0.03
SQSTM1-209ENST00000504627 CENPVL3A0A0U1RRI6 287 aa14.85□□□□□ -0.03
SQSTM1-209ENST00000504627 SPRY1O43609 319 aaPredicted RBP14.85□□□□□ -0.03
SQSTM1-209ENST00000504627 SCGNO76038 276 aa14.85□□□□□ -0.03
SQSTM1-209ENST00000504627 CYB5AP00167 134 aa14.85□□□□□ -0.03
SQSTM1-209ENST00000504627 TMEM225BP0DP42 221 aa14.85□□□□□ -0.03
SQSTM1-209ENST00000504627 VSIG8P0DPA2 414 aa14.85□□□□□ -0.03
SQSTM1-209ENST00000504627 MMP9P14780 707 aa14.85□□□□□ -0.03
SQSTM1-209ENST00000504627 IL13RA1P78552 427 aa14.85□□□□□ -0.03
SQSTM1-209ENST00000504627 IL24Q13007 206 aa14.85□□□□□ -0.03
SQSTM1-209ENST00000504627 UNC119Q13432 240 aa14.85□□□□□ -0.03
SQSTM1-209ENST00000504627 ZNF846Q147U1 533 aa14.85□□□□□ -0.03
SQSTM1-209ENST00000504627 SLC22A6Q4U2R8 563 aa14.85□□□□□ -0.03
SQSTM1-209ENST00000504627 HAGHLQ6PII5 290 aaPredicted RBP14.85□□□□□ -0.03
SQSTM1-209ENST00000504627 LHX4Q969G2 390 aa14.85□□□□□ -0.03
SQSTM1-209ENST00000504627 SEH1LQ96EE3 360 aa14.85□□□□□ -0.03
SQSTM1-209ENST00000504627 TMEM59Q9BXS4 323 aa14.85□□□□□ -0.03
SQSTM1-209ENST00000504627 METTL9Q9H1A3 318 aa14.85□□□□□ -0.03
SQSTM1-209ENST00000504627 TLNRD1Q9H1K6 362 aa14.85□□□□□ -0.03
SQSTM1-209ENST00000504627 KCNK15Q9H427 330 aa14.85□□□□□ -0.03
SQSTM1-209ENST00000504627 PCDHB16Q9NRJ7 776 aa14.85□□□□□ -0.03
SQSTM1-209ENST00000504627 RABL2AQ9UBK7 228 aaPredicted RBP14.85□□□□□ -0.03
SQSTM1-209ENST00000504627 EXTL2Q9UBQ6 330 aa14.85□□□□□ -0.03
SQSTM1-209ENST00000504627 RAB22AQ9UL26 194 aa14.85□□□□□ -0.03
SQSTM1-209ENST00000504627 RABL2BQ9UNT1 228 aa14.85□□□□□ -0.03
SQSTM1-209ENST00000504627 POLDIP2Q9Y2S7 368 aa14.85□□□□□ -0.03
SQSTM1-209ENST00000504627 V9GYH0 126 aa14.85□□□□□ -0.03
SQSTM1-209ENST00000504627 A0A0A6YYH2 397 aa14.84□□□□□ -0.03
SQSTM1-209ENST00000504627 A0A1B0GW55 424 aa14.84□□□□□ -0.03
SQSTM1-209ENST00000504627 A6NJ64 397 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms