RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 A0A0G2JK05 382 aa12.24□□□□□ -0.45
USP39-217ENST00000491659 SLC33A1O00400 549 aaPredicted RBP12.24□□□□□ -0.45
USP39-217ENST00000491659 XPNPEP2O43895 674 aa12.24□□□□□ -0.45
USP39-217ENST00000491659 ALDOBP05062 364 aa12.24□□□□□ -0.45
USP39-217ENST00000491659 CSN2P05814 226 aa12.24□□□□□ -0.45
USP39-217ENST00000491659 IL13RA2Q14627 380 aa12.24□□□□□ -0.45
USP39-217ENST00000491659 ATXN7L3Q14CW9 347 aaPredicted RBP12.24□□□□□ -0.45
USP39-217ENST00000491659 YIF1BQ5BJH7 314 aa12.24□□□□□ -0.45
USP39-217ENST00000491659 DMKNQ6E0U4 476 aaPredicted RBP12.24□□□□□ -0.45
USP39-217ENST00000491659 ELP2Q6IA86 826 aa12.24□□□□□ -0.45
USP39-217ENST00000491659 ASPHD2Q6ICH7 369 aa12.24□□□□□ -0.45
USP39-217ENST00000491659 Q6P435 159 aa12.24□□□□□ -0.45
USP39-217ENST00000491659 LIAT1Q6ZQX7 453 aa12.24□□□□□ -0.45
USP39-217ENST00000491659 ZFP41Q8N8Y5 198 aa12.24□□□□□ -0.45
USP39-217ENST00000491659 OR13C5Q8NGS8 318 aa12.24□□□□□ -0.45
USP39-217ENST00000491659 GHSRQ92847 366 aa12.24□□□□□ -0.45
USP39-217ENST00000491659 NR1H4Q96RI1 486 aaPredicted RBP12.24□□□□□ -0.45
USP39-217ENST00000491659 S100A13Q99584 98 aa12.24□□□□□ -0.45
USP39-217ENST00000491659 TMEM133Q9H2Q1 129 aa12.24□□□□□ -0.45
USP39-217ENST00000491659 C16orf95Q9H693 158 aa12.24□□□□□ -0.45
USP39-217ENST00000491659 TMEM138Q9NPI0 162 aa12.24□□□□□ -0.45
USP39-217ENST00000491659 ABCB10Q9NRK6 738 aa12.24□□□□□ -0.45
USP39-217ENST00000491659 PSORS1C1Q9UIG5 152 aa12.24□□□□□ -0.45
USP39-217ENST00000491659 IGHV2-26A0A0B4J1V2 119 aa12.23□□□□□ -0.45
USP39-217ENST00000491659 TRBV5-5A0A0J9YX44 114 aa12.23□□□□□ -0.45
USP39-217ENST00000491659 ODAMA1E959 279 aa12.23□□□□□ -0.45
USP39-217ENST00000491659 FAM90A8PA6NJQ4 464 aa12.23□□□□□ -0.45
USP39-217ENST00000491659 H0YJX3 145 aa12.23□□□□□ -0.45
USP39-217ENST00000491659 TSPAN9O75954 239 aa12.23□□□□□ -0.45
USP39-217ENST00000491659 PAX6P26367 422 aa12.23□□□□□ -0.45
USP39-217ENST00000491659 BDKRB2P30411 391 aa12.23□□□□□ -0.45
USP39-217ENST00000491659 ZNF93P35789 620 aaPredicted RBP12.23□□□□□ -0.45
USP39-217ENST00000491659 PTGFRP43088 359 aa12.23□□□□□ -0.45
USP39-217ENST00000491659 SLC34A1Q06495 639 aa12.23□□□□□ -0.45
USP39-217ENST00000491659 AESQ08117 197 aa12.23□□□□□ -0.45
USP39-217ENST00000491659 FAM189A2Q15884 450 aa12.23□□□□□ -0.45
USP39-217ENST00000491659 Q499Y3 187 aa12.23□□□□□ -0.45
USP39-217ENST00000491659 PLA1AQ53H76 456 aa12.23□□□□□ -0.45
USP39-217ENST00000491659 KRBOX4Q5JUW0 171 aa12.23□□□□□ -0.45
USP39-217ENST00000491659 OR52W1Q6IF63 320 aa12.23□□□□□ -0.45
USP39-217ENST00000491659 BPIFB6Q8NFQ5 453 aa12.23□□□□□ -0.45
USP39-217ENST00000491659 OR10K1Q8NGX5 313 aa12.23□□□□□ -0.45
USP39-217ENST00000491659 FBLIM1Q8WUP2 373 aa12.23□□□□□ -0.45
USP39-217ENST00000491659 MALSU1Q96EH3 234 aa12.23□□□□□ -0.45
USP39-217ENST00000491659 CLEC7AQ9BXN2 247 aa12.23□□□□□ -0.45
USP39-217ENST00000491659 PLCXD1Q9NUJ7 323 aa12.23□□□□□ -0.45
USP39-217ENST00000491659 ING3Q9NXR8 418 aa12.23□□□□□ -0.45
USP39-217ENST00000491659 TAS2R3Q9NYW6 316 aa12.23□□□□□ -0.45
USP39-217ENST00000491659 VGLL3A8MV65 326 aa12.22□□□□□ -0.45
USP39-217ENST00000491659 HSPB6O14558 160 aa12.22□□□□□ -0.45
USP39-217ENST00000491659 HTR3BO95264 441 aa12.22□□□□□ -0.45
USP39-217ENST00000491659 OR3A4PP47883 348 aa12.22□□□□□ -0.45
USP39-217ENST00000491659 GLIPR1P48060 266 aa12.22□□□□□ -0.45
USP39-217ENST00000491659 WNT4P56705 351 aa12.22□□□□□ -0.45
USP39-217ENST00000491659 SSX2Q16385 188 aa12.22□□□□□ -0.45
USP39-217ENST00000491659 PAN3Q58A45 887 aaKnown RBP12.22□□□□□ -0.45
USP39-217ENST00000491659 MINOS1Q5TGZ0 78 aa12.22□□□□□ -0.45
USP39-217ENST00000491659 PRAMEF5Q5TYX0 476 aa12.22□□□□□ -0.45
USP39-217ENST00000491659 LAIR2Q6ISS4 152 aa12.22□□□□□ -0.45
USP39-217ENST00000491659 ZNF485Q8NCK3 441 aa12.22□□□□□ -0.45
USP39-217ENST00000491659 OR51T1Q8NGJ9 327 aa12.22□□□□□ -0.45
USP39-217ENST00000491659 OR4C13Q8NGP0 309 aa12.22□□□□□ -0.45
USP39-217ENST00000491659 NDNFQ8TB73 568 aa12.22□□□□□ -0.45
USP39-217ENST00000491659 TFAP2CQ92754 450 aa12.22□□□□□ -0.45
USP39-217ENST00000491659 CORO2AQ92828 525 aa12.22□□□□□ -0.45
USP39-217ENST00000491659 PGLYRP3Q96LB9 341 aa12.22□□□□□ -0.45
USP39-217ENST00000491659 METTL9Q9H1A3 318 aa12.22□□□□□ -0.45
USP39-217ENST00000491659 PAK1IP1Q9NWT1 392 aaPredicted RBP12.22□□□□□ -0.45
USP39-217ENST00000491659 OR6C3Q9NZP0 311 aa12.22□□□□□ -0.45
USP39-217ENST00000491659 MINOS1-NBL1R4GNA1 71 aa12.22□□□□□ -0.45
USP39-217ENST00000491659 PNMA8CA0A1B0GUJ8 204 aa12.21□□□□□ -0.45
USP39-217ENST00000491659 CSTBP04080 98 aaKnown RBP12.21□□□□□ -0.45
USP39-217ENST00000491659 FSTP19883 344 aa12.21□□□□□ -0.45
USP39-217ENST00000491659 CDK2P24941 298 aa12.21□□□□□ -0.45
USP39-217ENST00000491659 C21orf33P30042 268 aaPredicted RBP12.21□□□□□ -0.45
USP39-217ENST00000491659 GABRA5P31644 462 aa12.21□□□□□ -0.45
USP39-217ENST00000491659 PROK1P58294 105 aa12.21□□□□□ -0.45
USP39-217ENST00000491659 SRSF4Q08170 494 aaKnown RBP12.21□□□□□ -0.45
USP39-217ENST00000491659 HEPN1Q6WQI6 88 aa12.21□□□□□ -0.45
USP39-217ENST00000491659 DYNAPQ8N1N2 210 aa12.21□□□□□ -0.45
USP39-217ENST00000491659 OR4D6Q8NGJ1 314 aa12.21□□□□□ -0.45
USP39-217ENST00000491659 THRSPQ92748 146 aa12.21□□□□□ -0.45
USP39-217ENST00000491659 ORAI1Q96D31 301 aa12.21□□□□□ -0.45
USP39-217ENST00000491659 COQ2Q96H96 371 aa12.21□□□□□ -0.45
USP39-217ENST00000491659 OR14A2Q96R54 314 aa12.21□□□□□ -0.45
USP39-217ENST00000491659 ZNF184Q99676 751 aaPredicted RBP12.21□□□□□ -0.45
USP39-217ENST00000491659 NKX3-1Q99801 234 aaPredicted RBP12.21□□□□□ -0.45
USP39-217ENST00000491659 CITED1Q99966 193 aa12.21□□□□□ -0.45
USP39-217ENST00000491659 NPFFR1Q9GZQ6 430 aa12.21□□□□□ -0.45
USP39-217ENST00000491659 PPIL3Q9H2H8 161 aaKnown RBP12.21□□□□□ -0.45
USP39-217ENST00000491659 RANBP3Q9H6Z4 567 aaPredicted RBP12.21□□□□□ -0.45
USP39-217ENST00000491659 IL36GQ9NZH8 169 aa12.21□□□□□ -0.45
USP39-217ENST00000491659 NKX1-2Q9UD57 310 aaPredicted RBP12.21□□□□□ -0.45
USP39-217ENST00000491659 ING4Q9UNL4 249 aa12.21□□□□□ -0.45
USP39-217ENST00000491659 TCF19Q9Y242 345 aa12.21□□□□□ -0.45
USP39-217ENST00000491659 ERGIC3Q9Y282 383 aa12.21□□□□□ -0.45
USP39-217ENST00000491659 ZNF729A6NN14 1252 aaPredicted RBP12.2□□□□□ -0.46
USP39-217ENST00000491659 F2RL2O00254 374 aa12.2□□□□□ -0.46
USP39-217ENST00000491659 TIMM23O14925 209 aa12.2□□□□□ -0.46
USP39-217ENST00000491659 ZNF780AO75290 641 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms