RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 PITPNC1Q9UKF7 332 aa7.42□□□□□ -1.22
HDAC3-212ENST00000492407 TBL2Q9Y4P3 447 aaKnown RBP7.42□□□□□ -1.22
HDAC3-212ENST00000492407 WNK1Q9H4A3 2382 aa7.41□□□□□ -1.22
HDAC3-212ENST00000492407 A0A1W2PRD5 423 aa7.41□□□□□ -1.22
HDAC3-212ENST00000492407 A0A1W2PRF3 423 aa7.41□□□□□ -1.22
HDAC3-212ENST00000492407 A0A1W2PRM7 423 aa7.41□□□□□ -1.22
HDAC3-212ENST00000492407 MFSD2BA6NFX1 497 aa7.41□□□□□ -1.22
HDAC3-212ENST00000492407 J3QT63 122 aa7.41□□□□□ -1.22
HDAC3-212ENST00000492407 DLGAP1O14490 977 aa7.41□□□□□ -1.22
HDAC3-212ENST00000492407 GNGT2O14610 69 aa7.41□□□□□ -1.22
HDAC3-212ENST00000492407 TSPAN4O14817 238 aa7.41□□□□□ -1.22
HDAC3-212ENST00000492407 ANGPTL7O43827 346 aa7.41□□□□□ -1.22
HDAC3-212ENST00000492407 SELENOFO60613 162 aa7.41□□□□□ -1.22
HDAC3-212ENST00000492407 DHRS3O75911 302 aa7.41□□□□□ -1.22
HDAC3-212ENST00000492407 ZFPL1O95159 310 aa7.41□□□□□ -1.22
HDAC3-212ENST00000492407 NRASP01111 189 aa7.41□□□□□ -1.22
HDAC3-212ENST00000492407 PGA5P0DJD9 388 aa7.41□□□□□ -1.22
HDAC3-212ENST00000492407 FAHP16930 419 aa7.41□□□□□ -1.22
HDAC3-212ENST00000492407 MPZP25189 248 aa7.41□□□□□ -1.22
HDAC3-212ENST00000492407 ALDH3B2P48448 385 aa7.41□□□□□ -1.22
HDAC3-212ENST00000492407 DYNLT3P51808 116 aa7.41□□□□□ -1.22
HDAC3-212ENST00000492407 CAPZA1P52907 286 aa7.41□□□□□ -1.22
HDAC3-212ENST00000492407 PLAC9Q5JTB6 97 aa7.41□□□□□ -1.22
HDAC3-212ENST00000492407 ZNF684Q5T5D7 378 aa7.41□□□□□ -1.22
HDAC3-212ENST00000492407 TMEM42Q69YG0 159 aa7.41□□□□□ -1.22
HDAC3-212ENST00000492407 TMEM200BQ69YZ2 307 aa7.41□□□□□ -1.22
HDAC3-212ENST00000492407 HAGHLQ6PII5 290 aaPredicted RBP7.41□□□□□ -1.22
HDAC3-212ENST00000492407 Q6ZSR3 168 aa7.41□□□□□ -1.22
HDAC3-212ENST00000492407 MOB3CQ70IA8 216 aa7.41□□□□□ -1.22
HDAC3-212ENST00000492407 MKXQ8IYA7 352 aa7.41□□□□□ -1.22
HDAC3-212ENST00000492407 FAM185AQ8N0U4 392 aa7.41□□□□□ -1.22
HDAC3-212ENST00000492407 PNKDQ8N490 385 aa7.41□□□□□ -1.22
HDAC3-212ENST00000492407 IQCF1Q8N6M8 205 aa7.41□□□□□ -1.22
HDAC3-212ENST00000492407 CCDC54Q8NEL0 328 aa7.41□□□□□ -1.22
HDAC3-212ENST00000492407 OR4S1Q8NGB4 309 aa7.41□□□□□ -1.22
HDAC3-212ENST00000492407 PIFOQ8TCI5 191 aa7.41□□□□□ -1.22
HDAC3-212ENST00000492407 TRUB1Q8WWH5 349 aaKnown RBP7.41□□□□□ -1.22
HDAC3-212ENST00000492407 OR8B4Q96RC9 309 aa7.41□□□□□ -1.22
HDAC3-212ENST00000492407 TEAD3Q99594 435 aa7.41□□□□□ -1.22
HDAC3-212ENST00000492407 ZNF184Q99676 751 aaPredicted RBP7.41□□□□□ -1.22
HDAC3-212ENST00000492407 NRIP2Q9BQI9 281 aa7.41□□□□□ -1.22
HDAC3-212ENST00000492407 RIBC2Q9H4K1 309 aa7.41□□□□□ -1.22
HDAC3-212ENST00000492407 HES4Q9HCC6 221 aa7.41□□□□□ -1.22
HDAC3-212ENST00000492407 PCDHB16Q9NRJ7 776 aa7.41□□□□□ -1.22
HDAC3-212ENST00000492407 RFPL4AA6NLU0 287 aa7.4□□□□□ -1.22
HDAC3-212ENST00000492407 C17orf98A8MV24 154 aa7.4□□□□□ -1.22
HDAC3-212ENST00000492407 LOC110117498-PIK3R3F6TDL0 507 aa7.4□□□□□ -1.22
HDAC3-212ENST00000492407 RFPL4AL1F8VTS6 287 aa7.4□□□□□ -1.22
HDAC3-212ENST00000492407 NUPL2O15504 423 aaKnown RBP7.4□□□□□ -1.22
HDAC3-212ENST00000492407 TK1P04183 234 aa7.4□□□□□ -1.22
HDAC3-212ENST00000492407 ALDOBP05062 364 aa7.4□□□□□ -1.22
HDAC3-212ENST00000492407 S100A8P05109 93 aa7.4□□□□□ -1.22
HDAC3-212ENST00000492407 CRYGCP07315 174 aa7.4□□□□□ -1.22
HDAC3-212ENST00000492407 CEBPGP53567 150 aa7.4□□□□□ -1.22
HDAC3-212ENST00000492407 DLX1P56177 255 aa7.4□□□□□ -1.22
HDAC3-212ENST00000492407 RPS7P62081 194 aaKnown RBP7.4□□□□□ -1.22
HDAC3-212ENST00000492407 OXA1LQ15070 435 aa7.4□□□□□ -1.22
HDAC3-212ENST00000492407 PLCXD3Q63HM9 321 aa7.4□□□□□ -1.22
HDAC3-212ENST00000492407 CD177Q8N6Q3 437 aa7.4□□□□□ -1.22
HDAC3-212ENST00000492407 KLHDC1Q8N7A1 406 aa7.4□□□□□ -1.22
HDAC3-212ENST00000492407 OR4F17Q8NGA8 305 aa7.4□□□□□ -1.22
HDAC3-212ENST00000492407 OR11H6Q8NGC7 330 aa7.4□□□□□ -1.22
HDAC3-212ENST00000492407 OR13D1Q8NGV5 346 aa7.4□□□□□ -1.22
HDAC3-212ENST00000492407 OR2T27Q8NH04 317 aa7.4□□□□□ -1.22
HDAC3-212ENST00000492407 OR51E1Q8TCB6 317 aa7.4□□□□□ -1.22
HDAC3-212ENST00000492407 DPF1Q92782 380 aa7.4□□□□□ -1.22
HDAC3-212ENST00000492407 OR4F4Q96R69 305 aa7.4□□□□□ -1.22
HDAC3-212ENST00000492407 CITED4Q96RK1 184 aa7.4□□□□□ -1.22
HDAC3-212ENST00000492407 PRRG3Q9BZD7 231 aa7.4□□□□□ -1.22
HDAC3-212ENST00000492407 PKIBQ9C010 78 aa7.4□□□□□ -1.22
HDAC3-212ENST00000492407 GPR84Q9NQS5 396 aa7.4□□□□□ -1.22
HDAC3-212ENST00000492407 PIGLQ9Y2B2 252 aa7.4□□□□□ -1.22
HDAC3-212ENST00000492407 KLHDC2Q9Y2U9 406 aa7.4□□□□□ -1.22
HDAC3-212ENST00000492407 NUBP2Q9Y5Y2 271 aa7.4□□□□□ -1.22
HDAC3-212ENST00000492407 V9GYS6 101 aa7.4□□□□□ -1.22
HDAC3-212ENST00000492407 CCDC160A6NGH7 325 aa7.39□□□□□ -1.23
HDAC3-212ENST00000492407 K7N7A8 449 aa7.39□□□□□ -1.23
HDAC3-212ENST00000492407 CDK1P06493 297 aa7.39□□□□□ -1.23
HDAC3-212ENST00000492407 FCER2P06734 321 aa7.39□□□□□ -1.23
HDAC3-212ENST00000492407 CHRM2P08172 466 aa7.39□□□□□ -1.23
HDAC3-212ENST00000492407 CD1BP29016 333 aa7.39□□□□□ -1.23
HDAC3-212ENST00000492407 ERVK11-1P61568 191 aa7.39□□□□□ -1.23
HDAC3-212ENST00000492407 ESRRGP62508 458 aa7.39□□□□□ -1.23
HDAC3-212ENST00000492407 PRB3Q04118 309 aaPredicted RBP7.39□□□□□ -1.23
HDAC3-212ENST00000492407 MEF2CQ06413 473 aaPredicted RBP7.39□□□□□ -1.23
HDAC3-212ENST00000492407 APOFQ13790 326 aa7.39□□□□□ -1.23
HDAC3-212ENST00000492407 SNAPC1Q16533 368 aa7.39□□□□□ -1.23
HDAC3-212ENST00000492407 LY6EQ16553 131 aa7.39□□□□□ -1.23
HDAC3-212ENST00000492407 ZBTB49Q6ZSB9 765 aa7.39□□□□□ -1.23
HDAC3-212ENST00000492407 LHFPL2Q6ZUX7 228 aa7.39□□□□□ -1.23
HDAC3-212ENST00000492407 TMEM179BQ7Z7N9 219 aa7.39□□□□□ -1.23
HDAC3-212ENST00000492407 COMMD2Q86X83 199 aa7.39□□□□□ -1.23
HDAC3-212ENST00000492407 NDUFA11Q86Y39 141 aa7.39□□□□□ -1.23
HDAC3-212ENST00000492407 C1QL4Q86Z23 238 aa7.39□□□□□ -1.23
HDAC3-212ENST00000492407 Q8NFD4 153 aa7.39□□□□□ -1.23
HDAC3-212ENST00000492407 RPS4Y2Q8TD47 263 aa7.39□□□□□ -1.23
HDAC3-212ENST00000492407 CD300LFQ8TDQ1 290 aa7.39□□□□□ -1.23
HDAC3-212ENST00000492407 WIPF2Q8TF74 440 aaPredicted RBP7.39□□□□□ -1.23
HDAC3-212ENST00000492407 THRSPQ92748 146 aa7.39□□□□□ -1.23
HDAC3-212ENST00000492407 RORBQ92753 470 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms