RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 A0A1B0GUS0 222 aa10.16□□□□□ -0.78
HDAC4-210ENST00000493582 CEBPZOSA8MTT3 80 aa10.16□□□□□ -0.78
HDAC4-210ENST00000493582 ANGPTL7O43827 346 aa10.16□□□□□ -0.78
HDAC4-210ENST00000493582 APODP05090 189 aa10.16□□□□□ -0.78
HDAC4-210ENST00000493582 FAHP16930 419 aa10.16□□□□□ -0.78
HDAC4-210ENST00000493582 GAGE1Q13065 139 aa10.16□□□□□ -0.78
HDAC4-210ENST00000493582 GRINAQ7Z429 371 aa10.16□□□□□ -0.78
HDAC4-210ENST00000493582 MAML2Q8IZL2 1156 aaPredicted RBP10.16□□□□□ -0.78
HDAC4-210ENST00000493582 OR10G4Q8NGN3 311 aa10.16□□□□□ -0.78
HDAC4-210ENST00000493582 RRAGCQ9HB90 399 aa10.16□□□□□ -0.78
HDAC4-210ENST00000493582 F5P12259 2224 aa10.15□□□□□ -0.78
HDAC4-210ENST00000493582 ZNF705FA8MVS1 300 aaPredicted RBP10.15□□□□□ -0.78
HDAC4-210ENST00000493582 CA11O75493 328 aa10.15□□□□□ -0.78
HDAC4-210ENST00000493582 OPN1LWP04000 364 aa10.15□□□□□ -0.78
HDAC4-210ENST00000493582 ZNF705DP0CH99 300 aaPredicted RBP10.15□□□□□ -0.78
HDAC4-210ENST00000493582 ZNF705BP0CI00 300 aaPredicted RBP10.15□□□□□ -0.78
HDAC4-210ENST00000493582 PLA2G5P39877 138 aa10.15□□□□□ -0.78
HDAC4-210ENST00000493582 TDRG1Q3Y452 100 aa10.15□□□□□ -0.78
HDAC4-210ENST00000493582 ZNF542PQ5EBM4 170 aa10.15□□□□□ -0.78
HDAC4-210ENST00000493582 CARD17Q5XLA6 110 aa10.15□□□□□ -0.78
HDAC4-210ENST00000493582 ZNF787Q6DD87 383 aa10.15□□□□□ -0.78
HDAC4-210ENST00000493582 H1FNTQ75WM6 255 aaPredicted RBP10.15□□□□□ -0.78
HDAC4-210ENST00000493582 ZNF573Q86YE8 665 aa10.15□□□□□ -0.78
HDAC4-210ENST00000493582 OR51G1Q8NGK1 321 aa10.15□□□□□ -0.78
HDAC4-210ENST00000493582 CHST11Q9NPF2 352 aa10.15□□□□□ -0.78
HDAC4-210ENST00000493582 CISD1Q9NZ45 108 aaKnown RBP10.15□□□□□ -0.78
HDAC4-210ENST00000493582 B4E171 279 aa10.15□□□□□ -0.78
HDAC4-210ENST00000493582 ALG1L2C9J202 215 aa10.15□□□□□ -0.78
HDAC4-210ENST00000493582 H3BML4 177 aa10.15□□□□□ -0.78
HDAC4-210ENST00000493582 H3BP45 60 aa10.15□□□□□ -0.78
HDAC4-210ENST00000493582 TP53I11O14683 189 aa10.15□□□□□ -0.78
HDAC4-210ENST00000493582 HPRT1P00492 218 aa10.15□□□□□ -0.78
HDAC4-210ENST00000493582 LINC00614P0C842 121 aa10.15□□□□□ -0.78
HDAC4-210ENST00000493582 CEACAM1P13688 526 aa10.15□□□□□ -0.78
HDAC4-210ENST00000493582 TSPAN7P41732 249 aa10.15□□□□□ -0.78
HDAC4-210ENST00000493582 PDLIM4P50479 330 aa10.15□□□□□ -0.78
HDAC4-210ENST00000493582 MRPS34P82930 218 aaKnown RBP10.15□□□□□ -0.78
HDAC4-210ENST00000493582 SSX7Q7RTT5 188 aa10.15□□□□□ -0.78
HDAC4-210ENST00000493582 ZNF100Q8IYN0 542 aa10.15□□□□□ -0.78
HDAC4-210ENST00000493582 ADIPOR1Q96A54 375 aa10.15□□□□□ -0.78
HDAC4-210ENST00000493582 RSG1Q9BU20 258 aa10.15□□□□□ -0.78
HDAC4-210ENST00000493582 TM2D1Q9BX74 207 aa10.15□□□□□ -0.78
HDAC4-210ENST00000493582 CTDSP1Q9GZU7 261 aa10.15□□□□□ -0.78
HDAC4-210ENST00000493582 PLRG1O43660 514 aaKnown RBP10.14□□□□□ -0.79
HDAC4-210ENST00000493582 GALR1P47211 349 aa10.14□□□□□ -0.79
HDAC4-210ENST00000493582 HSD17B7P56937 341 aa10.14□□□□□ -0.79
HDAC4-210ENST00000493582 GABREP78334 506 aa10.14□□□□□ -0.79
HDAC4-210ENST00000493582 SLC25A24Q6NUK1 477 aa10.14□□□□□ -0.79
HDAC4-210ENST00000493582 DOK3Q7L591 496 aa10.14□□□□□ -0.79
HDAC4-210ENST00000493582 D2HGDHQ8N465 521 aa10.14□□□□□ -0.79
HDAC4-210ENST00000493582 ACY3Q96HD9 319 aa10.14□□□□□ -0.79
HDAC4-210ENST00000493582 SLC46A1Q96NT5 459 aa10.14□□□□□ -0.79
HDAC4-210ENST00000493582 PYGO2Q9BRQ0 406 aa10.14□□□□□ -0.79
HDAC4-210ENST00000493582 LPAR2Q9HBW0 351 aa10.14□□□□□ -0.79
HDAC4-210ENST00000493582 KIR2DL5BA0A0G2JN68 375 aa10.14□□□□□ -0.79
HDAC4-210ENST00000493582 KIR2DL5BA0A0G2JPC4 375 aa10.14□□□□□ -0.79
HDAC4-210ENST00000493582 FRG2CA6NGY1 282 aa10.14□□□□□ -0.79
HDAC4-210ENST00000493582 SHISA8B8ZZ34 492 aa10.14□□□□□ -0.79
HDAC4-210ENST00000493582 CELA2BP08218 269 aaPredicted RBP10.14□□□□□ -0.79
HDAC4-210ENST00000493582 ACRP10323 421 aa10.14□□□□□ -0.79
HDAC4-210ENST00000493582 TFPI2P48307 235 aa10.14□□□□□ -0.79
HDAC4-210ENST00000493582 TAS2R30P59541 319 aa10.14□□□□□ -0.79
HDAC4-210ENST00000493582 OR5I1Q13606 314 aa10.14□□□□□ -0.79
HDAC4-210ENST00000493582 TMEM31Q5JXX7 168 aa10.14□□□□□ -0.79
HDAC4-210ENST00000493582 KIR2DL5AQ8N109 375 aa10.14□□□□□ -0.79
HDAC4-210ENST00000493582 TMEM170AQ8WVE7 144 aa10.14□□□□□ -0.79
HDAC4-210ENST00000493582 SDSLQ96GA7 329 aa10.14□□□□□ -0.79
HDAC4-210ENST00000493582 LYZL4Q96KX0 146 aa10.14□□□□□ -0.79
HDAC4-210ENST00000493582 BMFQ96LC9 184 aa10.14□□□□□ -0.79
HDAC4-210ENST00000493582 SMIM7Q9BQ49 75 aa10.14□□□□□ -0.79
HDAC4-210ENST00000493582 NAGKQ9UJ70 344 aa10.14□□□□□ -0.79
HDAC4-210ENST00000493582 C3orf85A0A1B0GTC6 90 aa10.14□□□□□ -0.79
HDAC4-210ENST00000493582 ADAM20O43506 726 aa10.14□□□□□ -0.79
HDAC4-210ENST00000493582 GALR2O43603 387 aaPredicted RBP10.14□□□□□ -0.79
HDAC4-210ENST00000493582 TCF21O43680 179 aa10.14□□□□□ -0.79
HDAC4-210ENST00000493582 CHST1O43916 411 aa10.14□□□□□ -0.79
HDAC4-210ENST00000493582 CTSEP14091 401 aa10.14□□□□□ -0.79
HDAC4-210ENST00000493582 RPP30P78346 268 aaKnown RBP10.14□□□□□ -0.79
HDAC4-210ENST00000493582 PLCXD2Q0VAA5 305 aa10.14□□□□□ -0.79
HDAC4-210ENST00000493582 PDCD1Q15116 288 aa10.14□□□□□ -0.79
HDAC4-210ENST00000493582 ZNF726P1Q15940 193 aa10.14□□□□□ -0.79
HDAC4-210ENST00000493582 TMEM256Q8N2U0 113 aa10.14□□□□□ -0.79
HDAC4-210ENST00000493582 SLC37A2Q8TED4 501 aa10.14□□□□□ -0.79
HDAC4-210ENST00000493582 TBX15Q96SF7 602 aa10.14□□□□□ -0.79
HDAC4-210ENST00000493582 PLA2G3Q9NZ20 509 aa10.14□□□□□ -0.79
HDAC4-210ENST00000493582 PRSS50Q9UI38 385 aa10.14□□□□□ -0.79
HDAC4-210ENST00000493582 VDAC3Q9Y277 283 aa10.14□□□□□ -0.79
HDAC4-210ENST00000493582 ARHGAP21Q5T5U3 1957 aa10.13□□□□□ -0.79
HDAC4-210ENST00000493582 SPRY1O43609 319 aaPredicted RBP10.13□□□□□ -0.79
HDAC4-210ENST00000493582 NUPR1O60356 82 aa10.13□□□□□ -0.79
HDAC4-210ENST00000493582 LINC00271P0C7V0 271 aa10.13□□□□□ -0.79
HDAC4-210ENST00000493582 CCKARP32238 428 aa10.13□□□□□ -0.79
HDAC4-210ENST00000493582 BRS3P32247 399 aa10.13□□□□□ -0.79
HDAC4-210ENST00000493582 CALHM1Q8IU99 346 aa10.13□□□□□ -0.79
HDAC4-210ENST00000493582 H1FOOQ8IZA3 346 aaPredicted RBP10.13□□□□□ -0.79
HDAC4-210ENST00000493582 GBGT1Q8N5D6 347 aa10.13□□□□□ -0.79
HDAC4-210ENST00000493582 NAT6Q93015 286 aa10.13□□□□□ -0.79
HDAC4-210ENST00000493582 RBKSQ9H477 322 aa10.13□□□□□ -0.79
HDAC4-210ENST00000493582 MOB1AQ9H8S9 216 aa10.13□□□□□ -0.79
HDAC4-210ENST00000493582 UBE2J1Q9Y385 318 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms