RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 PPP1R35Q8TAP8 253 aa11.95□□□□□ -0.5
ATG4B-224ENST00000494132 COQ2Q96H96 371 aa11.95□□□□□ -0.5
ATG4B-224ENST00000494132 OR5M11Q96RB7 305 aa11.95□□□□□ -0.5
ATG4B-224ENST00000494132 ZNF184Q99676 751 aaPredicted RBP11.95□□□□□ -0.5
ATG4B-224ENST00000494132 SSX3Q99909 188 aa11.95□□□□□ -0.5
ATG4B-224ENST00000494132 PPIL3Q9H2H8 161 aaKnown RBP11.95□□□□□ -0.5
ATG4B-224ENST00000494132 DPAGT1Q9H3H5 408 aa11.95□□□□□ -0.5
ATG4B-224ENST00000494132 SEBOXQ9HB31 216 aaPredicted RBP11.95□□□□□ -0.5
ATG4B-224ENST00000494132 ING4Q9UNL4 249 aa11.95□□□□□ -0.5
ATG4B-224ENST00000494132 ERGIC3Q9Y282 383 aa11.95□□□□□ -0.5
ATG4B-224ENST00000494132 LINC00312Q9Y6C7 94 aa11.95□□□□□ -0.5
ATG4B-224ENST00000494132 A0A0G2JK05 382 aa11.94□□□□□ -0.5
ATG4B-224ENST00000494132 A0A1W2PP11 408 aa11.94□□□□□ -0.5
ATG4B-224ENST00000494132 BTBD17A6NE02 478 aa11.94□□□□□ -0.5
ATG4B-224ENST00000494132 MAS1P04201 325 aa11.94□□□□□ -0.5
ATG4B-224ENST00000494132 IGFBP3P17936 291 aaPredicted RBP11.94□□□□□ -0.5
ATG4B-224ENST00000494132 SERPINA2P20848 420 aa11.94□□□□□ -0.5
ATG4B-224ENST00000494132 LMO1P25800 156 aa11.94□□□□□ -0.5
ATG4B-224ENST00000494132 TAS2R43P59537 309 aa11.94□□□□□ -0.5
ATG4B-224ENST00000494132 MEF2CQ06413 473 aaPredicted RBP11.94□□□□□ -0.5
ATG4B-224ENST00000494132 SRSF4Q08170 494 aaKnown RBP11.94□□□□□ -0.5
ATG4B-224ENST00000494132 DYNC1I2Q13409 638 aaKnown RBP11.94□□□□□ -0.5
ATG4B-224ENST00000494132 MIDNQ504T8 468 aa11.94□□□□□ -0.5
ATG4B-224ENST00000494132 LDLRAD2Q5SZI1 272 aa11.94□□□□□ -0.5
ATG4B-224ENST00000494132 PRAMEF5Q5TYX0 476 aa11.94□□□□□ -0.5
ATG4B-224ENST00000494132 DYNAPQ8N1N2 210 aa11.94□□□□□ -0.5
ATG4B-224ENST00000494132 BEND2Q8NDZ0 799 aa11.94□□□□□ -0.5
ATG4B-224ENST00000494132 DYRK2Q92630 601 aa11.94□□□□□ -0.5
ATG4B-224ENST00000494132 CPNE2Q96FN4 548 aaPredicted RBP11.94□□□□□ -0.5
ATG4B-224ENST00000494132 TMEM138Q9NPI0 162 aa11.94□□□□□ -0.5
ATG4B-224ENST00000494132 VPREB3Q9UKI3 123 aa11.94□□□□□ -0.5
ATG4B-224ENST00000494132 PIN1P1O15428 100 aa11.93□□□□□ -0.5
ATG4B-224ENST00000494132 CLPXO76031 633 aa11.93□□□□□ -0.5
ATG4B-224ENST00000494132 ALDOBP05062 364 aa11.93□□□□□ -0.5
ATG4B-224ENST00000494132 JUNBP17275 347 aaPredicted RBP11.93□□□□□ -0.5
ATG4B-224ENST00000494132 GDNFP39905 211 aa11.93□□□□□ -0.5
ATG4B-224ENST00000494132 PTGFRP43088 359 aa11.93□□□□□ -0.5
ATG4B-224ENST00000494132 LGALS4P56470 323 aa11.93□□□□□ -0.5
ATG4B-224ENST00000494132 PAN3Q58A45 887 aaKnown RBP11.93□□□□□ -0.5
ATG4B-224ENST00000494132 KRBOX4Q5JUW0 171 aa11.93□□□□□ -0.5
ATG4B-224ENST00000494132 ELP2Q6IA86 826 aa11.93□□□□□ -0.5
ATG4B-224ENST00000494132 JAGN1Q8N5M9 183 aa11.93□□□□□ -0.5
ATG4B-224ENST00000494132 DERL3Q96Q80 235 aa11.93□□□□□ -0.5
ATG4B-224ENST00000494132 ZNF747Q9BV97 191 aa11.93□□□□□ -0.5
ATG4B-224ENST00000494132 SCN3BQ9NY72 215 aa11.93□□□□□ -0.5
ATG4B-224ENST00000494132 TRGV10A0A0A0MS01 117 aa11.92□□□□□ -0.5
ATG4B-224ENST00000494132 TRBV5-7A0A0A0MS05 114 aa11.92□□□□□ -0.5
ATG4B-224ENST00000494132 TRAV24A0A0B4J272 114 aa11.92□□□□□ -0.5
ATG4B-224ENST00000494132 ODAMA1E959 279 aa11.92□□□□□ -0.5
ATG4B-224ENST00000494132 ODF3BA8MYP8 253 aa11.92□□□□□ -0.5
ATG4B-224ENST00000494132 MYF6P23409 242 aa11.92□□□□□ -0.5
ATG4B-224ENST00000494132 ERP29P30040 261 aaKnown RBP11.92□□□□□ -0.5
ATG4B-224ENST00000494132 TGFBR2P37173 567 aa11.92□□□□□ -0.5
ATG4B-224ENST00000494132 RAB13P51153 203 aa11.92□□□□□ -0.5
ATG4B-224ENST00000494132 SLC35A2P78381 396 aa11.92□□□□□ -0.5
ATG4B-224ENST00000494132 MED22Q15528 200 aa11.92□□□□□ -0.5
ATG4B-224ENST00000494132 LRRC75BQ2VPJ9 315 aa11.92□□□□□ -0.5
ATG4B-224ENST00000494132 SLC22A6Q4U2R8 563 aa11.92□□□□□ -0.5
ATG4B-224ENST00000494132 FAM27D1Q5T7N8 215 aa11.92□□□□□ -0.5
ATG4B-224ENST00000494132 DHRS7BQ6IAN0 325 aaPredicted RBP11.92□□□□□ -0.5
ATG4B-224ENST00000494132 ASCL4Q6XD76 172 aa11.92□□□□□ -0.5
ATG4B-224ENST00000494132 OR51T1Q8NGJ9 327 aa11.92□□□□□ -0.5
ATG4B-224ENST00000494132 OR13D1Q8NGV5 346 aa11.92□□□□□ -0.5
ATG4B-224ENST00000494132 PLPPR1Q8TBJ4 325 aa11.92□□□□□ -0.5
ATG4B-224ENST00000494132 MYDGFQ969H8 173 aa11.92□□□□□ -0.5
ATG4B-224ENST00000494132 MUL1Q969V5 352 aa11.92□□□□□ -0.5
ATG4B-224ENST00000494132 CNBD2Q96M20 576 aa11.92□□□□□ -0.5
ATG4B-224ENST00000494132 S100A13Q99584 98 aa11.92□□□□□ -0.5
ATG4B-224ENST00000494132 TMED9Q9BVK6 235 aa11.92□□□□□ -0.5
ATG4B-224ENST00000494132 MND1Q9BWT6 205 aa11.92□□□□□ -0.5
ATG4B-224ENST00000494132 SLITRK2Q9H156 845 aa11.92□□□□□ -0.5
ATG4B-224ENST00000494132 METTL9Q9H1A3 318 aa11.92□□□□□ -0.5
ATG4B-224ENST00000494132 RHOFQ9HBH0 211 aa11.92□□□□□ -0.5
ATG4B-224ENST00000494132 CKLFQ9UBR5 152 aa11.92□□□□□ -0.5
ATG4B-224ENST00000494132 ST3GAL6Q9Y274 331 aa11.92□□□□□ -0.5
ATG4B-224ENST00000494132 LSM2Q9Y333 95 aaKnown RBP11.92□□□□□ -0.5
ATG4B-224ENST00000494132 UBE2J1Q9Y385 318 aaPredicted RBP11.92□□□□□ -0.5
ATG4B-224ENST00000494132 SESN1Q9Y6P5 492 aa11.92□□□□□ -0.5
ATG4B-224ENST00000494132 TRAV39A0A0B4J263 110 aa11.91□□□□□ -0.5
ATG4B-224ENST00000494132 CSTBP04080 98 aaKnown RBP11.91□□□□□ -0.5
ATG4B-224ENST00000494132 FSTP19883 344 aa11.91□□□□□ -0.5
ATG4B-224ENST00000494132 CDK2P24941 298 aa11.91□□□□□ -0.5
ATG4B-224ENST00000494132 GLP1RP43220 463 aa11.91□□□□□ -0.5
ATG4B-224ENST00000494132 SSX2Q16385 188 aa11.91□□□□□ -0.5
ATG4B-224ENST00000494132 UTF1Q5T230 341 aa11.91□□□□□ -0.5
ATG4B-224ENST00000494132 ZNF626Q68DY1 528 aa11.91□□□□□ -0.5
ATG4B-224ENST00000494132 GDPGP1Q6ZNW5 385 aa11.91□□□□□ -0.5
ATG4B-224ENST00000494132 Q6ZSV7 163 aa11.91□□□□□ -0.5
ATG4B-224ENST00000494132 OSR2Q8N2R0 312 aa11.91□□□□□ -0.5
ATG4B-224ENST00000494132 CHST4Q8NCG5 386 aa11.91□□□□□ -0.5
ATG4B-224ENST00000494132 OR4F5Q8NH21 305 aa11.91□□□□□ -0.5
ATG4B-224ENST00000494132 CDCA4Q9BXL8 241 aa11.91□□□□□ -0.5
ATG4B-224ENST00000494132 ANKRD60Q9BZ19 345 aa11.91□□□□□ -0.5
ATG4B-224ENST00000494132 CCDC90BQ9GZT6 254 aa11.91□□□□□ -0.5
ATG4B-224ENST00000494132 MEGF9Q9H1U4 602 aa11.91□□□□□ -0.5
ATG4B-224ENST00000494132 TMEM133Q9H2Q1 129 aa11.91□□□□□ -0.5
ATG4B-224ENST00000494132 VCX3BQ9H321 246 aa11.91□□□□□ -0.5
ATG4B-224ENST00000494132 KIF25Q9UIL4 384 aa11.91□□□□□ -0.5
ATG4B-224ENST00000494132 IGHV2-26A0A0B4J1V2 119 aa11.9□□□□□ -0.5
ATG4B-224ENST00000494132 GEMIN2O14893 280 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms