RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 CXCL16Q9H2A7 254 aa0.91□□□□□ -2.26
SMC4-227ENST00000497984 POMKQ9H5K3 350 aa0.91□□□□□ -2.26
SMC4-227ENST00000497984 PLEKHA1Q9HB21 404 aa0.91□□□□□ -2.26
SMC4-227ENST00000497984 CRLF2Q9HC73 371 aa0.91□□□□□ -2.26
SMC4-227ENST00000497984 LZTFL1Q9NQ48 299 aa0.91□□□□□ -2.26
SMC4-227ENST00000497984 RPRD1BQ9NQG5 326 aaKnown RBP0.91□□□□□ -2.26
SMC4-227ENST00000497984 SDHAF3Q9NRP4 125 aa0.91□□□□□ -2.26
SMC4-227ENST00000497984 RABL2AQ9UBK7 228 aaPredicted RBP0.91□□□□□ -2.26
SMC4-227ENST00000497984 PLXNB3Q9ULL4 1909 aa0.91□□□□□ -2.26
SMC4-227ENST00000497984 TRBV24-1A0A075B6N3 115 aa0.9□□□□□ -2.27
SMC4-227ENST00000497984 A0A1W2PPV4 95 aa0.9□□□□□ -2.27
SMC4-227ENST00000497984 C19orf71A6NCJ1 209 aa0.9□□□□□ -2.27
SMC4-227ENST00000497984 RBFOX3A6NFN3 312 aa0.9□□□□□ -2.27
SMC4-227ENST00000497984 KNCNA6PVL3 124 aa0.9□□□□□ -2.27
SMC4-227ENST00000497984 ZNF593O00488 134 aaPredicted RBP0.9□□□□□ -2.27
SMC4-227ENST00000497984 GATCO43716 136 aaKnown RBP0.9□□□□□ -2.27
SMC4-227ENST00000497984 KDELR3O43731 214 aa0.9□□□□□ -2.27
SMC4-227ENST00000497984 MBP02144 154 aa0.9□□□□□ -2.27
SMC4-227ENST00000497984 SOD3P08294 240 aa0.9□□□□□ -2.27
SMC4-227ENST00000497984 GABRA1P14867 456 aa0.9□□□□□ -2.27
SMC4-227ENST00000497984 GPR4P46093 362 aa0.9□□□□□ -2.27
SMC4-227ENST00000497984 FOXF1Q12946 379 aa0.9□□□□□ -2.27
SMC4-227ENST00000497984 PRDX4Q13162 271 aa0.9□□□□□ -2.27
SMC4-227ENST00000497984 CASP8Q14790 479 aa0.9□□□□□ -2.27
SMC4-227ENST00000497984 TMEM176BQ3YBM2 270 aaPredicted RBP0.9□□□□□ -2.27
SMC4-227ENST00000497984 ACTBL2Q562R1 376 aa0.9□□□□□ -2.27
SMC4-227ENST00000497984 UBE2NLQ5JXB2 153 aa0.9□□□□□ -2.27
SMC4-227ENST00000497984 ERICH5Q6P6B1 374 aa0.9□□□□□ -2.27
SMC4-227ENST00000497984 UGT2A3Q6UWM9 527 aa0.9□□□□□ -2.27
SMC4-227ENST00000497984 RBM45Q8IUH3 476 aaKnown RBP0.9□□□□□ -2.27
SMC4-227ENST00000497984 DEFB119Q8N690 84 aa0.9□□□□□ -2.27
SMC4-227ENST00000497984 OR6K3Q8NGY3 331 aa0.9□□□□□ -2.27
SMC4-227ENST00000497984 LMX1AQ8TE12 382 aa0.9□□□□□ -2.27
SMC4-227ENST00000497984 FAM131CQ96AQ9 280 aa0.9□□□□□ -2.27
SMC4-227ENST00000497984 ADTRPQ96IZ2 230 aa0.9□□□□□ -2.27
SMC4-227ENST00000497984 UTP23Q9BRU9 249 aaKnown RBP0.9□□□□□ -2.27
SMC4-227ENST00000497984 TSSK6Q9BXA6 273 aa0.9□□□□□ -2.27
SMC4-227ENST00000497984 BEX2Q9BXY8 128 aa0.9□□□□□ -2.27
SMC4-227ENST00000497984 OR2D2Q9H210 308 aa0.9□□□□□ -2.27
SMC4-227ENST00000497984 PRORYQ9H606 182 aa0.9□□□□□ -2.27
SMC4-227ENST00000497984 WDR55Q9H6Y2 383 aaPredicted RBP0.9□□□□□ -2.27
SMC4-227ENST00000497984 ACOT13Q9NPJ3 140 aa0.9□□□□□ -2.27
SMC4-227ENST00000497984 IFNKQ9P0W0 207 aa0.9□□□□□ -2.27
SMC4-227ENST00000497984 CYB5R1Q9UHQ9 305 aa0.9□□□□□ -2.27
SMC4-227ENST00000497984 CCL26Q9Y258 94 aa0.9□□□□□ -2.27
SMC4-227ENST00000497984 V9GYY9 64 aa0.9□□□□□ -2.27
SMC4-227ENST00000497984 SETD1AO15047 1707 aaKnown RBP0.89□□□□□ -2.27
SMC4-227ENST00000497984 GPR98Q8WXG9 6306 aa0.89□□□□□ -2.27
SMC4-227ENST00000497984 A0A1B0GTI1 187 aa0.89□□□□□ -2.27
SMC4-227ENST00000497984 TP53I11O14683 189 aa0.89□□□□□ -2.27
SMC4-227ENST00000497984 GPR75O95800 540 aa0.89□□□□□ -2.27
SMC4-227ENST00000497984 SNAI1O95863 264 aaPredicted RBP0.89□□□□□ -2.27
SMC4-227ENST00000497984 CD8AP01732 235 aa0.89□□□□□ -2.27
SMC4-227ENST00000497984 PRKACAP17612 351 aa0.89□□□□□ -2.27
SMC4-227ENST00000497984 PSMB9P28065 219 aa0.89□□□□□ -2.27
SMC4-227ENST00000497984 ZNF140P52738 457 aaPredicted RBP0.89□□□□□ -2.27
SMC4-227ENST00000497984 NOXRED1Q6NXP6 359 aa0.89□□□□□ -2.27
SMC4-227ENST00000497984 Q6ZRU5 148 aa0.89□□□□□ -2.27
SMC4-227ENST00000497984 Q6ZSA8 131 aa0.89□□□□□ -2.27
SMC4-227ENST00000497984 TCF23Q7RTU1 214 aa0.89□□□□□ -2.27
SMC4-227ENST00000497984 FAM19A1Q7Z5A9 133 aa0.89□□□□□ -2.27
SMC4-227ENST00000497984 OR52K1Q8NGK4 314 aa0.89□□□□□ -2.27
SMC4-227ENST00000497984 LINC01587Q99440 93 aa0.89□□□□□ -2.27
SMC4-227ENST00000497984 B9D2Q9BPU9 175 aa0.89□□□□□ -2.27
SMC4-227ENST00000497984 ANAPC13Q9BS18 74 aa0.89□□□□□ -2.27
SMC4-227ENST00000497984 MAP1LC3CQ9BXW4 147 aa0.89□□□□□ -2.27
SMC4-227ENST00000497984 ULBP1Q9BZM6 244 aa0.89□□□□□ -2.27
SMC4-227ENST00000497984 MFSD1Q9H3U5 465 aa0.89□□□□□ -2.27
SMC4-227ENST00000497984 NCOR1P1Q9H4R4 102 aa0.89□□□□□ -2.27
SMC4-227ENST00000497984 PSORS1C2Q9UIG4 136 aa0.89□□□□□ -2.27
SMC4-227ENST00000497984 VPREB3Q9UKI3 123 aa0.89□□□□□ -2.27
SMC4-227ENST00000497984 C14orf166Q9Y224 244 aaKnown RBP0.89□□□□□ -2.27
SMC4-227ENST00000497984 HSPE1-MOB4S4R3N1 261 aa0.89□□□□□ -2.27
SMC4-227ENST00000497984 ADGRB3O60242 1522 aa0.89□□□□□ -2.27
SMC4-227ENST00000497984 PLXNA3P51805 1871 aa0.88□□□□□ -2.27
SMC4-227ENST00000497984 C17orf98A8MV24 154 aa0.88□□□□□ -2.27
SMC4-227ENST00000497984 MYO1DO94832 1006 aa0.88□□□□□ -2.27
SMC4-227ENST00000497984 IGKV5-2P06315 115 aa0.88□□□□□ -2.27
SMC4-227ENST00000497984 CRYGCP07315 174 aa0.88□□□□□ -2.27
SMC4-227ENST00000497984 CECR9P0C854 216 aa0.88□□□□□ -2.27
SMC4-227ENST00000497984 SCGB1C2P0DMR2 95 aa0.88□□□□□ -2.27
SMC4-227ENST00000497984 PRTN3P24158 256 aa0.88□□□□□ -2.27
SMC4-227ENST00000497984 S100A2P29034 98 aa0.88□□□□□ -2.27
SMC4-227ENST00000497984 BLVRBP30043 206 aaPredicted RBP0.88□□□□□ -2.27
SMC4-227ENST00000497984 ATP5J2P56134 94 aa0.88□□□□□ -2.27
SMC4-227ENST00000497984 BNIP2Q12982 314 aa0.88□□□□□ -2.27
SMC4-227ENST00000497984 GUSBP1Q15486 140 aa0.88□□□□□ -2.27
SMC4-227ENST00000497984 ACSBG2Q5FVE4 666 aa0.88□□□□□ -2.27
SMC4-227ENST00000497984 LAIR2Q6ISS4 152 aa0.88□□□□□ -2.27
SMC4-227ENST00000497984 SCXQ7RTU7 201 aa0.88□□□□□ -2.27
SMC4-227ENST00000497984 CYP4Z1Q86W10 505 aa0.88□□□□□ -2.27
SMC4-227ENST00000497984 ZNF321PQ8N8H1 164 aa0.88□□□□□ -2.27
SMC4-227ENST00000497984 CLHC1Q8NHS4 586 aa0.88□□□□□ -2.27
SMC4-227ENST00000497984 SCGB1C1Q8TD33 95 aa0.88□□□□□ -2.27
SMC4-227ENST00000497984 BLNKQ8WV28 456 aa0.88□□□□□ -2.27
SMC4-227ENST00000497984 TWIST2Q8WVJ9 160 aa0.88□□□□□ -2.27
SMC4-227ENST00000497984 CACNG8Q8WXS5 425 aa0.88□□□□□ -2.27
SMC4-227ENST00000497984 DNAJC30Q96LL9 226 aa0.88□□□□□ -2.27
SMC4-227ENST00000497984 OLFM3Q96PB7 478 aa0.88□□□□□ -2.27
SMC4-227ENST00000497984 NXF2Q9GZY0 626 aaKnown RBP0.88□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms