RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 SUMF2Q8NBJ7 301 aa9.2□□□□□ -0.94
PHACTR4-204ENST00000493669 RTN4IP1Q8WWV3 396 aaPredicted RBP9.2□□□□□ -0.94
PHACTR4-204ENST00000493669 ST8SIA2Q92186 375 aa9.2□□□□□ -0.94
PHACTR4-204ENST00000493669 TOMM40LQ969M1 308 aa9.2□□□□□ -0.94
PHACTR4-204ENST00000493669 STARD4Q96DR4 205 aa9.2□□□□□ -0.94
PHACTR4-204ENST00000493669 BCL2L14Q9BZR8 327 aa9.2□□□□□ -0.94
PHACTR4-204ENST00000493669 ZNF71Q9NQZ8 489 aaPredicted RBP9.2□□□□□ -0.94
PHACTR4-204ENST00000493669 DNAJB11Q9UBS4 358 aa9.2□□□□□ -0.94
PHACTR4-204ENST00000493669 ATP23Q9Y6H3 246 aa9.2□□□□□ -0.94
PHACTR4-204ENST00000493669 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.2□□□□□ -0.94
PHACTR4-204ENST00000493669 A0A1W2PR80 420 aa9.2□□□□□ -0.94
PHACTR4-204ENST00000493669 SLC34A2O95436 690 aa9.2□□□□□ -0.94
PHACTR4-204ENST00000493669 PPYP01298 95 aa9.2□□□□□ -0.94
PHACTR4-204ENST00000493669 TK1P04183 234 aa9.2□□□□□ -0.94
PHACTR4-204ENST00000493669 NUP62P37198 522 aaPredicted RBP9.2□□□□□ -0.94
PHACTR4-204ENST00000493669 ERVK11-1P61568 191 aa9.2□□□□□ -0.94
PHACTR4-204ENST00000493669 FOXF2Q12947 444 aa9.2□□□□□ -0.94
PHACTR4-204ENST00000493669 COMMD7Q86VX2 200 aa9.2□□□□□ -0.94
PHACTR4-204ENST00000493669 HS3ST6Q96QI5 342 aa9.2□□□□□ -0.94
PHACTR4-204ENST00000493669 ARPC5LQ9BPX5 153 aa9.2□□□□□ -0.94
PHACTR4-204ENST00000493669 RNF126Q9BV68 326 aa9.2□□□□□ -0.94
PHACTR4-204ENST00000493669 SLC2A9Q9NRM0 540 aa9.2□□□□□ -0.94
PHACTR4-204ENST00000493669 A0A1B0GW55 424 aa9.2□□□□□ -0.94
PHACTR4-204ENST00000493669 DUX4L2P0CJ85 424 aa9.2□□□□□ -0.94
PHACTR4-204ENST00000493669 DUX4L3P0CJ86 424 aa9.2□□□□□ -0.94
PHACTR4-204ENST00000493669 DUX4L4P0CJ87 422 aa9.2□□□□□ -0.94
PHACTR4-204ENST00000493669 DUX4L5P0CJ88 424 aa9.2□□□□□ -0.94
PHACTR4-204ENST00000493669 DUX4L6P0CJ89 424 aa9.2□□□□□ -0.94
PHACTR4-204ENST00000493669 DUX4L7P0CJ90 424 aa9.2□□□□□ -0.94
PHACTR4-204ENST00000493669 SRPXP78539 464 aa9.2□□□□□ -0.94
PHACTR4-204ENST00000493669 PSG7Q13046 419 aa9.2□□□□□ -0.94
PHACTR4-204ENST00000493669 KRTCAP3Q53RY4 240 aa9.2□□□□□ -0.94
PHACTR4-204ENST00000493669 ZNF880Q6PDB4 577 aa9.2□□□□□ -0.94
PHACTR4-204ENST00000493669 MOB1BQ7L9L4 216 aa9.2□□□□□ -0.94
PHACTR4-204ENST00000493669 CXorf67Q86X51 503 aaPredicted RBP9.2□□□□□ -0.94
PHACTR4-204ENST00000493669 NEK7Q8TDX7 302 aa9.2□□□□□ -0.94
PHACTR4-204ENST00000493669 DCUN1D4Q92564 292 aa9.2□□□□□ -0.94
PHACTR4-204ENST00000493669 OR10C1Q96KK4 312 aa9.2□□□□□ -0.94
PHACTR4-204ENST00000493669 SLC25A32Q9H2D1 315 aa9.2□□□□□ -0.94
PHACTR4-204ENST00000493669 IL36RNQ9UBH0 155 aa9.2□□□□□ -0.94
PHACTR4-204ENST00000493669 DUX4Q9UBX2 424 aa9.2□□□□□ -0.94
PHACTR4-204ENST00000493669 NMBP08949 121 aa9.19□□□□□ -0.94
PHACTR4-204ENST00000493669 HOXD4P09016 255 aaPredicted RBP9.19□□□□□ -0.94
PHACTR4-204ENST00000493669 KITLGP21583 273 aa9.19□□□□□ -0.94
PHACTR4-204ENST00000493669 AADACP22760 399 aa9.19□□□□□ -0.94
PHACTR4-204ENST00000493669 FXYD4P59646 89 aa9.19□□□□□ -0.94
PHACTR4-204ENST00000493669 RND3P61587 244 aa9.19□□□□□ -0.94
PHACTR4-204ENST00000493669 TMEM187Q14656 261 aa9.19□□□□□ -0.94
PHACTR4-204ENST00000493669 ALKAL2Q6UX46 152 aa9.19□□□□□ -0.94
PHACTR4-204ENST00000493669 SEM1Q6ZVN7 128 aa9.19□□□□□ -0.94
PHACTR4-204ENST00000493669 BHLHA15Q7RTS1 189 aaPredicted RBP9.19□□□□□ -0.94
PHACTR4-204ENST00000493669 BATF2Q8N1L9 274 aa9.19□□□□□ -0.94
PHACTR4-204ENST00000493669 RBMXL3Q8N7X1 1067 aaKnown RBP9.19□□□□□ -0.94
PHACTR4-204ENST00000493669 KLF14Q8TD94 323 aaPredicted RBP9.19□□□□□ -0.94
PHACTR4-204ENST00000493669 NRIP2Q9BQI9 281 aa9.19□□□□□ -0.94
PHACTR4-204ENST00000493669 RASL12Q9NYN1 266 aa9.19□□□□□ -0.94
PHACTR4-204ENST00000493669 TUBD1Q9UJT1 453 aa9.19□□□□□ -0.94
PHACTR4-204ENST00000493669 TRAV24A0A0B4J272 114 aa9.19□□□□□ -0.94
PHACTR4-204ENST00000493669 OR5H1A6NKK0 313 aa9.19□□□□□ -0.94
PHACTR4-204ENST00000493669 TUSC2O75896 110 aa9.19□□□□□ -0.94
PHACTR4-204ENST00000493669 PGA5P0DJD9 388 aa9.19□□□□□ -0.94
PHACTR4-204ENST00000493669 ATXN7L3Q14CW9 347 aaPredicted RBP9.19□□□□□ -0.94
PHACTR4-204ENST00000493669 OR8G1Q15617 311 aa9.19□□□□□ -0.94
PHACTR4-204ENST00000493669 C3orf36Q3SXR2 165 aa9.19□□□□□ -0.94
PHACTR4-204ENST00000493669 SPIN3Q5JUX0 258 aa9.19□□□□□ -0.94
PHACTR4-204ENST00000493669 C1orf185Q5T7R7 199 aa9.19□□□□□ -0.94
PHACTR4-204ENST00000493669 WDR86Q86TI4 376 aa9.19□□□□□ -0.94
PHACTR4-204ENST00000493669 ZNF610Q8N9Z0 462 aa9.19□□□□□ -0.94
PHACTR4-204ENST00000493669 SPERTQ8NA61 448 aa9.19□□□□□ -0.94
PHACTR4-204ENST00000493669 SCCPDHQ8NBX0 429 aa9.19□□□□□ -0.94
PHACTR4-204ENST00000493669 OR8G5Q8NG78 346 aa9.19□□□□□ -0.94
PHACTR4-204ENST00000493669 ANGPTL6Q8NI99 470 aa9.19□□□□□ -0.94
PHACTR4-204ENST00000493669 STOML3Q8TAV4 291 aa9.19□□□□□ -0.94
PHACTR4-204ENST00000493669 MRPL30Q8TCC3 161 aaKnown RBP9.19□□□□□ -0.94
PHACTR4-204ENST00000493669 CCDC120Q96HB5 630 aa9.19□□□□□ -0.94
PHACTR4-204ENST00000493669 AQP10Q96PS8 301 aa9.19□□□□□ -0.94
PHACTR4-204ENST00000493669 ZFP57Q9NU63 452 aa9.19□□□□□ -0.94
PHACTR4-204ENST00000493669 SSUH2Q9Y2M2 353 aa9.19□□□□□ -0.94
PHACTR4-204ENST00000493669 MKRN2OSH3BPM6 223 aa9.18□□□□□ -0.94
PHACTR4-204ENST00000493669 DEGS1O15121 323 aa9.18□□□□□ -0.94
PHACTR4-204ENST00000493669 SPDEFO95238 335 aa9.18□□□□□ -0.94
PHACTR4-204ENST00000493669 HOXB5P09067 269 aa9.18□□□□□ -0.94
PHACTR4-204ENST00000493669 CECR9P0C854 216 aa9.18□□□□□ -0.94
PHACTR4-204ENST00000493669 TIMP3P35625 211 aa9.18□□□□□ -0.94
PHACTR4-204ENST00000493669 ERVS71-1P61550 626 aa9.18□□□□□ -0.94
PHACTR4-204ENST00000493669 NAAAQ02083 359 aa9.18□□□□□ -0.94
PHACTR4-204ENST00000493669 Q6P435 159 aa9.18□□□□□ -0.94
PHACTR4-204ENST00000493669 FIP1L1Q6UN15 594 aaKnown RBP9.18□□□□□ -0.94
PHACTR4-204ENST00000493669 LIAT1Q6ZQX7 453 aa9.18□□□□□ -0.94
PHACTR4-204ENST00000493669 LGI3Q8N145 548 aa9.18□□□□□ -0.94
PHACTR4-204ENST00000493669 OR4A4PQ8NGN8 299 aa9.18□□□□□ -0.94
PHACTR4-204ENST00000493669 TMEM100Q9NV29 134 aa9.18□□□□□ -0.94
PHACTR4-204ENST00000493669 PRR13Q9NZ81 148 aa9.18□□□□□ -0.94
PHACTR4-204ENST00000493669 PURGQ9UJV8 347 aaKnown RBP9.18□□□□□ -0.94
PHACTR4-204ENST00000493669 FBXO9Q9UK97 447 aaPredicted RBP9.18□□□□□ -0.94
PHACTR4-204ENST00000493669 PCDHB10Q9UN67 800 aa9.18□□□□□ -0.94
PHACTR4-204ENST00000493669 H0YIZ8 118 aa9.18□□□□□ -0.94
PHACTR4-204ENST00000493669 RHBDL1O75783 438 aa9.18□□□□□ -0.94
PHACTR4-204ENST00000493669 ZNF154Q13106 437 aa9.18□□□□□ -0.94
PHACTR4-204ENST00000493669 ZNF146Q15072 292 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms