RNA–Protein interactions for RNA: ENST00000495509.6

PHF1-211, Transcript of PHD finger protein 1, humanhuman

TSL 2

Gene PHF1, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-211ENST00000495509 TEX36Q5VZQ5 186 aa13.12□□□□□ -0.31
PHF1-211ENST00000495509 FIP1L1Q6UN15 594 aaKnown RBP13.12□□□□□ -0.31
PHF1-211ENST00000495509 LINC00596Q86U02 117 aa13.12□□□□□ -0.31
PHF1-211ENST00000495509 ANGPTL6Q8NI99 470 aa13.12□□□□□ -0.31
PHF1-211ENST00000495509 THAP7Q9BT49 309 aaPredicted RBP13.12□□□□□ -0.31
PHF1-211ENST00000495509 IFT22Q9H7X7 185 aa13.12□□□□□ -0.31
PHF1-211ENST00000495509 AK3Q9UIJ7 227 aa13.12□□□□□ -0.31
PHF1-211ENST00000495509 APCP25054 2843 aa13.12□□□□□ -0.31
PHF1-211ENST00000495509 PPIAL4EA0A075B759 164 aa13.12□□□□□ -0.31
PHF1-211ENST00000495509 A0A1B0GW55 424 aa13.12□□□□□ -0.31
PHF1-211ENST00000495509 OOEPA6NGQ2 149 aa13.12□□□□□ -0.31
PHF1-211ENST00000495509 PPIAL4DF5H284 164 aa13.12□□□□□ -0.31
PHF1-211ENST00000495509 GSTP1P09211 210 aaKnown RBP13.12□□□□□ -0.31
PHF1-211ENST00000495509 DUX4L2P0CJ85 424 aa13.12□□□□□ -0.31
PHF1-211ENST00000495509 DUX4L3P0CJ86 424 aa13.12□□□□□ -0.31
PHF1-211ENST00000495509 DUX4L4P0CJ87 422 aa13.12□□□□□ -0.31
PHF1-211ENST00000495509 DUX4L5P0CJ88 424 aa13.12□□□□□ -0.31
PHF1-211ENST00000495509 DUX4L6P0CJ89 424 aa13.12□□□□□ -0.31
PHF1-211ENST00000495509 DUX4L7P0CJ90 424 aa13.12□□□□□ -0.31
PHF1-211ENST00000495509 PPIAL4FP0DN26 164 aa13.12□□□□□ -0.31
PHF1-211ENST00000495509 IL7P13232 177 aa13.12□□□□□ -0.31
PHF1-211ENST00000495509 DUX4L9Q6RFH8 374 aaPredicted RBP13.12□□□□□ -0.31
PHF1-211ENST00000495509 DNM1P46Q6ZS02 220 aa13.12□□□□□ -0.31
PHF1-211ENST00000495509 C1orf87Q8N0U7 546 aa13.12□□□□□ -0.31
PHF1-211ENST00000495509 SMIM4Q8WVI0 70 aa13.12□□□□□ -0.31
PHF1-211ENST00000495509 FCAMRQ8WWV6 532 aa13.12□□□□□ -0.31
PHF1-211ENST00000495509 DPCDQ9BVM2 203 aaPredicted RBP13.12□□□□□ -0.31
PHF1-211ENST00000495509 CHST6Q9GZX3 395 aa13.12□□□□□ -0.31
PHF1-211ENST00000495509 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.12□□□□□ -0.31
PHF1-211ENST00000495509 DUX4Q9UBX2 424 aa13.12□□□□□ -0.31
PHF1-211ENST00000495509 ZNF222Q9UK12 451 aa13.12□□□□□ -0.31
PHF1-211ENST00000495509 PPIAL4AQ9Y536 164 aa13.12□□□□□ -0.31
PHF1-211ENST00000495509 TMEM82A0PJX8 343 aa13.11□□□□□ -0.31
PHF1-211ENST00000495509 GABARAPH6UMI1 98 aa13.11□□□□□ -0.31
PHF1-211ENST00000495509 LGALS8O00214 317 aa13.11□□□□□ -0.31
PHF1-211ENST00000495509 GSTZ1O43708 216 aaPredicted RBP13.11□□□□□ -0.31
PHF1-211ENST00000495509 ORC5O43913 435 aa13.11□□□□□ -0.31
PHF1-211ENST00000495509 MUC1P15941 1255 aaPredicted RBP13.11□□□□□ -0.31
PHF1-211ENST00000495509 LMO1P25800 156 aa13.11□□□□□ -0.31
PHF1-211ENST00000495509 EFNA4P52798 201 aa13.11□□□□□ -0.31
PHF1-211ENST00000495509 ZMYND11Q15326 602 aa13.11□□□□□ -0.31
PHF1-211ENST00000495509 STUMQ69YW2 141 aa13.11□□□□□ -0.31
PHF1-211ENST00000495509 GVQW1Q8N7I0 195 aa13.11□□□□□ -0.31
PHF1-211ENST00000495509 SETD6Q8TBK2 473 aa13.11□□□□□ -0.31
PHF1-211ENST00000495509 GPX8Q8TED1 209 aa13.11□□□□□ -0.31
PHF1-211ENST00000495509 CCL13Q99616 98 aa13.11□□□□□ -0.31
PHF1-211ENST00000495509 PPA2Q9H2U2 334 aa13.11□□□□□ -0.31
PHF1-211ENST00000495509 TMEM165Q9HC07 324 aa13.11□□□□□ -0.31
PHF1-211ENST00000495509 DLL4Q9NR61 685 aa13.11□□□□□ -0.31
PHF1-211ENST00000495509 ING3Q9NXR8 418 aa13.11□□□□□ -0.31
PHF1-211ENST00000495509 RABL2AQ9UBK7 228 aaPredicted RBP13.11□□□□□ -0.31
PHF1-211ENST00000495509 GLS2Q9UI32 602 aa13.11□□□□□ -0.31
PHF1-211ENST00000495509 RABL2BQ9UNT1 228 aa13.11□□□□□ -0.31
PHF1-211ENST00000495509 HECTD1Q9ULT8 2610 aa13.11□□□□□ -0.31
PHF1-211ENST00000495509 CSMD2Q7Z408 3487 aa13.1□□□□□ -0.31
PHF1-211ENST00000495509 LINC00854A0A1B0GVQ3 168 aa13.1□□□□□ -0.31
PHF1-211ENST00000495509 SERPINE3A8MV23 424 aa13.1□□□□□ -0.31
PHF1-211ENST00000495509 MCRIP1C9JLW8 97 aa13.1□□□□□ -0.31
PHF1-211ENST00000495509 IFNL4K9M1U5 179 aa13.1□□□□□ -0.31
PHF1-211ENST00000495509 SELLP14151 372 aa13.1□□□□□ -0.31
PHF1-211ENST00000495509 SSTR2P30874 369 aa13.1□□□□□ -0.31
PHF1-211ENST00000495509 GNG2P59768 71 aa13.1□□□□□ -0.31
PHF1-211ENST00000495509 ARFRP1Q13795 201 aa13.1□□□□□ -0.31
PHF1-211ENST00000495509 PAN3Q58A45 887 aaKnown RBP13.1□□□□□ -0.31
PHF1-211ENST00000495509 AVPI1Q5T686 147 aa13.1□□□□□ -0.31
PHF1-211ENST00000495509 C17orf107Q6ZR85 190 aa13.1□□□□□ -0.31
PHF1-211ENST00000495509 TRAPPC6BQ86SZ2 158 aa13.1□□□□□ -0.31
PHF1-211ENST00000495509 ZNRF1Q8ND25 227 aa13.1□□□□□ -0.31
PHF1-211ENST00000495509 OR4S1Q8NGB4 309 aa13.1□□□□□ -0.31
PHF1-211ENST00000495509 NEK7Q8TDX7 302 aa13.1□□□□□ -0.31
PHF1-211ENST00000495509 C15orf40Q8WUR7 153 aa13.1□□□□□ -0.31
PHF1-211ENST00000495509 TRIM63Q969Q1 353 aa13.1□□□□□ -0.31
PHF1-211ENST00000495509 ZNF230Q9UIE0 474 aaPredicted RBP13.1□□□□□ -0.31
PHF1-211ENST00000495509 MAB21L2Q9Y586 359 aa13.1□□□□□ -0.31
PHF1-211ENST00000495509 ANKRD17O75179 2603 aaKnown RBP13.1□□□□□ -0.31
PHF1-211ENST00000495509 MAP1AP78559 2803 aaPredicted RBP13.1□□□□□ -0.31
PHF1-211ENST00000495509 A0A1W2PQ09 198 aa13.09□□□□□ -0.31
PHF1-211ENST00000495509 IGHV4-39P01824 125 aa13.09□□□□□ -0.31
PHF1-211ENST00000495509 SPNP16150 400 aa13.09□□□□□ -0.31
PHF1-211ENST00000495509 MRPS11P82912 194 aaKnown RBP13.09□□□□□ -0.31
PHF1-211ENST00000495509 CARTPTQ16568 116 aa13.09□□□□□ -0.31
PHF1-211ENST00000495509 PNLIPRP3Q17RR3 467 aa13.09□□□□□ -0.31
PHF1-211ENST00000495509 LYPD2Q6UXB3 125 aa13.09□□□□□ -0.31
PHF1-211ENST00000495509 GDPD3Q7L5L3 318 aa13.09□□□□□ -0.31
PHF1-211ENST00000495509 ASCC1Q8N9N2 400 aaKnown RBP13.09□□□□□ -0.31
PHF1-211ENST00000495509 PLPPR1Q8TBJ4 325 aa13.09□□□□□ -0.31
PHF1-211ENST00000495509 SHARPINQ9H0F6 387 aa13.09□□□□□ -0.31
PHF1-211ENST00000495509 SPACA1Q9HBV2 294 aa13.09□□□□□ -0.31
PHF1-211ENST00000495509 TBC1D24Q9ULP9 559 aa13.09□□□□□ -0.31
PHF1-211ENST00000495509 PLEKHA6Q9Y2H5 1048 aa13.09□□□□□ -0.31
PHF1-211ENST00000495509 ASH1LQ9NR48 2969 aaKnown RBP13.09□□□□□ -0.31
PHF1-211ENST00000495509 TRAV38-1A0A0B4J264 116 aa13.09□□□□□ -0.31
PHF1-211ENST00000495509 TNFRSF13BO14836 293 aaPredicted RBP13.09□□□□□ -0.31
PHF1-211ENST00000495509 ZNF737O75373 536 aa13.09□□□□□ -0.31
PHF1-211ENST00000495509 LPLP06858 475 aa13.09□□□□□ -0.31
PHF1-211ENST00000495509 BTG1P62324 171 aa13.09□□□□□ -0.31
PHF1-211ENST00000495509 Q6ZPA2 131 aa13.09□□□□□ -0.31
PHF1-211ENST00000495509 MAFIPQ8WZ33 124 aa13.09□□□□□ -0.31
PHF1-211ENST00000495509 GAFA1Q96PS6 74 aa13.09□□□□□ -0.31
PHF1-211ENST00000495509 CMSS1Q9BQ75 279 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms