RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 ZNF430Q9H8G1 570 aaPredicted RBP8.43□□□□□ -1.06
VPS8-225ENST00000492449 IL19Q9UHD0 177 aa8.43□□□□□ -1.06
VPS8-225ENST00000492449 RBM7Q9Y580 266 aaKnown RBP8.43□□□□□ -1.06
VPS8-225ENST00000492449 OR1A2Q9Y585 309 aa8.43□□□□□ -1.06
VPS8-225ENST00000492449 TMEM56-RWDD3S4R434 201 aa8.43□□□□□ -1.06
VPS8-225ENST00000492449 DUXBA0A1W2PPF3 345 aa8.43□□□□□ -1.06
VPS8-225ENST00000492449 VSTM2BA6NLU5 285 aa8.43□□□□□ -1.06
VPS8-225ENST00000492449 AHRRA9YTQ3 701 aa8.43□□□□□ -1.06
VPS8-225ENST00000492449 IGKV1D-16P01601 117 aa8.43□□□□□ -1.06
VPS8-225ENST00000492449 FAHP16930 419 aa8.43□□□□□ -1.06
VPS8-225ENST00000492449 DYNLT3P51808 116 aa8.43□□□□□ -1.06
VPS8-225ENST00000492449 TXNDC8Q6A555 127 aa8.43□□□□□ -1.06
VPS8-225ENST00000492449 MARCH3Q86UD3 253 aa8.43□□□□□ -1.06
VPS8-225ENST00000492449 DAZLQ92904 295 aaKnown RBP8.43□□□□□ -1.06
VPS8-225ENST00000492449 NUS1Q96E22 293 aa8.43□□□□□ -1.06
VPS8-225ENST00000492449 LRRC3BQ96PB8 259 aa8.43□□□□□ -1.06
VPS8-225ENST00000492449 CENPFP49454 3210 aa8.42□□□□□ -1.06
VPS8-225ENST00000492449 IGHV2-26A0A0B4J1V2 119 aa8.42□□□□□ -1.06
VPS8-225ENST00000492449 PRSS37A4D1T9 235 aa8.42□□□□□ -1.06
VPS8-225ENST00000492449 LINC01553A4QN01 128 aa8.42□□□□□ -1.06
VPS8-225ENST00000492449 LRRC3CA6NJW4 275 aa8.42□□□□□ -1.06
VPS8-225ENST00000492449 P2RY10O00398 339 aa8.42□□□□□ -1.06
VPS8-225ENST00000492449 HS3ST1O14792 307 aa8.42□□□□□ -1.06
VPS8-225ENST00000492449 TRAPPC6AO75865 159 aa8.42□□□□□ -1.06
VPS8-225ENST00000492449 PDGFBP01127 241 aaPredicted RBP8.42□□□□□ -1.06
VPS8-225ENST00000492449 HLA-DQA2P01906 255 aa8.42□□□□□ -1.06
VPS8-225ENST00000492449 SMIM10L1P0DMW3 83 aa8.42□□□□□ -1.06
VPS8-225ENST00000492449 GPR1P46091 355 aa8.42□□□□□ -1.06
VPS8-225ENST00000492449 SUMO1P63165 101 aaKnown RBP8.42□□□□□ -1.06
VPS8-225ENST00000492449 EIF3IQ13347 325 aaKnown RBP8.42□□□□□ -1.06
VPS8-225ENST00000492449 VWA1Q6PCB0 445 aa8.42□□□□□ -1.06
VPS8-225ENST00000492449 Q6ZN92 141 aa8.42□□□□□ -1.06
VPS8-225ENST00000492449 OR4N5Q8IXE1 308 aa8.42□□□□□ -1.06
VPS8-225ENST00000492449 ZNF519Q8TB69 540 aa8.42□□□□□ -1.06
VPS8-225ENST00000492449 ARRDC3Q96B67 414 aa8.42□□□□□ -1.06
VPS8-225ENST00000492449 DNAJA3Q96EY1 480 aa8.42□□□□□ -1.06
VPS8-225ENST00000492449 SMIM10Q96HG1 83 aa8.42□□□□□ -1.06
VPS8-225ENST00000492449 HSPB9Q9BQS6 159 aa8.42□□□□□ -1.06
VPS8-225ENST00000492449 OR10A2Q9H208 303 aa8.42□□□□□ -1.06
VPS8-225ENST00000492449 C9orf172C9J069 976 aa8.42□□□□□ -1.06
VPS8-225ENST00000492449 SPINT1O43278 529 aa8.42□□□□□ -1.06
VPS8-225ENST00000492449 RUNX1Q01196 453 aa8.42□□□□□ -1.06
VPS8-225ENST00000492449 EGR4Q05215 589 aa8.42□□□□□ -1.06
VPS8-225ENST00000492449 FOXL1Q12952 345 aa8.42□□□□□ -1.06
VPS8-225ENST00000492449 TRIM61Q5EBN2 209 aa8.42□□□□□ -1.06
VPS8-225ENST00000492449 WBP2NLQ6ICG8 309 aa8.42□□□□□ -1.06
VPS8-225ENST00000492449 KLHDC1Q8N7A1 406 aa8.42□□□□□ -1.06
VPS8-225ENST00000492449 SLC38A9Q8NBW4 561 aa8.42□□□□□ -1.06
VPS8-225ENST00000492449 SSC4DQ8WTU2 575 aa8.42□□□□□ -1.06
VPS8-225ENST00000492449 SLC35D1Q9NTN3 355 aa8.42□□□□□ -1.06
VPS8-225ENST00000492449 ELOVL5Q9NYP7 299 aa8.42□□□□□ -1.06
VPS8-225ENST00000492449 PTRH2Q9Y3E5 179 aaKnown RBP8.42□□□□□ -1.06
VPS8-225ENST00000492449 A0A1B0GUS0 222 aa8.41□□□□□ -1.06
VPS8-225ENST00000492449 S100A7P31151 101 aa8.41□□□□□ -1.06
VPS8-225ENST00000492449 MRPL49Q13405 166 aaKnown RBP8.41□□□□□ -1.06
VPS8-225ENST00000492449 MSMO1Q15800 293 aa8.41□□□□□ -1.06
VPS8-225ENST00000492449 ZNF726P1Q15940 193 aa8.41□□□□□ -1.06
VPS8-225ENST00000492449 ASTLQ6HA08 431 aaPredicted RBP8.41□□□□□ -1.06
VPS8-225ENST00000492449 CFAP161Q6P656 301 aa8.41□□□□□ -1.06
VPS8-225ENST00000492449 ZNF709Q8N972 641 aa8.41□□□□□ -1.06
VPS8-225ENST00000492449 RTN4IP1Q8WWV3 396 aaPredicted RBP8.41□□□□□ -1.06
VPS8-225ENST00000492449 COX14Q96I36 57 aa8.41□□□□□ -1.06
VPS8-225ENST00000492449 TXN2Q99757 166 aa8.41□□□□□ -1.06
VPS8-225ENST00000492449 PECRQ9BY49 303 aa8.41□□□□□ -1.06
VPS8-225ENST00000492449 THAP10Q9P2Z0 257 aaPredicted RBP8.41□□□□□ -1.06
VPS8-225ENST00000492449 CLN8Q9UBY8 286 aa8.41□□□□□ -1.06
VPS8-225ENST00000492449 DAPP1Q9UN19 280 aa8.41□□□□□ -1.06
VPS8-225ENST00000492449 IGLC7A0M8Q6 106 aa8.41□□□□□ -1.06
VPS8-225ENST00000492449 CEBPZOSA8MTT3 80 aa8.41□□□□□ -1.06
VPS8-225ENST00000492449 CNOT4O95628 575 aaKnown RBP8.41□□□□□ -1.06
VPS8-225ENST00000492449 C8AP07357 584 aa8.41□□□□□ -1.06
VPS8-225ENST00000492449 SELPP16109 830 aa8.41□□□□□ -1.06
VPS8-225ENST00000492449 TSPOP30536 169 aa8.41□□□□□ -1.06
VPS8-225ENST00000492449 BIDP55957 195 aa8.41□□□□□ -1.06
VPS8-225ENST00000492449 EXOSC7Q15024 291 aaKnown RBP8.41□□□□□ -1.06
VPS8-225ENST00000492449 EXT1Q16394 746 aa8.41□□□□□ -1.06
VPS8-225ENST00000492449 REEP6Q96HR9 211 aa8.41□□□□□ -1.06
VPS8-225ENST00000492449 PSMG3Q9BT73 122 aaPredicted RBP8.41□□□□□ -1.06
VPS8-225ENST00000492449 FAM206AQ9NX38 181 aa8.41□□□□□ -1.06
VPS8-225ENST00000492449 LOC101059948A0A1B0GTJ6 334 aa8.4□□□□□ -1.06
VPS8-225ENST00000492449 SERINC4A6NH21 518 aa8.4□□□□□ -1.06
VPS8-225ENST00000492449 TTRP02766 147 aa8.4□□□□□ -1.06
VPS8-225ENST00000492449 CD33P20138 364 aa8.4□□□□□ -1.06
VPS8-225ENST00000492449 ADMP35318 185 aa8.4□□□□□ -1.06
VPS8-225ENST00000492449 VIPR2P41587 438 aa8.4□□□□□ -1.06
VPS8-225ENST00000492449 LHX2P50458 406 aa8.4□□□□□ -1.06
VPS8-225ENST00000492449 SRPXP78539 464 aa8.4□□□□□ -1.06
VPS8-225ENST00000492449 MEF2BQ02080 365 aaPredicted RBP8.4□□□□□ -1.06
VPS8-225ENST00000492449 Q0VG73 95 aa8.4□□□□□ -1.06
VPS8-225ENST00000492449 SMIM21Q3B7S5 101 aa8.4□□□□□ -1.06
VPS8-225ENST00000492449 SP6Q3SY56 376 aa8.4□□□□□ -1.06
VPS8-225ENST00000492449 PARS2Q7L3T8 475 aaKnown RBP8.4□□□□□ -1.06
VPS8-225ENST00000492449 OR5AS1Q8N127 324 aa8.4□□□□□ -1.06
VPS8-225ENST00000492449 C10orf53Q8N6V4 93 aa8.4□□□□□ -1.06
VPS8-225ENST00000492449 CLUHP3Q96NS8 147 aa8.4□□□□□ -1.06
VPS8-225ENST00000492449 MLNRO43193 412 aa8.4□□□□□ -1.06
VPS8-225ENST00000492449 IL33O95760 270 aa8.4□□□□□ -1.06
VPS8-225ENST00000492449 CSTAP01040 98 aa8.4□□□□□ -1.06
VPS8-225ENST00000492449 IGHMP01871 453 aa8.4□□□□□ -1.06
VPS8-225ENST00000492449 CT62P0C5K7 136 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms