RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 RAB1CQ92928 201 aa18.15■□□□□ 0.5
VCPKMT-204ENST00000491402 GCDHQ92947 438 aaPredicted RBP18.15■□□□□ 0.5
VCPKMT-204ENST00000491402 SULT4A1Q9BR01 284 aa18.15■□□□□ 0.5
VCPKMT-204ENST00000491402 TMEM246Q9BRR3 403 aa18.15■□□□□ 0.5
VCPKMT-204ENST00000491402 FAAP24Q9BTP7 215 aa18.15■□□□□ 0.5
VCPKMT-204ENST00000491402 DPCDQ9BVM2 203 aaPredicted RBP18.15■□□□□ 0.5
VCPKMT-204ENST00000491402 AUNIPQ9H7T9 357 aa18.15■□□□□ 0.5
VCPKMT-204ENST00000491402 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.15■□□□□ 0.5
VCPKMT-204ENST00000491402 RABL2AQ9UBK7 228 aaPredicted RBP18.15■□□□□ 0.5
VCPKMT-204ENST00000491402 ITGB1BP2Q9UKP3 347 aa18.15■□□□□ 0.5
VCPKMT-204ENST00000491402 RABL2BQ9UNT1 228 aa18.15■□□□□ 0.5
VCPKMT-204ENST00000491402 PRRC2AP48634 2157 aaKnown RBP18.15■□□□□ 0.5
VCPKMT-204ENST00000491402 ISPDA4D126 451 aa18.14■□□□□ 0.5
VCPKMT-204ENST00000491402 GSTP1P09211 210 aaKnown RBP18.14■□□□□ 0.5
VCPKMT-204ENST00000491402 PTBP1P26599 531 aaKnown RBP eCLIP18.14■□□□□ 0.5
VCPKMT-204ENST00000491402 ARL6IP1Q15041 203 aa18.14■□□□□ 0.5
VCPKMT-204ENST00000491402 PAN3Q58A45 887 aaKnown RBP18.14■□□□□ 0.5
VCPKMT-204ENST00000491402 ATPAF1Q5TC12 328 aaPredicted RBP18.14■□□□□ 0.5
VCPKMT-204ENST00000491402 ZNF788Q6ZQV5 615 aa18.14■□□□□ 0.5
VCPKMT-204ENST00000491402 LRRC75A-AS1Q8N1F1 130 aa18.14■□□□□ 0.5
VCPKMT-204ENST00000491402 BPIFB2Q8N4F0 458 aa18.14■□□□□ 0.5
VCPKMT-204ENST00000491402 SDSLQ96GA7 329 aa18.14■□□□□ 0.5
VCPKMT-204ENST00000491402 CCL13Q99616 98 aa18.14■□□□□ 0.5
VCPKMT-204ENST00000491402 DNTTIP1Q9H147 329 aa18.14■□□□□ 0.5
VCPKMT-204ENST00000491402 VPS13CQ709C8 3753 aa18.14■□□□□ 0.49
VCPKMT-204ENST00000491402 SERPINE3A8MV23 424 aa18.14■□□□□ 0.49
VCPKMT-204ENST00000491402 TNFRSF13BO14836 293 aaPredicted RBP18.14■□□□□ 0.49
VCPKMT-204ENST00000491402 ZNF737O75373 536 aa18.14■□□□□ 0.49
VCPKMT-204ENST00000491402 PITPNAQ00169 270 aa18.14■□□□□ 0.49
VCPKMT-204ENST00000491402 C17orf107Q6ZR85 190 aa18.14■□□□□ 0.49
VCPKMT-204ENST00000491402 ZNF561Q8N587 486 aa18.14■□□□□ 0.49
VCPKMT-204ENST00000491402 ASCC1Q8N9N2 400 aaKnown RBP18.14■□□□□ 0.49
VCPKMT-204ENST00000491402 ZNRF1Q8ND25 227 aa18.14■□□□□ 0.49
VCPKMT-204ENST00000491402 GAFA1Q96PS6 74 aa18.14■□□□□ 0.49
VCPKMT-204ENST00000491402 WDR12Q9GZL7 423 aaKnown RBP18.14■□□□□ 0.49
VCPKMT-204ENST00000491402 CHST6Q9GZX3 395 aa18.14■□□□□ 0.49
VCPKMT-204ENST00000491402 PPA2Q9H2U2 334 aa18.14■□□□□ 0.49
VCPKMT-204ENST00000491402 ZNF665Q9H7R5 613 aa18.14■□□□□ 0.49
VCPKMT-204ENST00000491402 MAB21L2Q9Y586 359 aa18.14■□□□□ 0.49
VCPKMT-204ENST00000491402 A0A1B0GW55 424 aa18.13■□□□□ 0.49
VCPKMT-204ENST00000491402 MCRIP1C9JLW8 97 aa18.13■□□□□ 0.49
VCPKMT-204ENST00000491402 TMPRSS2O15393 492 aa18.13■□□□□ 0.49
VCPKMT-204ENST00000491402 MELTFP08582 738 aa18.13■□□□□ 0.49
VCPKMT-204ENST00000491402 DUX4L2P0CJ85 424 aa18.13■□□□□ 0.49
VCPKMT-204ENST00000491402 DUX4L3P0CJ86 424 aa18.13■□□□□ 0.49
VCPKMT-204ENST00000491402 DUX4L4P0CJ87 422 aa18.13■□□□□ 0.49
VCPKMT-204ENST00000491402 DUX4L5P0CJ88 424 aa18.13■□□□□ 0.49
VCPKMT-204ENST00000491402 DUX4L6P0CJ89 424 aa18.13■□□□□ 0.49
VCPKMT-204ENST00000491402 DUX4L7P0CJ90 424 aa18.13■□□□□ 0.49
VCPKMT-204ENST00000491402 GPR6P46095 362 aaPredicted RBP18.13■□□□□ 0.49
VCPKMT-204ENST00000491402 PDLIM4P50479 330 aa18.13■□□□□ 0.49
VCPKMT-204ENST00000491402 DUX4L9Q6RFH8 374 aaPredicted RBP18.13■□□□□ 0.49
VCPKMT-204ENST00000491402 DCDC5Q6ZRR9 648 aa18.13■□□□□ 0.49
VCPKMT-204ENST00000491402 MUC20Q8N307 709 aaPredicted RBP18.13■□□□□ 0.49
VCPKMT-204ENST00000491402 C15orf40Q8WUR7 153 aa18.13■□□□□ 0.49
VCPKMT-204ENST00000491402 SRRQ9GZT4 340 aa18.13■□□□□ 0.49
VCPKMT-204ENST00000491402 DUX4Q9UBX2 424 aa18.13■□□□□ 0.49
VCPKMT-204ENST00000491402 TMEM82A0PJX8 343 aa18.12■□□□□ 0.49
VCPKMT-204ENST00000491402 UBE2QL1A1L167 161 aa18.12■□□□□ 0.49
VCPKMT-204ENST00000491402 NKX6-3A6NJ46 265 aa18.12■□□□□ 0.49
VCPKMT-204ENST00000491402 NDUFA2O43678 99 aa18.12■□□□□ 0.49
VCPKMT-204ENST00000491402 GLAP06280 429 aa18.12■□□□□ 0.49
VCPKMT-204ENST00000491402 GIFP27352 417 aa18.12■□□□□ 0.49
VCPKMT-204ENST00000491402 ZNF846Q147U1 533 aa18.12■□□□□ 0.49
VCPKMT-204ENST00000491402 PYDC2Q56P42 97 aa18.12■□□□□ 0.49
VCPKMT-204ENST00000491402 HACD4Q5VWC8 232 aa18.12■□□□□ 0.49
VCPKMT-204ENST00000491402 FAM216BQ8N7L0 139 aa18.12■□□□□ 0.49
VCPKMT-204ENST00000491402 NEK7Q8TDX7 302 aa18.12■□□□□ 0.49
VCPKMT-204ENST00000491402 DYRK2Q92630 601 aa18.12■□□□□ 0.49
VCPKMT-204ENST00000491402 SHARPINQ9H0F6 387 aa18.12■□□□□ 0.49
VCPKMT-204ENST00000491402 SIGLEC5O15389 551 aa18.12■□□□□ 0.49
VCPKMT-204ENST00000491402 SELLP14151 372 aa18.12■□□□□ 0.49
VCPKMT-204ENST00000491402 OR3A1P47881 315 aa18.12■□□□□ 0.49
VCPKMT-204ENST00000491402 IL13RA1P78552 427 aa18.12■□□□□ 0.49
VCPKMT-204ENST00000491402 RBM39Q14498 530 aaKnown RBP18.12■□□□□ 0.49
VCPKMT-204ENST00000491402 TMEM155Q4W5P6 130 aa18.12■□□□□ 0.49
VCPKMT-204ENST00000491402 LYPD2Q6UXB3 125 aa18.12■□□□□ 0.49
VCPKMT-204ENST00000491402 FAM168AQ92567 244 aa18.12■□□□□ 0.49
VCPKMT-204ENST00000491402 FOXC2Q99958 501 aa18.12■□□□□ 0.49
VCPKMT-204ENST00000491402 AK3Q9UIJ7 227 aa18.12■□□□□ 0.49
VCPKMT-204ENST00000491402 MEIOCA2RUB1 952 aa18.11■□□□□ 0.49
VCPKMT-204ENST00000491402 CTDSPLO15194 276 aa18.11■□□□□ 0.49
VCPKMT-204ENST00000491402 CSF3P09919 207 aa18.11■□□□□ 0.49
VCPKMT-204ENST00000491402 PRSS3P35030 304 aa18.11■□□□□ 0.49
VCPKMT-204ENST00000491402 ATXN7L3Q14CW9 347 aaPredicted RBP18.11■□□□□ 0.49
VCPKMT-204ENST00000491402 PNLIPRP3Q17RR3 467 aa18.11■□□□□ 0.49
VCPKMT-204ENST00000491402 CLEC2AQ6UVW9 174 aa18.11■□□□□ 0.49
VCPKMT-204ENST00000491402 SLC36A1Q7Z2H8 476 aa18.11■□□□□ 0.49
VCPKMT-204ENST00000491402 OR4S1Q8NGB4 309 aa18.11■□□□□ 0.49
VCPKMT-204ENST00000491402 NUDCD2Q8WVJ2 157 aa18.11■□□□□ 0.49
VCPKMT-204ENST00000491402 SNX22Q96L94 193 aa18.11■□□□□ 0.49
VCPKMT-204ENST00000491402 BPESC1Q9GZL8 116 aa18.11■□□□□ 0.49
VCPKMT-204ENST00000491402 KAAG1Q9UBP8 84 aa18.11■□□□□ 0.49
VCPKMT-204ENST00000491402 CREBBPQ92793 2442 aa18.1■□□□□ 0.49
VCPKMT-204ENST00000491402 CEACAM18A8MTB9 384 aa18.1■□□□□ 0.49
VCPKMT-204ENST00000491402 K7N7A8 449 aa18.1■□□□□ 0.49
VCPKMT-204ENST00000491402 ADAM20O43506 726 aa18.1■□□□□ 0.49
VCPKMT-204ENST00000491402 GNG2P59768 71 aa18.1■□□□□ 0.49
VCPKMT-204ENST00000491402 GUCA2AQ02747 115 aa18.1■□□□□ 0.49
VCPKMT-204ENST00000491402 ARFRP1Q13795 201 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms