RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 CLEC4MQ9H2X3 399 aaPredicted RBP11.91□□□□□ -0.5
PDZRN3-210ENST00000492909 ARFGEF3Q5TH69 2177 aa11.91□□□□□ -0.5
PDZRN3-210ENST00000492909 SPTAN1Q13813 2472 aaKnown RBP11.91□□□□□ -0.5
PDZRN3-210ENST00000492909 hCG_1807616A0A1W2PRN6 198 aa11.9□□□□□ -0.5
PDZRN3-210ENST00000492909 FAM90A10PA6NDY2 464 aa11.9□□□□□ -0.5
PDZRN3-210ENST00000492909 FAM90A18PA6NE21 464 aa11.9□□□□□ -0.5
PDZRN3-210ENST00000492909 FAM90A16PA6NEW6 464 aa11.9□□□□□ -0.5
PDZRN3-210ENST00000492909 FAM90A20PA6NIJ5 464 aa11.9□□□□□ -0.5
PDZRN3-210ENST00000492909 FAM90A8PA6NJQ4 464 aa11.9□□□□□ -0.5
PDZRN3-210ENST00000492909 FAM90A7PA6NKC0 464 aa11.9□□□□□ -0.5
PDZRN3-210ENST00000492909 FAM90A22PA8MWA6 464 aa11.9□□□□□ -0.5
PDZRN3-210ENST00000492909 FAM90A12PA8MX19 464 aa11.9□□□□□ -0.5
PDZRN3-210ENST00000492909 FAM90A5PA8MXJ8 464 aa11.9□□□□□ -0.5
PDZRN3-210ENST00000492909 FAM90A23PA8MXZ1 464 aa11.9□□□□□ -0.5
PDZRN3-210ENST00000492909 CREBL2O60519 120 aaPredicted RBP11.9□□□□□ -0.5
PDZRN3-210ENST00000492909 GSTP1P09211 210 aaKnown RBP11.9□□□□□ -0.5
PDZRN3-210ENST00000492909 GIPP09681 153 aaPredicted RBP11.9□□□□□ -0.5
PDZRN3-210ENST00000492909 FAM90A15PP0C7V4 464 aa11.9□□□□□ -0.5
PDZRN3-210ENST00000492909 FAM90A13PP0C7W8 464 aa11.9□□□□□ -0.5
PDZRN3-210ENST00000492909 FAM90A14PP0C7W9 464 aa11.9□□□□□ -0.5
PDZRN3-210ENST00000492909 FAM90A24PP0C7X0 464 aa11.9□□□□□ -0.5
PDZRN3-210ENST00000492909 PRKACAP17612 351 aa11.9□□□□□ -0.5
PDZRN3-210ENST00000492909 ANXA7P20073 488 aaKnown RBP11.9□□□□□ -0.5
PDZRN3-210ENST00000492909 GATA4P43694 442 aa11.9□□□□□ -0.5
PDZRN3-210ENST00000492909 DAZAP2Q15038 168 aaPredicted RBP11.9□□□□□ -0.5
PDZRN3-210ENST00000492909 PCGF3Q3KNV8 242 aa11.9□□□□□ -0.5
PDZRN3-210ENST00000492909 MEX3BQ6ZN04 569 aaKnown RBP11.9□□□□□ -0.5
PDZRN3-210ENST00000492909 MUC15Q8N387 334 aa11.9□□□□□ -0.5
PDZRN3-210ENST00000492909 POC1AQ8NBT0 407 aa11.9□□□□□ -0.5
PDZRN3-210ENST00000492909 ARHGAP5-AS1Q96IT6 56 aa11.9□□□□□ -0.5
PDZRN3-210ENST00000492909 DPCDQ9BVM2 203 aaPredicted RBP11.9□□□□□ -0.5
PDZRN3-210ENST00000492909 MS4A5Q9H3V2 200 aa11.9□□□□□ -0.5
PDZRN3-210ENST00000492909 FN3KRPQ9HA64 309 aa11.9□□□□□ -0.5
PDZRN3-210ENST00000492909 SCPEP1Q9HB40 452 aa11.9□□□□□ -0.5
PDZRN3-210ENST00000492909 DYNLRB1Q9NP97 96 aa11.9□□□□□ -0.5
PDZRN3-210ENST00000492909 C1orf123Q9NWV4 160 aa11.9□□□□□ -0.5
PDZRN3-210ENST00000492909 PIPOXQ9P0Z9 390 aa11.9□□□□□ -0.5
PDZRN3-210ENST00000492909 ZNF69Q9UC07 566 aa11.9□□□□□ -0.5
PDZRN3-210ENST00000492909 BAHCC1Q9P281 2608 aa11.9□□□□□ -0.5
PDZRN3-210ENST00000492909 SULT1C2O00338 296 aa11.9□□□□□ -0.51
PDZRN3-210ENST00000492909 SNAPC5O75971 98 aa11.9□□□□□ -0.51
PDZRN3-210ENST00000492909 NXPH2O95156 264 aa11.9□□□□□ -0.51
PDZRN3-210ENST00000492909 MPC2O95563 127 aa11.9□□□□□ -0.51
PDZRN3-210ENST00000492909 IFNA7P01567 189 aa11.9□□□□□ -0.51
PDZRN3-210ENST00000492909 LPLP06858 475 aa11.9□□□□□ -0.51
PDZRN3-210ENST00000492909 CD55P08174 381 aa11.9□□□□□ -0.51
PDZRN3-210ENST00000492909 MELTFP08582 738 aa11.9□□□□□ -0.51
PDZRN3-210ENST00000492909 SNU13P55769 128 aaKnown RBP11.9□□□□□ -0.51
PDZRN3-210ENST00000492909 SSBP1Q04837 148 aaKnown RBP11.9□□□□□ -0.51
PDZRN3-210ENST00000492909 MST1LQ2TV78 715 aa11.9□□□□□ -0.51
PDZRN3-210ENST00000492909 SIGIRRQ6IA17 410 aa11.9□□□□□ -0.51
PDZRN3-210ENST00000492909 SLC36A1Q7Z2H8 476 aa11.9□□□□□ -0.51
PDZRN3-210ENST00000492909 LINC00596Q86U02 117 aa11.9□□□□□ -0.51
PDZRN3-210ENST00000492909 UXS1Q8NBZ7 420 aa11.9□□□□□ -0.51
PDZRN3-210ENST00000492909 OR4C16Q8NGL9 310 aa11.9□□□□□ -0.51
PDZRN3-210ENST00000492909 FBXW5Q969U6 566 aa11.9□□□□□ -0.51
PDZRN3-210ENST00000492909 PECRQ9BY49 303 aa11.9□□□□□ -0.51
PDZRN3-210ENST00000492909 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.9□□□□□ -0.51
PDZRN3-210ENST00000492909 PLEKHJ1Q9NW61 149 aa11.9□□□□□ -0.51
PDZRN3-210ENST00000492909 MFNGO00587 321 aa11.89□□□□□ -0.51
PDZRN3-210ENST00000492909 OR7C1O76099 320 aaPredicted RBP11.89□□□□□ -0.51
PDZRN3-210ENST00000492909 TNFRSF1AP19438 455 aa11.89□□□□□ -0.51
PDZRN3-210ENST00000492909 SSTR2P30874 369 aa11.89□□□□□ -0.51
PDZRN3-210ENST00000492909 RAP2BP61225 183 aa11.89□□□□□ -0.51
PDZRN3-210ENST00000492909 TSPAN5P62079 268 aa11.89□□□□□ -0.51
PDZRN3-210ENST00000492909 CCL8P80075 99 aa11.89□□□□□ -0.51
PDZRN3-210ENST00000492909 GUCA2AQ02747 115 aa11.89□□□□□ -0.51
PDZRN3-210ENST00000492909 IL13RA2Q14627 380 aa11.89□□□□□ -0.51
PDZRN3-210ENST00000492909 RBMS2Q15434 407 aaKnown RBP11.89□□□□□ -0.51
PDZRN3-210ENST00000492909 PNLIPRP3Q17RR3 467 aa11.89□□□□□ -0.51
PDZRN3-210ENST00000492909 MPV17LQ2QL34 196 aa11.89□□□□□ -0.51
PDZRN3-210ENST00000492909 SPRNQ5BIV9 151 aa11.89□□□□□ -0.51
PDZRN3-210ENST00000492909 FAM209AQ5JX71 171 aa11.89□□□□□ -0.51
PDZRN3-210ENST00000492909 NKAPLQ5M9Q1 402 aa11.89□□□□□ -0.51
PDZRN3-210ENST00000492909 MOGAT3Q86VF5 341 aa11.89□□□□□ -0.51
PDZRN3-210ENST00000492909 OR8H3Q8N146 312 aa11.89□□□□□ -0.51
PDZRN3-210ENST00000492909 GPX8Q8TED1 209 aa11.89□□□□□ -0.51
PDZRN3-210ENST00000492909 MARVELD3Q96A59 401 aa11.89□□□□□ -0.51
PDZRN3-210ENST00000492909 SEH1LQ96EE3 360 aa11.89□□□□□ -0.51
PDZRN3-210ENST00000492909 CHIAQ9BZP6 476 aa11.89□□□□□ -0.51
PDZRN3-210ENST00000492909 IL36RNQ9UBH0 155 aa11.89□□□□□ -0.51
PDZRN3-210ENST00000492909 HSF4Q9ULV5 492 aa11.89□□□□□ -0.51
PDZRN3-210ENST00000492909 KCNK7Q9Y2U2 307 aa11.89□□□□□ -0.51
PDZRN3-210ENST00000492909 DYSFO75923 2080 aa11.88□□□□□ -0.51
PDZRN3-210ENST00000492909 SERPINE3A8MV23 424 aa11.88□□□□□ -0.51
PDZRN3-210ENST00000492909 H3BUI4 141 aa11.88□□□□□ -0.51
PDZRN3-210ENST00000492909 TPD52L2O43399 206 aaKnown RBP11.88□□□□□ -0.51
PDZRN3-210ENST00000492909 PDCD6O75340 191 aa11.88□□□□□ -0.51
PDZRN3-210ENST00000492909 OR2A4O95047 310 aa11.88□□□□□ -0.51
PDZRN3-210ENST00000492909 AKAIN1P0CW23 69 aa11.88□□□□□ -0.51
PDZRN3-210ENST00000492909 VSIG10L2P0DP72 767 aa11.88□□□□□ -0.51
PDZRN3-210ENST00000492909 C4BPBP20851 252 aa11.88□□□□□ -0.51
PDZRN3-210ENST00000492909 FUT3P21217 361 aa11.88□□□□□ -0.51
PDZRN3-210ENST00000492909 CHATP28329 748 aa11.88□□□□□ -0.51
PDZRN3-210ENST00000492909 CFHR2P36980 270 aa11.88□□□□□ -0.51
PDZRN3-210ENST00000492909 GMFBP60983 142 aa11.88□□□□□ -0.51
PDZRN3-210ENST00000492909 EXOSC2Q13868 293 aaKnown RBP11.88□□□□□ -0.51
PDZRN3-210ENST00000492909 TESK1Q15569 626 aa11.88□□□□□ -0.51
PDZRN3-210ENST00000492909 SWI5Q1ZZU3 235 aa11.88□□□□□ -0.51
PDZRN3-210ENST00000492909 CLLU1Q5K131 121 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms