RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 OR4X2Q8NGF9 303 aa18.54■□□□□ 0.56
COL27A1-208ENST00000494780 MYDGFQ969H8 173 aa18.54■□□□□ 0.56
COL27A1-208ENST00000494780 ZNF286AQ9HBT8 521 aa18.54■□□□□ 0.56
COL27A1-208ENST00000494780 NEK6Q9HC98 313 aa18.54■□□□□ 0.56
COL27A1-208ENST00000494780 IMPAD1Q9NX62 359 aa18.54■□□□□ 0.56
COL27A1-208ENST00000494780 DNAH3Q8TD57 4116 aa18.53■□□□□ 0.56
COL27A1-208ENST00000494780 DAPL1A0PJW8 107 aa18.53■□□□□ 0.56
COL27A1-208ENST00000494780 FAM172BPA6NC97 362 aa18.53■□□□□ 0.56
COL27A1-208ENST00000494780 BUB1B-PAK6H3BSN5 160 aa18.53■□□□□ 0.56
COL27A1-208ENST00000494780 PF4P02776 101 aa18.53■□□□□ 0.56
COL27A1-208ENST00000494780 PRRX1P54821 245 aa18.53■□□□□ 0.56
COL27A1-208ENST00000494780 SLC35A2P78381 396 aa18.53■□□□□ 0.56
COL27A1-208ENST00000494780 TPTE2P1Q5T6R2 138 aa18.53■□□□□ 0.56
COL27A1-208ENST00000494780 OR4D6Q8NGJ1 314 aa18.53■□□□□ 0.56
COL27A1-208ENST00000494780 OR13C3Q8NGS6 347 aa18.53■□□□□ 0.56
COL27A1-208ENST00000494780 OR13C9Q8NGT0 318 aa18.53■□□□□ 0.56
COL27A1-208ENST00000494780 RNFT2Q96EX2 444 aa18.53■□□□□ 0.56
COL27A1-208ENST00000494780 A0A087X0M5 115 aa18.52■□□□□ 0.56
COL27A1-208ENST00000494780 A0A1B0GX30 115 aa18.52■□□□□ 0.56
COL27A1-208ENST00000494780 OOSP1A8MZH6 123 aa18.52■□□□□ 0.56
COL27A1-208ENST00000494780 LY6LH3BQJ8 138 aa18.52■□□□□ 0.56
COL27A1-208ENST00000494780 SCN1BQ07699 218 aa18.52■□□□□ 0.56
COL27A1-208ENST00000494780 KRBOX4Q5JUW0 171 aa18.52■□□□□ 0.56
COL27A1-208ENST00000494780 SLC25A30Q5SVS4 291 aa18.52■□□□□ 0.56
COL27A1-208ENST00000494780 CCDC144NLQ6NUI1 221 aa18.52■□□□□ 0.56
COL27A1-208ENST00000494780 Q6P435 159 aa18.52■□□□□ 0.56
COL27A1-208ENST00000494780 RNF144BQ7Z419 303 aa18.52■□□□□ 0.56
COL27A1-208ENST00000494780 OR51A4Q8NGJ6 313 aa18.52■□□□□ 0.56
COL27A1-208ENST00000494780 OR5D18Q8NGL1 313 aa18.52■□□□□ 0.56
COL27A1-208ENST00000494780 OR10AC1Q8NH08 325 aa18.52■□□□□ 0.56
COL27A1-208ENST00000494780 COQ2Q96H96 371 aa18.52■□□□□ 0.56
COL27A1-208ENST00000494780 RCC1LQ96I51 464 aaKnown RBP18.52■□□□□ 0.56
COL27A1-208ENST00000494780 SPACA5Q96QH8 159 aa18.52■□□□□ 0.56
COL27A1-208ENST00000494780 KIAA2026Q5HYC2 2103 aa18.52■□□□□ 0.55
COL27A1-208ENST00000494780 ZNF729A6NN14 1252 aaPredicted RBP18.51■□□□□ 0.55
COL27A1-208ENST00000494780 M0QZK8 103 aa18.51■□□□□ 0.55
COL27A1-208ENST00000494780 SLC33A1O00400 549 aaPredicted RBP18.51■□□□□ 0.55
COL27A1-208ENST00000494780 MPIG6BO95866 241 aa18.51■□□□□ 0.55
COL27A1-208ENST00000494780 AMY1AP04745 511 aa18.51■□□□□ 0.55
COL27A1-208ENST00000494780 AMY2AP04746 511 aa18.51■□□□□ 0.55
COL27A1-208ENST00000494780 MNDAP41218 407 aa18.51■□□□□ 0.55
COL27A1-208ENST00000494780 MEDAGQ5VYS4 303 aa18.51■□□□□ 0.55
COL27A1-208ENST00000494780 ZCCHC4Q9H5U6 513 aa18.51■□□□□ 0.55
COL27A1-208ENST00000494780 OR6C3Q9NZP0 311 aa18.51■□□□□ 0.55
COL27A1-208ENST00000494780 SAC3D1A6NKF1 404 aa18.5■□□□□ 0.55
COL27A1-208ENST00000494780 OR4C45A6NMZ5 311 aa18.5■□□□□ 0.55
COL27A1-208ENST00000494780 DEGS1O15121 323 aa18.5■□□□□ 0.55
COL27A1-208ENST00000494780 DUS4LO95620 317 aaKnown RBP18.5■□□□□ 0.55
COL27A1-208ENST00000494780 SNRPGP62308 76 aaKnown RBP18.5■□□□□ 0.55
COL27A1-208ENST00000494780 C17orf58Q2M2W7 97 aa18.5■□□□□ 0.55
COL27A1-208ENST00000494780 ACBD7Q8N6N7 88 aa18.5■□□□□ 0.55
COL27A1-208ENST00000494780 PELI1Q96FA3 418 aa18.5■□□□□ 0.55
COL27A1-208ENST00000494780 HRASLS5Q96KN8 279 aa18.5■□□□□ 0.55
COL27A1-208ENST00000494780 J3QLW9 94 aa18.49■□□□□ 0.55
COL27A1-208ENST00000494780 ATP5HO75947 161 aa18.49■□□□□ 0.55
COL27A1-208ENST00000494780 CLIC3O95833 236 aa18.49■□□□□ 0.55
COL27A1-208ENST00000494780 DBTP11182 482 aaKnown RBP18.49■□□□□ 0.55
COL27A1-208ENST00000494780 ZNF19P17023 458 aa18.49■□□□□ 0.55
COL27A1-208ENST00000494780 OR3A4PP47883 348 aa18.49■□□□□ 0.55
COL27A1-208ENST00000494780 ALKBH1Q13686 389 aaKnown RBP18.49■□□□□ 0.55
COL27A1-208ENST00000494780 ATXN7L3Q14CW9 347 aaPredicted RBP18.49■□□□□ 0.55
COL27A1-208ENST00000494780 OR9G1Q8NH87 305 aa18.49■□□□□ 0.55
COL27A1-208ENST00000494780 MRPL48Q96GC5 212 aaKnown RBP18.49■□□□□ 0.55
COL27A1-208ENST00000494780 C4orf36Q96KX1 117 aa18.49■□□□□ 0.55
COL27A1-208ENST00000494780 MYCBPQ99417 103 aaPredicted RBP18.49■□□□□ 0.55
COL27A1-208ENST00000494780 PCDHB16Q9NRJ7 776 aa18.49■□□□□ 0.55
COL27A1-208ENST00000494780 ING3Q9NXR8 418 aa18.49■□□□□ 0.55
COL27A1-208ENST00000494780 MYRFQ9Y2G1 1151 aa18.49■□□□□ 0.55
COL27A1-208ENST00000494780 KBTBD11-OT1A0A1B0GTJ5 212 aa18.48■□□□□ 0.55
COL27A1-208ENST00000494780 SH2D7A6NKC9 451 aaPredicted RBP18.48■□□□□ 0.55
COL27A1-208ENST00000494780 K7EIL1 84 aa18.48■□□□□ 0.55
COL27A1-208ENST00000494780 RPSAP08865 295 aaKnown RBP18.48■□□□□ 0.55
COL27A1-208ENST00000494780 FAM106CPP0CH98 169 aa18.48■□□□□ 0.55
COL27A1-208ENST00000494780 TMEM225BP0DP42 221 aa18.48■□□□□ 0.55
COL27A1-208ENST00000494780 RBM39Q14498 530 aaKnown RBP18.48■□□□□ 0.55
COL27A1-208ENST00000494780 CDK5R1Q15078 307 aa18.48■□□□□ 0.55
COL27A1-208ENST00000494780 C10orf99Q6UWK7 81 aa18.48■□□□□ 0.55
COL27A1-208ENST00000494780 THNSL2Q86YJ6 484 aa18.48■□□□□ 0.55
COL27A1-208ENST00000494780 OSR2Q8N2R0 312 aa18.48■□□□□ 0.55
COL27A1-208ENST00000494780 PPIL3Q9H2H8 161 aaKnown RBP18.48■□□□□ 0.55
COL27A1-208ENST00000494780 INPP5EQ9NRR6 644 aa18.48■□□□□ 0.55
COL27A1-208ENST00000494780 EXOGQ9Y2C4 368 aaKnown RBP18.48■□□□□ 0.55
COL27A1-208ENST00000494780 ORC6Q9Y5N6 252 aa18.48■□□□□ 0.55
COL27A1-208ENST00000494780 SNTNA6NMZ2 147 aa18.47■□□□□ 0.55
COL27A1-208ENST00000494780 ALPLP05186 524 aa18.47■□□□□ 0.55
COL27A1-208ENST00000494780 HCKP08631 526 aa18.47■□□□□ 0.55
COL27A1-208ENST00000494780 CGB3P0DN86 165 aa18.47■□□□□ 0.55
COL27A1-208ENST00000494780 CGB7P0DN87 165 aa18.47■□□□□ 0.55
COL27A1-208ENST00000494780 MTNR1BP49286 362 aa18.47■□□□□ 0.55
COL27A1-208ENST00000494780 ZP1P60852 638 aa18.47■□□□□ 0.55
COL27A1-208ENST00000494780 KHDC1LQ5JSQ8 128 aa18.47■□□□□ 0.55
COL27A1-208ENST00000494780 C9orf152Q5JTZ5 239 aa18.47■□□□□ 0.55
COL27A1-208ENST00000494780 SERPINA12Q8IW75 414 aa18.47■□□□□ 0.55
COL27A1-208ENST00000494780 OR5D14Q8NGL3 314 aa18.47■□□□□ 0.55
COL27A1-208ENST00000494780 RPEQ96AT9 228 aa18.47■□□□□ 0.55
COL27A1-208ENST00000494780 KIRREL1Q96J84 757 aa18.47■□□□□ 0.55
COL27A1-208ENST00000494780 NCOR1P1Q9H4R4 102 aa18.47■□□□□ 0.55
COL27A1-208ENST00000494780 MOB4Q9Y3A3 225 aa18.47■□□□□ 0.55
COL27A1-208ENST00000494780 AMMECR1Q9Y4X0 333 aaPredicted RBP18.47■□□□□ 0.55
COL27A1-208ENST00000494780 HSPE1-MOB4S4R3N1 261 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms