RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 H3BMM0 161 aa1.48□□□□□ -2.17
SMC4-223ENST00000493695 RGS5O15539 181 aa1.48□□□□□ -2.17
SMC4-223ENST00000493695 TCF21O43680 179 aa1.48□□□□□ -2.17
SMC4-223ENST00000493695 SYNGR2O43760 224 aa1.48□□□□□ -2.17
SMC4-223ENST00000493695 CA2P00918 260 aa1.48□□□□□ -2.17
SMC4-223ENST00000493695 PDYNP01213 254 aa1.48□□□□□ -2.17
SMC4-223ENST00000493695 IVLP07476 585 aa1.48□□□□□ -2.17
SMC4-223ENST00000493695 SOD3P08294 240 aa1.48□□□□□ -2.17
SMC4-223ENST00000493695 GTF2H1P32780 548 aa1.48□□□□□ -2.17
SMC4-223ENST00000493695 TTPAP49638 278 aa1.48□□□□□ -2.17
SMC4-223ENST00000493695 XKP51811 444 aa1.48□□□□□ -2.17
SMC4-223ENST00000493695 DSTNP60981 165 aa1.48□□□□□ -2.17
SMC4-223ENST00000493695 C18orf21Q32NC0 220 aaPredicted RBP1.48□□□□□ -2.17
SMC4-223ENST00000493695 C6orf183Q5T699 404 aa1.48□□□□□ -2.17
SMC4-223ENST00000493695 ERICH5Q6P6B1 374 aa1.48□□□□□ -2.17
SMC4-223ENST00000493695 SPNS3Q6ZMD2 512 aa1.48□□□□□ -2.17
SMC4-223ENST00000493695 CYHR1Q6ZMK1 362 aa1.48□□□□□ -2.17
SMC4-223ENST00000493695 MARCH3Q86UD3 253 aa1.48□□□□□ -2.17
SMC4-223ENST00000493695 ZIC4Q8N9L1 334 aa1.48□□□□□ -2.17
SMC4-223ENST00000493695 DRAXINQ8NBI3 349 aaPredicted RBP1.48□□□□□ -2.17
SMC4-223ENST00000493695 UBE2WQ96B02 151 aa1.48□□□□□ -2.17
SMC4-223ENST00000493695 OLFM3Q96PB7 478 aa1.48□□□□□ -2.17
SMC4-223ENST00000493695 TRIB3Q96RU7 358 aa1.48□□□□□ -2.17
SMC4-223ENST00000493695 B9D2Q9BPU9 175 aa1.48□□□□□ -2.17
SMC4-223ENST00000493695 ZNF436Q9C0F3 470 aaPredicted RBP1.48□□□□□ -2.17
SMC4-223ENST00000493695 RAB1BQ9H0U4 201 aa1.48□□□□□ -2.17
SMC4-223ENST00000493695 CYB5R1Q9UHQ9 305 aa1.48□□□□□ -2.17
SMC4-223ENST00000493695 POLR3AO14802 1390 aaPredicted RBP1.47□□□□□ -2.17
SMC4-223ENST00000493695 NUP205Q92621 2012 aa1.47□□□□□ -2.17
SMC4-223ENST00000493695 TMEM250H0YL14 139 aa1.47□□□□□ -2.17
SMC4-223ENST00000493695 PSCAO43653 123 aa1.47□□□□□ -2.17
SMC4-223ENST00000493695 DEDDO75618 318 aa1.47□□□□□ -2.17
SMC4-223ENST00000493695 SOX14O95416 240 aa1.47□□□□□ -2.17
SMC4-223ENST00000493695 CDS2O95674 445 aa1.47□□□□□ -2.17
SMC4-223ENST00000493695 OPN1SWP03999 348 aa1.47□□□□□ -2.17
SMC4-223ENST00000493695 PRPS1L1P21108 318 aa1.47□□□□□ -2.17
SMC4-223ENST00000493695 PRTN3P24158 256 aa1.47□□□□□ -2.17
SMC4-223ENST00000493695 TTMPQ5BVD1 217 aa1.47□□□□□ -2.17
SMC4-223ENST00000493695 Q6ZT83 130 aa1.47□□□□□ -2.17
SMC4-223ENST00000493695 ZNF738Q8NE65 137 aa1.47□□□□□ -2.17
SMC4-223ENST00000493695 OR2Y1Q8NGV0 311 aa1.47□□□□□ -2.17
SMC4-223ENST00000493695 OR6K3Q8NGY3 331 aa1.47□□□□□ -2.17
SMC4-223ENST00000493695 C2orf15Q8WU43 125 aaKnown RBP1.47□□□□□ -2.17
SMC4-223ENST00000493695 MAL2Q969L2 176 aa1.47□□□□□ -2.17
SMC4-223ENST00000493695 RAD51AP1Q96B01 352 aa1.47□□□□□ -2.17
SMC4-223ENST00000493695 CPB2Q96IY4 423 aa1.47□□□□□ -2.17
SMC4-223ENST00000493695 GLT1D1Q96MS3 346 aa1.47□□□□□ -2.17
SMC4-223ENST00000493695 ZNF396Q96N95 335 aaPredicted RBP1.47□□□□□ -2.17
SMC4-223ENST00000493695 CIB1Q99828 191 aa1.47□□□□□ -2.17
SMC4-223ENST00000493695 OR2D2Q9H210 308 aa1.47□□□□□ -2.17
SMC4-223ENST00000493695 DIABLOQ9NR28 239 aa1.47□□□□□ -2.17
SMC4-223ENST00000493695 CLEC2DQ9UHP7 191 aa1.47□□□□□ -2.17
SMC4-223ENST00000493695 C14orf166Q9Y224 244 aaKnown RBP1.47□□□□□ -2.17
SMC4-223ENST00000493695 IGHV1-45A0A0A0MS14 117 aa1.46□□□□□ -2.18
SMC4-223ENST00000493695 A0A0B4J2C4 111 aa1.46□□□□□ -2.18
SMC4-223ENST00000493695 J3QRE1 110 aa1.46□□□□□ -2.18
SMC4-223ENST00000493695 hCG_2039718K7EN88 272 aa1.46□□□□□ -2.18
SMC4-223ENST00000493695 CDIPTO14735 213 aa1.46□□□□□ -2.18
SMC4-223ENST00000493695 PDCD6O75340 191 aa1.46□□□□□ -2.18
SMC4-223ENST00000493695 MLNP12872 115 aa1.46□□□□□ -2.18
SMC4-223ENST00000493695 GTF2F2P13984 249 aa1.46□□□□□ -2.18
SMC4-223ENST00000493695 CTLA4P16410 223 aa1.46□□□□□ -2.18
SMC4-223ENST00000493695 IL12BP29460 328 aa1.46□□□□□ -2.18
SMC4-223ENST00000493695 DEKP35659 375 aaKnown RBP1.46□□□□□ -2.18
SMC4-223ENST00000493695 PLTPP55058 493 aa1.46□□□□□ -2.18
SMC4-223ENST00000493695 CCL23P55773 120 aa1.46□□□□□ -2.18
SMC4-223ENST00000493695 C1QTNF8P60827 252 aa1.46□□□□□ -2.18
SMC4-223ENST00000493695 STX4Q12846 297 aa1.46□□□□□ -2.18
SMC4-223ENST00000493695 ZCWPW2Q504Y3 356 aa1.46□□□□□ -2.18
SMC4-223ENST00000493695 LYZL2Q7Z4W2 148 aa1.46□□□□□ -2.18
SMC4-223ENST00000493695 ST13P4Q8IZP2 240 aaPredicted RBP1.46□□□□□ -2.18
SMC4-223ENST00000493695 SLC25A45Q8N413 288 aa1.46□□□□□ -2.18
SMC4-223ENST00000493695 ACBD4Q8NC06 268 aa1.46□□□□□ -2.18
SMC4-223ENST00000493695 OR5P3Q8WZ94 311 aa1.46□□□□□ -2.18
SMC4-223ENST00000493695 SLC25A44Q96H78 314 aaPredicted RBP1.46□□□□□ -2.18
SMC4-223ENST00000493695 COPS4Q9BT78 406 aa1.46□□□□□ -2.18
SMC4-223ENST00000493695 SUCNR1Q9BXA5 334 aa1.46□□□□□ -2.18
SMC4-223ENST00000493695 GABARAPL1Q9H0R8 117 aa1.46□□□□□ -2.18
SMC4-223ENST00000493695 MFSD1Q9H3U5 465 aa1.46□□□□□ -2.18
SMC4-223ENST00000493695 RBMX2Q9Y388 322 aaKnown RBP1.46□□□□□ -2.18
SMC4-223ENST00000493695 PLXNB1O43157 2135 aa1.45□□□□□ -2.18
SMC4-223ENST00000493695 TRAV8-3A0A0A6YYJ7 113 aa1.45□□□□□ -2.18
SMC4-223ENST00000493695 IGHV2-26A0A0B4J1V2 119 aa1.45□□□□□ -2.18
SMC4-223ENST00000493695 C3orf84H3BNL1 204 aa1.45□□□□□ -2.18
SMC4-223ENST00000493695 PLPP3O14495 311 aa1.45□□□□□ -2.18
SMC4-223ENST00000493695 POP7O75817 140 aaKnown RBP1.45□□□□□ -2.18
SMC4-223ENST00000493695 IGKV5-2P06315 115 aa1.45□□□□□ -2.18
SMC4-223ENST00000493695 SCGB1C2P0DMR2 95 aa1.45□□□□□ -2.18
SMC4-223ENST00000493695 GABRA1P14867 456 aa1.45□□□□□ -2.18
SMC4-223ENST00000493695 TSPOP30536 169 aa1.45□□□□□ -2.18
SMC4-223ENST00000493695 ZNF83P51522 516 aa1.45□□□□□ -2.18
SMC4-223ENST00000493695 MMDQ15546 238 aa1.45□□□□□ -2.18
SMC4-223ENST00000493695 PSG3Q16557 428 aa1.45□□□□□ -2.18
SMC4-223ENST00000493695 GOLGA7BQ2TAP0 167 aa1.45□□□□□ -2.18
SMC4-223ENST00000493695 ACTBL2Q562R1 376 aa1.45□□□□□ -2.18
SMC4-223ENST00000493695 Q6ZS52 159 aa1.45□□□□□ -2.18
SMC4-223ENST00000493695 TMPPEQ6ZT21 453 aa1.45□□□□□ -2.18
SMC4-223ENST00000493695 OR4K17Q8NGC6 315 aa1.45□□□□□ -2.18
SMC4-223ENST00000493695 OR2AE1Q8NHA4 323 aa1.45□□□□□ -2.18
SMC4-223ENST00000493695 CLHC1Q8NHS4 586 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms