RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	TGIF2LY	Q8IUE0	185 aa		11.32	□□□□□ -0.6
APTX-231	ENST00000494973	OR8H2	Q8N162	312 aa		11.32	□□□□□ -0.6
APTX-231	ENST00000494973	SUMF2	Q8NBJ7	301 aa		11.32	□□□□□ -0.6
APTX-231	ENST00000494973	C10orf105	Q8TEF2	133 aa		11.32	□□□□□ -0.6
APTX-231	ENST00000494973	NEIL1	Q96FI4	390 aa	Predicted RBP	11.32	□□□□□ -0.6
APTX-231	ENST00000494973	ARHGAP5-AS1	Q96IT6	56 aa		11.32	□□□□□ -0.6
APTX-231	ENST00000494973	GAFA1	Q96PS6	74 aa		11.32	□□□□□ -0.6
APTX-231	ENST00000494973	TSC22D3	Q99576	134 aa		11.32	□□□□□ -0.6
APTX-231	ENST00000494973	TMEM246	Q9BRR3	403 aa		11.32	□□□□□ -0.6
APTX-231	ENST00000494973	NCOR1P1	Q9H4R4	102 aa		11.32	□□□□□ -0.6
APTX-231	ENST00000494973	RAB9B	Q9NP90	201 aa		11.32	□□□□□ -0.6
APTX-231	ENST00000494973	IL36RN	Q9UBH0	155 aa		11.32	□□□□□ -0.6
APTX-231	ENST00000494973	MGAT4A	Q9UM21	535 aa		11.32	□□□□□ -0.6
APTX-231	ENST00000494973	ABCA12	Q86UK0	2595 aa		11.32	□□□□□ -0.6
APTX-231	ENST00000494973		A0A0A6YYD4	124 aa		11.31	□□□□□ -0.6
APTX-231	ENST00000494973	TRAV24	A0A0B4J272	114 aa		11.31	□□□□□ -0.6
APTX-231	ENST00000494973	CEACAM18	A8MTB9	384 aa		11.31	□□□□□ -0.6
APTX-231	ENST00000494973		K7N7A8	449 aa		11.31	□□□□□ -0.6
APTX-231	ENST00000494973	CTDSPL	O15194	276 aa		11.31	□□□□□ -0.6
APTX-231	ENST00000494973	MELTF	P08582	738 aa		11.31	□□□□□ -0.6
APTX-231	ENST00000494973	CD3G	P09693	182 aa		11.31	□□□□□ -0.6
APTX-231	ENST00000494973	PLA2G7	Q13093	441 aa		11.31	□□□□□ -0.6
APTX-231	ENST00000494973	ARFRP1	Q13795	201 aa		11.31	□□□□□ -0.6
APTX-231	ENST00000494973	GRK1	Q15835	563 aa		11.31	□□□□□ -0.6
APTX-231	ENST00000494973	CLEC12B	Q2HXU8	276 aa		11.31	□□□□□ -0.6
APTX-231	ENST00000494973	HACD4	Q5VWC8	232 aa		11.31	□□□□□ -0.6
APTX-231	ENST00000494973	GDPD3	Q7L5L3	318 aa		11.31	□□□□□ -0.6
APTX-231	ENST00000494973	CD177	Q8N6Q3	437 aa		11.31	□□□□□ -0.6
APTX-231	ENST00000494973	TMEM185A	Q8NFB2	350 aa		11.31	□□□□□ -0.6
APTX-231	ENST00000494973	OR5T2	Q8NGG2	359 aa		11.31	□□□□□ -0.6
APTX-231	ENST00000494973	ST8SIA4	Q92187	359 aa		11.31	□□□□□ -0.6
APTX-231	ENST00000494973	FOXC2	Q99958	501 aa		11.31	□□□□□ -0.6
APTX-231	ENST00000494973	PECR	Q9BY49	303 aa		11.31	□□□□□ -0.6
APTX-231	ENST00000494973	BPESC1	Q9GZL8	116 aa		11.31	□□□□□ -0.6
APTX-231	ENST00000494973	AUNIP	Q9H7T9	357 aa		11.31	□□□□□ -0.6
APTX-231	ENST00000494973	PATZ1	Q9HBE1	687 aa	Known RBP	11.31	□□□□□ -0.6
APTX-231	ENST00000494973	C12orf4	Q9NQ89	552 aa		11.31	□□□□□ -0.6
APTX-231	ENST00000494973	MRPS7	Q9Y2R9	242 aa	Known RBP	11.31	□□□□□ -0.6
APTX-231	ENST00000494973	CENPE	Q02224	2701 aa		11.31	□□□□□ -0.6
APTX-231	ENST00000494973	HECTD1	Q9ULT8	2610 aa		11.3	□□□□□ -0.6
APTX-231	ENST00000494973	TMEM30CP	A0ZSE6	113 aa		11.3	□□□□□ -0.6
APTX-231	ENST00000494973	ZNF737	O75373	536 aa		11.3	□□□□□ -0.6
APTX-231	ENST00000494973	ZNF205	O95201	554 aa		11.3	□□□□□ -0.6
APTX-231	ENST00000494973	TK1	P04183	234 aa		11.3	□□□□□ -0.6
APTX-231	ENST00000494973	ERP29	P30040	261 aa	Known RBP	11.3	□□□□□ -0.6
APTX-231	ENST00000494973	PRSS3	P35030	304 aa		11.3	□□□□□ -0.6
APTX-231	ENST00000494973	ACTB	P60709	375 aa		11.3	□□□□□ -0.6
APTX-231	ENST00000494973	ACTG1	P63261	375 aa		11.3	□□□□□ -0.6
APTX-231	ENST00000494973	SSBP1	Q04837	148 aa	Known RBP	11.3	□□□□□ -0.6
APTX-231	ENST00000494973	ZNF846	Q147U1	533 aa		11.3	□□□□□ -0.6
APTX-231	ENST00000494973	MOGAT2	Q3SYC2	334 aa		11.3	□□□□□ -0.6
APTX-231	ENST00000494973	ZNF260	Q3ZCT1	412 aa		11.3	□□□□□ -0.6
APTX-231	ENST00000494973	CDNF	Q49AH0	187 aa		11.3	□□□□□ -0.6
APTX-231	ENST00000494973	ESCO2	Q56NI9	601 aa		11.3	□□□□□ -0.6
APTX-231	ENST00000494973		Q5PR19	223 aa		11.3	□□□□□ -0.6
APTX-231	ENST00000494973	AVPI1	Q5T686	147 aa		11.3	□□□□□ -0.6
APTX-231	ENST00000494973	SIGIRR	Q6IA17	410 aa		11.3	□□□□□ -0.6
APTX-231	ENST00000494973	TRAT1	Q6PIZ9	186 aa		11.3	□□□□□ -0.6
APTX-231	ENST00000494973	DNM1P46	Q6ZS02	220 aa		11.3	□□□□□ -0.6
APTX-231	ENST00000494973	C6orf201	Q7Z4U5	140 aa		11.3	□□□□□ -0.6
APTX-231	ENST00000494973	GDPD1	Q8N9F7	314 aa		11.3	□□□□□ -0.6
APTX-231	ENST00000494973	C19orf18	Q8NEA5	215 aa		11.3	□□□□□ -0.6
APTX-231	ENST00000494973	SEH1L	Q96EE3	360 aa		11.3	□□□□□ -0.6
APTX-231	ENST00000494973	CCL13	Q99616	98 aa		11.3	□□□□□ -0.6
APTX-231	ENST00000494973	CMSS1	Q9BQ75	279 aa	Known RBP	11.3	□□□□□ -0.6
APTX-231	ENST00000494973	CHST6	Q9GZX3	395 aa		11.3	□□□□□ -0.6
APTX-231	ENST00000494973	PPA2	Q9H2U2	334 aa		11.3	□□□□□ -0.6
APTX-231	ENST00000494973	ETAA1	Q9NY74	926 aa		11.3	□□□□□ -0.6
APTX-231	ENST00000494973	SLC25A10	Q9UBX3	287 aa	Predicted RBP	11.3	□□□□□ -0.6
APTX-231	ENST00000494973	CRYBG3	Q68DQ2	2970 aa		11.29	□□□□□ -0.6
APTX-231	ENST00000494973	LRBA	P50851	2863 aa		11.29	□□□□□ -0.6
APTX-231	ENST00000494973	TRBV23-1	A0A0A0MS06	115 aa		11.29	□□□□□ -0.6
APTX-231	ENST00000494973		A0A1W2PPH5	198 aa		11.29	□□□□□ -0.6
APTX-231	ENST00000494973	VWC2L	B2RUY7	222 aa		11.29	□□□□□ -0.6
APTX-231	ENST00000494973	GABARAP	H6UMI1	98 aa		11.29	□□□□□ -0.6
APTX-231	ENST00000494973	TNFRSF13B	O14836	293 aa	Predicted RBP	11.29	□□□□□ -0.6
APTX-231	ENST00000494973	ECD	O95905	644 aa	Predicted RBP	11.29	□□□□□ -0.6
APTX-231	ENST00000494973	LPL	P06858	475 aa		11.29	□□□□□ -0.6
APTX-231	ENST00000494973	GNB3	P16520	340 aa		11.29	□□□□□ -0.6
APTX-231	ENST00000494973	DTYMK	P23919	212 aa		11.29	□□□□□ -0.6
APTX-231	ENST00000494973	CD40LG	P29965	261 aa		11.29	□□□□□ -0.6
APTX-231	ENST00000494973	OR3A1	P47881	315 aa		11.29	□□□□□ -0.6
APTX-231	ENST00000494973	TMEM50B	P56557	158 aa		11.29	□□□□□ -0.6
APTX-231	ENST00000494973	LSAMP	Q13449	338 aa		11.29	□□□□□ -0.6
APTX-231	ENST00000494973	PLAC9	Q5JTB6	97 aa		11.29	□□□□□ -0.6
APTX-231	ENST00000494973	CD276	Q5ZPR3	534 aa		11.29	□□□□□ -0.6
APTX-231	ENST00000494973	SLC35E4	Q6ICL7	350 aa		11.29	□□□□□ -0.6
APTX-231	ENST00000494973	ZNF554	Q86TJ5	538 aa		11.29	□□□□□ -0.6
APTX-231	ENST00000494973	FCAMR	Q8WWV6	532 aa		11.29	□□□□□ -0.6
APTX-231	ENST00000494973	DMRTB1	Q96MA1	342 aa		11.29	□□□□□ -0.6
APTX-231	ENST00000494973	SOST	Q9BQB4	213 aa		11.29	□□□□□ -0.6
APTX-231	ENST00000494973	SULT4A1	Q9BR01	284 aa		11.29	□□□□□ -0.6
APTX-231	ENST00000494973	CHMP1A	Q9HD42	196 aa	Predicted RBP	11.29	□□□□□ -0.6
APTX-231	ENST00000494973	AKIP1	Q9NQ31	210 aa		11.29	□□□□□ -0.6
APTX-231	ENST00000494973	OR6C3	Q9NZP0	311 aa		11.29	□□□□□ -0.6
APTX-231	ENST00000494973	CLN8	Q9UBY8	286 aa		11.29	□□□□□ -0.6
APTX-231	ENST00000494973	MAB21L2	Q9Y586	359 aa		11.29	□□□□□ -0.6
APTX-231	ENST00000494973		V9GYH0	126 aa		11.29	□□□□□ -0.6
APTX-231	ENST00000494973	TRBV6-6	A0A0A6YYG2	114 aa		11.28	□□□□□ -0.6
APTX-231	ENST00000494973		A0A0G2JMP0	313 aa		11.28	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms