RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, human

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALD1-222	ENST00000495522	LYZL2	Q7Z4W2	148 aa		13.17	□□□□□ -0.3
CALD1-222	ENST00000495522	ZFP62	Q8NB50	900 aa	Predicted RBP	13.17	□□□□□ -0.3
CALD1-222	ENST00000495522	OR5A2	Q8NGI9	324 aa		13.17	□□□□□ -0.3
CALD1-222	ENST00000495522	GLYATL2	Q8WU03	294 aa		13.17	□□□□□ -0.3
CALD1-222	ENST00000495522	MSI2	Q96DH6	328 aa	Known RBP	13.17	□□□□□ -0.3
CALD1-222	ENST00000495522	HIST1H2AA	Q96QV6	131 aa		13.17	□□□□□ -0.3
CALD1-222	ENST00000495522	ZFP57	Q9NU63	452 aa		13.17	□□□□□ -0.3
CALD1-222	ENST00000495522	ZNF629	Q9UEG4	869 aa	Predicted RBP	13.17	□□□□□ -0.3
CALD1-222	ENST00000495522	FBXL17	Q9UF56	701 aa		13.17	□□□□□ -0.3
CALD1-222	ENST00000495522		E5RGE8	158 aa		13.17	□□□□□ -0.3
CALD1-222	ENST00000495522		F8W036	122 aa		13.17	□□□□□ -0.3
CALD1-222	ENST00000495522	NUPL2	O15504	423 aa	Known RBP	13.17	□□□□□ -0.3
CALD1-222	ENST00000495522	ATG12	O94817	140 aa		13.17	□□□□□ -0.3
CALD1-222	ENST00000495522	SNAPIN	O95295	136 aa		13.17	□□□□□ -0.3
CALD1-222	ENST00000495522	MBP	P02686	304 aa	Predicted RBP	13.17	□□□□□ -0.3
CALD1-222	ENST00000495522	MST1L	Q2TV78	715 aa		13.17	□□□□□ -0.3
CALD1-222	ENST00000495522	FAM209B	Q5JX69	171 aa		13.17	□□□□□ -0.3
CALD1-222	ENST00000495522	IL22RA1	Q8N6P7	574 aa		13.17	□□□□□ -0.3
CALD1-222	ENST00000495522	OR11L1	Q8NGX0	322 aa		13.17	□□□□□ -0.3
CALD1-222	ENST00000495522	SMIM8	Q96KF7	97 aa		13.17	□□□□□ -0.3
CALD1-222	ENST00000495522	RCC2	Q9P258	522 aa	Known RBP	13.17	□□□□□ -0.3
CALD1-222	ENST00000495522	AMDHD2	Q9Y303	409 aa		13.17	□□□□□ -0.3
CALD1-222	ENST00000495522	NSG2	Q9Y328	171 aa		13.17	□□□□□ -0.3
CALD1-222	ENST00000495522	LIPG	Q9Y5X9	500 aa		13.17	□□□□□ -0.3
CALD1-222	ENST00000495522	CD300LB	A8K4G0	201 aa		13.16	□□□□□ -0.3
CALD1-222	ENST00000495522	JTB	O76095	146 aa		13.16	□□□□□ -0.3
CALD1-222	ENST00000495522	RCC1	P18754	421 aa	Predicted RBP	13.16	□□□□□ -0.3
CALD1-222	ENST00000495522	DUSP1	P28562	367 aa		13.16	□□□□□ -0.3
CALD1-222	ENST00000495522	APLNR	P35414	380 aa		13.16	□□□□□ -0.3
CALD1-222	ENST00000495522	TMEM268	Q5VZI3	342 aa		13.16	□□□□□ -0.3
CALD1-222	ENST00000495522	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	13.16	□□□□□ -0.3
CALD1-222	ENST00000495522	DPPA2	Q7Z7J5	298 aa		13.16	□□□□□ -0.3
CALD1-222	ENST00000495522	FAM185A	Q8N0U4	392 aa		13.16	□□□□□ -0.3
CALD1-222	ENST00000495522	NKX6-2	Q9C056	277 aa	Predicted RBP	13.16	□□□□□ -0.3
CALD1-222	ENST00000495522		Q9N2K0	584 aa		13.16	□□□□□ -0.3
CALD1-222	ENST00000495522	MTCH1	Q9NZJ7	389 aa		13.16	□□□□□ -0.3
CALD1-222	ENST00000495522	ABCD4	O14678	606 aa		13.15	□□□□□ -0.3
CALD1-222	ENST00000495522	PHF1	O43189	567 aa	Predicted RBP	13.15	□□□□□ -0.3
CALD1-222	ENST00000495522	DIRAS3	O95661	229 aa		13.15	□□□□□ -0.3
CALD1-222	ENST00000495522	NAPSA	O96009	420 aa		13.15	□□□□□ -0.3
CALD1-222	ENST00000495522	ARHGDIB	P52566	201 aa		13.15	□□□□□ -0.3
CALD1-222	ENST00000495522	AKR1C2	P52895	323 aa		13.15	□□□□□ -0.3
CALD1-222	ENST00000495522	TMEM33	P57088	247 aa		13.15	□□□□□ -0.3
CALD1-222	ENST00000495522	AKR1C1	Q04828	323 aa		13.15	□□□□□ -0.3
CALD1-222	ENST00000495522	PJVK	Q0ZLH3	352 aa		13.15	□□□□□ -0.3
CALD1-222	ENST00000495522	HS3ST6	Q96QI5	342 aa		13.15	□□□□□ -0.3
CALD1-222	ENST00000495522	C12orf57	Q99622	126 aa		13.15	□□□□□ -0.3
CALD1-222	ENST00000495522	ZNF552	Q9H707	407 aa	Predicted RBP	13.15	□□□□□ -0.3
CALD1-222	ENST00000495522	C12orf49	Q9H741	205 aa		13.15	□□□□□ -0.3
CALD1-222	ENST00000495522	PRSS50	Q9UI38	385 aa		13.15	□□□□□ -0.3
CALD1-222	ENST00000495522		R4GN57	208 aa		13.15	□□□□□ -0.3
CALD1-222	ENST00000495522	ANKRD30BL	A7E2S9	258 aa		13.15	□□□□□ -0.3
CALD1-222	ENST00000495522	DNASE2	O00115	360 aa	Predicted RBP	13.15	□□□□□ -0.3
CALD1-222	ENST00000495522	GALR2	O43603	387 aa	Predicted RBP	13.15	□□□□□ -0.3
CALD1-222	ENST00000495522	GLI4	P10075	376 aa		13.15	□□□□□ -0.3
CALD1-222	ENST00000495522	SULT1A2	P50226	295 aa		13.15	□□□□□ -0.3
CALD1-222	ENST00000495522	SRPX	P78539	464 aa		13.15	□□□□□ -0.3
CALD1-222	ENST00000495522	CLN3	Q13286	438 aa		13.15	□□□□□ -0.3
CALD1-222	ENST00000495522	OR4A4P	Q8NGN8	299 aa		13.15	□□□□□ -0.3
CALD1-222	ENST00000495522	OR1K1	Q8NGR3	316 aa		13.15	□□□□□ -0.3
CALD1-222	ENST00000495522	OR5P3	Q8WZ94	311 aa		13.15	□□□□□ -0.3
CALD1-222	ENST00000495522	TSNAX	Q99598	290 aa	Known RBP	13.15	□□□□□ -0.3
CALD1-222	ENST00000495522	DEFB127	Q9H1M4	99 aa		13.15	□□□□□ -0.3
CALD1-222	ENST00000495522	TMEM9B	Q9NQ34	198 aa		13.15	□□□□□ -0.3
CALD1-222	ENST00000495522	TMED3	Q9Y3Q3	217 aa		13.15	□□□□□ -0.3
CALD1-222	ENST00000495522	ZNF407	Q9C0G0	2248 aa		13.15	□□□□□ -0.3
CALD1-222	ENST00000495522	MED13	Q9UHV7	2174 aa		13.15	□□□□□ -0.3
CALD1-222	ENST00000495522	MPPED1	O15442	326 aa		13.14	□□□□□ -0.31
CALD1-222	ENST00000495522	TK1	P04183	234 aa		13.14	□□□□□ -0.31
CALD1-222	ENST00000495522	SST	P61278	116 aa		13.14	□□□□□ -0.31
CALD1-222	ENST00000495522	HIKESHI	Q53FT3	197 aa		13.14	□□□□□ -0.31
CALD1-222	ENST00000495522	LINC00596	Q86U02	117 aa		13.14	□□□□□ -0.31
CALD1-222	ENST00000495522	SVBP	Q8N300	66 aa		13.14	□□□□□ -0.31
CALD1-222	ENST00000495522	NANOS1	Q8WY41	292 aa	Known RBP	13.14	□□□□□ -0.31
CALD1-222	ENST00000495522	PLK3	Q9H4B4	646 aa		13.14	□□□□□ -0.31
CALD1-222	ENST00000495522	IL36RN	Q9UBH0	155 aa		13.14	□□□□□ -0.31
CALD1-222	ENST00000495522	MPC1	Q9Y5U8	109 aa		13.14	□□□□□ -0.31
CALD1-222	ENST00000495522	C3orf85	A0A1B0GTC6	90 aa		13.14	□□□□□ -0.31
CALD1-222	ENST00000495522	SYNGR1	O43759	233 aa		13.14	□□□□□ -0.31
CALD1-222	ENST00000495522	MED6	O75586	246 aa		13.14	□□□□□ -0.31
CALD1-222	ENST00000495522	IL18BP	O95998	194 aa		13.14	□□□□□ -0.31
CALD1-222	ENST00000495522	WNT5A	P41221	380 aa		13.14	□□□□□ -0.31
CALD1-222	ENST00000495522	BLOC1S1	P78537	153 aa		13.14	□□□□□ -0.31
CALD1-222	ENST00000495522	ZNF169	Q14929	603 aa	Predicted RBP	13.14	□□□□□ -0.31
CALD1-222	ENST00000495522	FBXW12	Q6X9E4	464 aa		13.14	□□□□□ -0.31
CALD1-222	ENST00000495522	UBAC2	Q8NBM4	344 aa		13.14	□□□□□ -0.31
CALD1-222	ENST00000495522	NEK7	Q8TDX7	302 aa		13.14	□□□□□ -0.31
CALD1-222	ENST00000495522	WDYHV1	Q96HA8	205 aa		13.14	□□□□□ -0.31
CALD1-222	ENST00000495522	TP53RK	Q96S44	253 aa		13.14	□□□□□ -0.31
CALD1-222	ENST00000495522	SMIM3	Q9BZL3	60 aa		13.14	□□□□□ -0.31
CALD1-222	ENST00000495522	HRH4	Q9H3N8	390 aa		13.14	□□□□□ -0.31
CALD1-222	ENST00000495522	DNAJC13	O75165	2243 aa		13.13	□□□□□ -0.31
CALD1-222	ENST00000495522	ARHGAP21	Q5T5U3	1957 aa		13.13	□□□□□ -0.31
CALD1-222	ENST00000495522	TRGV5	A0A0B4J1U4	118 aa		13.13	□□□□□ -0.31
CALD1-222	ENST00000495522	KIR2DS1	A0A191URI9	304 aa		13.13	□□□□□ -0.31
CALD1-222	ENST00000495522	OR5B21	A6NL26	309 aa		13.13	□□□□□ -0.31
CALD1-222	ENST00000495522	GPR137B	O60478	399 aa		13.13	□□□□□ -0.31
CALD1-222	ENST00000495522	ZNF806	P0C7X5	589 aa		13.13	□□□□□ -0.31
CALD1-222	ENST00000495522	ADCYAP1	P18509	176 aa		13.13	□□□□□ -0.31
CALD1-222	ENST00000495522	GNRHR	P30968	328 aa		13.13	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms