RNA–Protein interactions for RNA: ENST00000492741.5

PSPC1-204, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 1,709 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-204ENST00000492741 CCL13Q99616 98 aa18.44■□□□□ 0.54
PSPC1-204ENST00000492741 CMSS1Q9BQ75 279 aaKnown RBP18.44■□□□□ 0.54
PSPC1-204ENST00000492741 CHST6Q9GZX3 395 aa18.44■□□□□ 0.54
PSPC1-204ENST00000492741 PPA2Q9H2U2 334 aa18.44■□□□□ 0.54
PSPC1-204ENST00000492741 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.44■□□□□ 0.54
PSPC1-204ENST00000492741 ABCB10Q9NRK6 738 aa18.44■□□□□ 0.54
PSPC1-204ENST00000492741 ING3Q9NXR8 418 aa18.44■□□□□ 0.54
PSPC1-204ENST00000492741 AK3Q9UIJ7 227 aa18.44■□□□□ 0.54
PSPC1-204ENST00000492741 METRNQ9UJH8 293 aa18.44■□□□□ 0.54
PSPC1-204ENST00000492741 USF3Q68DE3 2245 aa18.44■□□□□ 0.54
PSPC1-204ENST00000492741 NKX6-3A6NJ46 265 aa18.43■□□□□ 0.54
PSPC1-204ENST00000492741 GLAP06280 429 aa18.43■□□□□ 0.54
PSPC1-204ENST00000492741 LPLP06858 475 aa18.43■□□□□ 0.54
PSPC1-204ENST00000492741 LMO1P25800 156 aa18.43■□□□□ 0.54
PSPC1-204ENST00000492741 ATP5J2P56134 94 aa18.43■□□□□ 0.54
PSPC1-204ENST00000492741 TMEM33P57088 247 aa18.43■□□□□ 0.54
PSPC1-204ENST00000492741 BAK1Q16611 211 aa18.43■□□□□ 0.54
PSPC1-204ENST00000492741 AVPI1Q5T686 147 aa18.43■□□□□ 0.54
PSPC1-204ENST00000492741 TRAPPC6BQ86SZ2 158 aa18.43■□□□□ 0.54
PSPC1-204ENST00000492741 DYRK2Q92630 601 aa18.43■□□□□ 0.54
PSPC1-204ENST00000492741 ZNF665Q9H7R5 613 aa18.43■□□□□ 0.54
PSPC1-204ENST00000492741 SCPEP1Q9HB40 452 aa18.43■□□□□ 0.54
PSPC1-204ENST00000492741 ETAA1Q9NY74 926 aa18.43■□□□□ 0.54
PSPC1-204ENST00000492741 SULT1C2O00338 296 aa18.43■□□□□ 0.54
PSPC1-204ENST00000492741 PSPNO60542 156 aa18.43■□□□□ 0.54
PSPC1-204ENST00000492741 RBBP9O75884 186 aa18.43■□□□□ 0.54
PSPC1-204ENST00000492741 IGHV4-39P01824 125 aa18.43■□□□□ 0.54
PSPC1-204ENST00000492741 PPP1R35Q8TAP8 253 aa18.43■□□□□ 0.54
PSPC1-204ENST00000492741 SEBOXQ9HB31 216 aaPredicted RBP18.43■□□□□ 0.54
PSPC1-204ENST00000492741 TMEM165Q9HC07 324 aa18.43■□□□□ 0.54
PSPC1-204ENST00000492741 CHMP1AQ9HD42 196 aaPredicted RBP18.43■□□□□ 0.54
PSPC1-204ENST00000492741 AKAP6Q13023 2319 aa18.42■□□□□ 0.54
PSPC1-204ENST00000492741 TMPRSS2O15393 492 aa18.42■□□□□ 0.54
PSPC1-204ENST00000492741 GSTZ1O43708 216 aaPredicted RBP18.42■□□□□ 0.54
PSPC1-204ENST00000492741 FCER2P06734 321 aa18.42■□□□□ 0.54
PSPC1-204ENST00000492741 CSF3P09919 207 aa18.42■□□□□ 0.54
PSPC1-204ENST00000492741 MDH2P40926 338 aaKnown RBP18.42■□□□□ 0.54
PSPC1-204ENST00000492741 DCDC5Q6ZRR9 648 aa18.42■□□□□ 0.54
PSPC1-204ENST00000492741 ZNF561Q8N587 486 aa18.42■□□□□ 0.54
PSPC1-204ENST00000492741 ZNRF1Q8ND25 227 aa18.42■□□□□ 0.54
PSPC1-204ENST00000492741 BARX1Q9HBU1 254 aaPredicted RBP18.42■□□□□ 0.54
PSPC1-204ENST00000492741 IFT46Q9NQC8 304 aa18.42■□□□□ 0.54
PSPC1-204ENST00000492741 KLK11Q9UBX7 282 aa18.42■□□□□ 0.54
PSPC1-204ENST00000492741 ZNF222Q9UK12 451 aa18.42■□□□□ 0.54
PSPC1-204ENST00000492741 GCN1Q92616 2671 aaKnown RBP18.42■□□□□ 0.54
PSPC1-204ENST00000492741 NDUFA2O43678 99 aa18.41■□□□□ 0.54
PSPC1-204ENST00000492741 IL7P13232 177 aa18.41■□□□□ 0.54
PSPC1-204ENST00000492741 ATXN7L3Q14CW9 347 aaPredicted RBP18.41■□□□□ 0.54
PSPC1-204ENST00000492741 SLC36A1Q7Z2H8 476 aa18.41■□□□□ 0.54
PSPC1-204ENST00000492741 ZNF525Q8N782 197 aa18.41■□□□□ 0.54
PSPC1-204ENST00000492741 GPX8Q8TED1 209 aa18.41■□□□□ 0.54
PSPC1-204ENST00000492741 PERPQ96FX8 193 aa18.41■□□□□ 0.54
PSPC1-204ENST00000492741 SNX22Q96L94 193 aa18.41■□□□□ 0.54
PSPC1-204ENST00000492741 TMEM246Q9BRR3 403 aa18.41■□□□□ 0.54
PSPC1-204ENST00000492741 HDHD3Q9BSH5 251 aaPredicted RBP18.41■□□□□ 0.54
PSPC1-204ENST00000492741 ZNF701Q9NV72 531 aaPredicted RBP18.41■□□□□ 0.54
PSPC1-204ENST00000492741 ADAM20O43506 726 aa18.4■□□□□ 0.54
PSPC1-204ENST00000492741 CA11O75493 328 aa18.4■□□□□ 0.54
PSPC1-204ENST00000492741 UPK1BO75841 260 aa18.4■□□□□ 0.54
PSPC1-204ENST00000492741 GPR6P46095 362 aaPredicted RBP18.4■□□□□ 0.54
PSPC1-204ENST00000492741 IL13RA1P78552 427 aa18.4■□□□□ 0.54
PSPC1-204ENST00000492741 DCTN2Q13561 401 aaKnown RBP18.4■□□□□ 0.54
PSPC1-204ENST00000492741 GRK1Q15835 563 aa18.4■□□□□ 0.54
PSPC1-204ENST00000492741 ZNF788Q6ZQV5 615 aa18.4■□□□□ 0.54
PSPC1-204ENST00000492741 C17orf107Q6ZR85 190 aa18.4■□□□□ 0.54
PSPC1-204ENST00000492741 MUC20Q8N307 709 aaPredicted RBP18.4■□□□□ 0.54
PSPC1-204ENST00000492741 TMEM185AQ8NFB2 350 aa18.4■□□□□ 0.54
PSPC1-204ENST00000492741 OR4S1Q8NGB4 309 aa18.4■□□□□ 0.54
PSPC1-204ENST00000492741 SDSLQ96GA7 329 aa18.4■□□□□ 0.54
PSPC1-204ENST00000492741 MED30Q96HR3 178 aa18.4■□□□□ 0.54
PSPC1-204ENST00000492741 GAFA1Q96PS6 74 aa18.4■□□□□ 0.54
PSPC1-204ENST00000492741 DNTTIP1Q9H147 329 aa18.4■□□□□ 0.54
PSPC1-204ENST00000492741 MAB21L2Q9Y586 359 aa18.4■□□□□ 0.54
PSPC1-204ENST00000492741 TMEM82A0PJX8 343 aa18.4■□□□□ 0.54
PSPC1-204ENST00000492741 LANCL1O43813 399 aa18.4■□□□□ 0.54
PSPC1-204ENST00000492741 ORC5O43913 435 aa18.4■□□□□ 0.54
PSPC1-204ENST00000492741 SSX5O60225 188 aa18.4■□□□□ 0.54
PSPC1-204ENST00000492741 IGHV2-70P01814 119 aa18.4■□□□□ 0.54
PSPC1-204ENST00000492741 AMY2BP19961 511 aa18.4■□□□□ 0.54
PSPC1-204ENST00000492741 GDNFP39905 211 aa18.4■□□□□ 0.54
PSPC1-204ENST00000492741 CBX5P45973 191 aa18.4■□□□□ 0.54
PSPC1-204ENST00000492741 PDLIM4P50479 330 aa18.4■□□□□ 0.54
PSPC1-204ENST00000492741 ATPAF1Q5TC12 328 aaPredicted RBP18.4■□□□□ 0.54
PSPC1-204ENST00000492741 ZNF57Q68EA5 555 aaPredicted RBP18.4■□□□□ 0.54
PSPC1-204ENST00000492741 ST6GALNAC5Q9BVH7 336 aa18.4■□□□□ 0.54
PSPC1-204ENST00000492741 C12orf4Q9NQ89 552 aa18.4■□□□□ 0.54
PSPC1-204ENST00000492741 DNASE1P24855 282 aa18.39■□□□□ 0.53
PSPC1-204ENST00000492741 ACTBP60709 375 aa18.39■□□□□ 0.53
PSPC1-204ENST00000492741 ACTG1P63261 375 aa18.39■□□□□ 0.53
PSPC1-204ENST00000492741 GVQW1Q8N7I0 195 aa18.39■□□□□ 0.53
PSPC1-204ENST00000492741 FAM216BQ8N7L0 139 aa18.39■□□□□ 0.53
PSPC1-204ENST00000492741 OR5D13Q8NGL4 314 aa18.39■□□□□ 0.53
PSPC1-204ENST00000492741 SETD6Q8TBK2 473 aa18.39■□□□□ 0.53
PSPC1-204ENST00000492741 MTFP1Q9UDX5 166 aa18.39■□□□□ 0.53
PSPC1-204ENST00000492741 LINC00854A0A1B0GVQ3 168 aa18.38■□□□□ 0.53
PSPC1-204ENST00000492741 K7N7A8 449 aa18.38■□□□□ 0.53
PSPC1-204ENST00000492741 SIGLEC5O15389 551 aa18.38■□□□□ 0.53
PSPC1-204ENST00000492741 ZNF737O75373 536 aa18.38■□□□□ 0.53
PSPC1-204ENST00000492741 FSTL3O95633 263 aa18.38■□□□□ 0.53
PSPC1-204ENST00000492741 TK1P04183 234 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms