RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 TGOLN2O43493 480 aa9.94□□□□□ -0.82
RFC4-214ENST00000494047 NDUFS6O75380 124 aaKnown RBP9.94□□□□□ -0.82
RFC4-214ENST00000494047 KLF7O75840 302 aaPredicted RBP9.94□□□□□ -0.82
RFC4-214ENST00000494047 PPYP01298 95 aa9.94□□□□□ -0.82
RFC4-214ENST00000494047 SERPINA7P05543 415 aa9.94□□□□□ -0.82
RFC4-214ENST00000494047 S100A6P06703 90 aa9.94□□□□□ -0.82
RFC4-214ENST00000494047 ZNF32P17041 273 aa9.94□□□□□ -0.82
RFC4-214ENST00000494047 NME2P22392 152 aa9.94□□□□□ -0.82
RFC4-214ENST00000494047 PTAFRP25105 342 aa9.94□□□□□ -0.82
RFC4-214ENST00000494047 CD80P33681 288 aa9.94□□□□□ -0.82
RFC4-214ENST00000494047 ARR3P36575 388 aa9.94□□□□□ -0.82
RFC4-214ENST00000494047 MDH2P40926 338 aaKnown RBP9.94□□□□□ -0.82
RFC4-214ENST00000494047 SSPNQ14714 243 aa9.94□□□□□ -0.82
RFC4-214ENST00000494047 RSPO1Q2MKA7 263 aaPredicted RBP9.94□□□□□ -0.82
RFC4-214ENST00000494047 SNAI3Q3KNW1 292 aa9.94□□□□□ -0.82
RFC4-214ENST00000494047 COLCA1Q6ZS62 124 aa9.94□□□□□ -0.82
RFC4-214ENST00000494047 TOMM40LQ969M1 308 aa9.94□□□□□ -0.82
RFC4-214ENST00000494047 MRPL24Q96A35 216 aaKnown RBP9.94□□□□□ -0.82
RFC4-214ENST00000494047 APOBEC3DQ96AK3 386 aaPredicted RBP9.94□□□□□ -0.82
RFC4-214ENST00000494047 MSI2Q96DH6 328 aaKnown RBP9.94□□□□□ -0.82
RFC4-214ENST00000494047 MALSU1Q96EH3 234 aa9.94□□□□□ -0.82
RFC4-214ENST00000494047 ADGRG7Q96K78 797 aa9.94□□□□□ -0.82
RFC4-214ENST00000494047 SOX7Q9BT81 388 aa9.94□□□□□ -0.82
RFC4-214ENST00000494047 PAPOLGQ9BWT3 736 aaKnown RBP9.94□□□□□ -0.82
RFC4-214ENST00000494047 SLC35B3Q9H1N7 401 aa9.94□□□□□ -0.82
RFC4-214ENST00000494047 PLEKHF2Q9H8W4 249 aa9.94□□□□□ -0.82
RFC4-214ENST00000494047 KCNJ16Q9NPI9 418 aa9.94□□□□□ -0.82
RFC4-214ENST00000494047 C19orf12Q9NSK7 152 aa9.94□□□□□ -0.82
RFC4-214ENST00000494047 FRYQ5TBA9 3013 aa9.94□□□□□ -0.82
RFC4-214ENST00000494047 C3orf85A0A1B0GTC6 90 aa9.93□□□□□ -0.82
RFC4-214ENST00000494047 OR5B21A6NL26 309 aa9.93□□□□□ -0.82
RFC4-214ENST00000494047 TRDCB7Z8K6 153 aa9.93□□□□□ -0.82
RFC4-214ENST00000494047 MPPED1O15442 326 aa9.93□□□□□ -0.82
RFC4-214ENST00000494047 SCGB1D2O95969 90 aa9.93□□□□□ -0.82
RFC4-214ENST00000494047 PRH1P02810 166 aa9.93□□□□□ -0.82
RFC4-214ENST00000494047 VDAC1P21796 283 aa9.93□□□□□ -0.82
RFC4-214ENST00000494047 ACKR3P25106 362 aa9.93□□□□□ -0.82
RFC4-214ENST00000494047 NKX2-1P43699 371 aaPredicted RBP9.93□□□□□ -0.82
RFC4-214ENST00000494047 B3GALT5-AS1P59052 145 aa9.93□□□□□ -0.82
RFC4-214ENST00000494047 FGF12P61328 243 aa9.93□□□□□ -0.82
RFC4-214ENST00000494047 VAMP2P63027 116 aa9.93□□□□□ -0.82
RFC4-214ENST00000494047 GUK1Q16774 197 aa9.93□□□□□ -0.82
RFC4-214ENST00000494047 ACSF3Q4G176 576 aaPredicted RBP9.93□□□□□ -0.82
RFC4-214ENST00000494047 MIDNQ504T8 468 aa9.93□□□□□ -0.82
RFC4-214ENST00000494047 PHYHD1Q5SRE7 291 aa9.93□□□□□ -0.82
RFC4-214ENST00000494047 DCAF12Q5T6F0 453 aa9.93□□□□□ -0.82
RFC4-214ENST00000494047 PKD1L2Q7Z442 2459 aa9.93□□□□□ -0.82
RFC4-214ENST00000494047 ZNF695Q8IW36 515 aa9.93□□□□□ -0.82
RFC4-214ENST00000494047 COL27A1Q8IZC6 1860 aaPredicted RBP9.93□□□□□ -0.82
RFC4-214ENST00000494047 FBXL14Q8N1E6 418 aa9.93□□□□□ -0.82
RFC4-214ENST00000494047 OR2C3Q8N628 320 aa9.93□□□□□ -0.82
RFC4-214ENST00000494047 OR4D5Q8NGN0 318 aa9.93□□□□□ -0.82
RFC4-214ENST00000494047 JSRP1Q96MG2 331 aaPredicted RBP9.93□□□□□ -0.82
RFC4-214ENST00000494047 GNRHR2Q96P88 292 aa9.93□□□□□ -0.82
RFC4-214ENST00000494047 IP6K3Q96PC2 410 aa9.93□□□□□ -0.82
RFC4-214ENST00000494047 HIST1H2AAQ96QV6 131 aa9.93□□□□□ -0.82
RFC4-214ENST00000494047 FAAP24Q9BTP7 215 aa9.93□□□□□ -0.82
RFC4-214ENST00000494047 SAV1Q9H4B6 383 aaPredicted RBP9.93□□□□□ -0.82
RFC4-214ENST00000494047 PROK2Q9HC23 129 aa9.93□□□□□ -0.82
RFC4-214ENST00000494047 GPR35Q9HC97 309 aa9.93□□□□□ -0.82
RFC4-214ENST00000494047 LYRM2Q9NU23 88 aaPredicted RBP9.93□□□□□ -0.82
RFC4-214ENST00000494047 OCIAD1Q9NX40 245 aa9.93□□□□□ -0.82
RFC4-214ENST00000494047 TREM2Q9NZC2 230 aa9.93□□□□□ -0.82
RFC4-214ENST00000494047 CACFD1Q9UGQ2 172 aa9.93□□□□□ -0.82
RFC4-214ENST00000494047 TCFL5Q9UL49 500 aa9.93□□□□□ -0.82
RFC4-214ENST00000494047 FAM208BQ5VWN6 2430 aa9.93□□□□□ -0.82
RFC4-214ENST00000494047 EML6Q6ZMW3 1958 aa9.93□□□□□ -0.82
RFC4-214ENST00000494047 CXorf65A6NEN9 183 aa9.92□□□□□ -0.82
RFC4-214ENST00000494047 ZNF98A6NK75 572 aa9.92□□□□□ -0.82
RFC4-214ENST00000494047 ZNF724A8MTY0 619 aa9.92□□□□□ -0.82
RFC4-214ENST00000494047 FAM157AC9JC47 383 aa9.92□□□□□ -0.82
RFC4-214ENST00000494047 ZNF587BE7ETH6 402 aa9.92□□□□□ -0.82
RFC4-214ENST00000494047 H0Y980 276 aa9.92□□□□□ -0.82
RFC4-214ENST00000494047 DEGS1O15121 323 aa9.92□□□□□ -0.82
RFC4-214ENST00000494047 PHF1O43189 567 aaPredicted RBP9.92□□□□□ -0.82
RFC4-214ENST00000494047 MRPL33O75394 65 aaKnown RBP9.92□□□□□ -0.82
RFC4-214ENST00000494047 SYNGR4O95473 234 aa9.92□□□□□ -0.82
RFC4-214ENST00000494047 TAGLN2P37802 199 aaKnown RBP9.92□□□□□ -0.82
RFC4-214ENST00000494047 CD200P41217 278 aa9.92□□□□□ -0.82
RFC4-214ENST00000494047 CYB561P49447 251 aa9.92□□□□□ -0.82
RFC4-214ENST00000494047 PSG4Q00888 419 aa9.92□□□□□ -0.82
RFC4-214ENST00000494047 TLE4Q04727 773 aa9.92□□□□□ -0.82
RFC4-214ENST00000494047 ZNF616Q08AN1 781 aa9.92□□□□□ -0.82
RFC4-214ENST00000494047 CEACAM16Q2WEN9 425 aa9.92□□□□□ -0.82
RFC4-214ENST00000494047 SHEQ5VZ18 495 aa9.92□□□□□ -0.82
RFC4-214ENST00000494047 ZNF774Q6NX45 483 aa9.92□□□□□ -0.82
RFC4-214ENST00000494047 GGNQ86UU5 652 aa9.92□□□□□ -0.82
RFC4-214ENST00000494047 C1QL4Q86Z23 238 aa9.92□□□□□ -0.82
RFC4-214ENST00000494047 Q8IYB0 196 aa9.92□□□□□ -0.82
RFC4-214ENST00000494047 ZDHHC23Q8IYP9 409 aa9.92□□□□□ -0.82
RFC4-214ENST00000494047 ZNF611Q8N823 705 aa9.92□□□□□ -0.82
RFC4-214ENST00000494047 OR5L1Q8NGL2 311 aa9.92□□□□□ -0.82
RFC4-214ENST00000494047 OR5D13Q8NGL4 314 aa9.92□□□□□ -0.82
RFC4-214ENST00000494047 NANOS1Q8WY41 292 aaKnown RBP9.92□□□□□ -0.82
RFC4-214ENST00000494047 ROBO4Q8WZ75 1007 aa9.92□□□□□ -0.82
RFC4-214ENST00000494047 BOD1Q96IK1 185 aa9.92□□□□□ -0.82
RFC4-214ENST00000494047 UCN2Q96RP3 112 aa9.92□□□□□ -0.82
RFC4-214ENST00000494047 SRXN1Q9BYN0 137 aa9.92□□□□□ -0.82
RFC4-214ENST00000494047 WNT5BQ9H1J7 359 aa9.92□□□□□ -0.82
RFC4-214ENST00000494047 IFT22Q9H7X7 185 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms