RNA–Protein interactions for RNA: ENST00000491360.1

ABCB1-208, Transcript of ATP binding cassette subfamily B member 1, human

TSL 2

Gene ABCB1, Length 539 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCB1-208	ENST00000491360	PRO1933	Q9H354	126 aa		4.17	□□□□□ -1.74
ABCB1-208	ENST00000491360	TCEAL2	Q9H3H9	227 aa	Predicted RBP	4.17	□□□□□ -1.74
ABCB1-208	ENST00000491360	FAM60A	Q9NP50	221 aa		4.17	□□□□□ -1.74
ABCB1-208	ENST00000491360	CHST11	Q9NPF2	352 aa		4.17	□□□□□ -1.74
ABCB1-208	ENST00000491360	GPR84	Q9NQS5	396 aa		4.17	□□□□□ -1.74
ABCB1-208	ENST00000491360	PNO1	Q9NRX1	252 aa	Known RBP	4.17	□□□□□ -1.74
ABCB1-208	ENST00000491360	DECR2	Q9NUI1	292 aa		4.17	□□□□□ -1.74
ABCB1-208	ENST00000491360	ZNF701	Q9NV72	531 aa	Predicted RBP	4.17	□□□□□ -1.74
ABCB1-208	ENST00000491360	NECAP2	Q9NVZ3	263 aa		4.17	□□□□□ -1.74
ABCB1-208	ENST00000491360	KLHL13	Q9P2N7	655 aa		4.17	□□□□□ -1.74
ABCB1-208	ENST00000491360	AK3	Q9UIJ7	227 aa		4.17	□□□□□ -1.74
ABCB1-208	ENST00000491360	PITPNC1	Q9UKF7	332 aa		4.17	□□□□□ -1.74
ABCB1-208	ENST00000491360	POLR1D	Q9Y2S0	133 aa		4.17	□□□□□ -1.74
ABCB1-208	ENST00000491360	HS3ST3B1	Q9Y662	390 aa		4.17	□□□□□ -1.74
ABCB1-208	ENST00000491360	MTCH2	Q9Y6C9	303 aa		4.17	□□□□□ -1.74
ABCB1-208	ENST00000491360	TGIF2-C20orf24	A0A0A6YYL0	155 aa		4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	IGKV1D-43	A0A0B4J1Z2	117 aa		4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	LOC102723971	A0A1B0GUV8	181 aa		4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360		A0A1B0GWJ7	208 aa		4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360		A0A1W2PNV4	684 aa		4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360		A0A1W2PP11	408 aa		4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	ZNF732	B4DXR9	585 aa		4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360		C9J4A7	227 aa		4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360		H0YL77	283 aa		4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	TCAP	O15273	167 aa		4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	DIRAS3	O95661	229 aa		4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	TRGC2	P03986	189 aa		4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	OR5AC1	P0C628	307 aa		4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	ZNF728	P0DKX0	622 aa		4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	TMEM225B	P0DP42	221 aa		4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	FABP4	P15090	132 aa		4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	MYOG	P15173	224 aa		4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	ZNF43	P17038	809 aa		4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	KLK2	P20151	261 aa		4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	RAB4A	P20338	218 aa		4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	IL11	P20809	199 aa		4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	DTYMK	P23919	212 aa		4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	ATP6V0C	P27449	155 aa		4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	AKT2	P31751	481 aa		4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	IL2RG	P31785	369 aa		4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	CSNK1A1	P48729	337 aa		4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	NOVA1	P51513	510 aa	Known RBP	4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	RND2	P52198	227 aa		4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	BID	P55957	195 aa		4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	PIGP	P57054	158 aa		4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	ZNF121	P58317	390 aa	Predicted RBP	4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	NUTF2	P61970	127 aa	Known RBP	4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	PPP1CA	P62136	330 aa		4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	YPEL5	P62699	121 aa		4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	GRB2	P62993	217 aa	Known RBP	4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	SRPX	P78539	464 aa		4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	HLA-DRB3	P79483	266 aa		4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	H3F3A	P84243	136 aa		4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	HSF1	Q00613	529 aa		4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	NHLH2	Q02577	135 aa		4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	POU3F1	Q03052	451 aa	Predicted RBP	4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	PNRC1	Q12796	327 aa	Predicted RBP	4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	FZD2	Q14332	565 aa		4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	HNF4G	Q14541	408 aa		4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	JOSD1	Q15040	202 aa	Predicted RBP	4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	TAF9	Q16594	264 aa		4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	HAGH	Q16775	308 aa		4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	TMEM176B	Q3YBM2	270 aa	Predicted RBP	4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	PDZD11	Q5EBL8	140 aa		4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	THEM4	Q5T1C6	240 aa		4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	GFI1B	Q5VTD9	330 aa		4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	SP5	Q6BEB4	398 aa	Predicted RBP	4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	ZNF343	Q6P1L6	599 aa		4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	C9orf40	Q8IXQ3	194 aa		4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	ZNF283	Q8N7M2	679 aa		4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	ZNF321P	Q8N8H1	164 aa		4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	C9orf106	Q8NAJ2	232 aa		4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	OR4D5	Q8NGN0	318 aa		4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	OR6X1	Q8NH79	312 aa		4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	RNASEH2C	Q8TDP1	164 aa	Known RBP	4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	SLC37A2	Q8TED4	501 aa		4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	ZNF721	Q8TF20	911 aa		4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	PTPMT1	Q8WUK0	201 aa	Predicted RBP	4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	PATE1	Q8WXA2	126 aa		4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	LINC00476	Q8WZB0	136 aa		4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	ST8SIA1	Q92185	356 aa		4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	FRZB	Q92765	325 aa		4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	GNPNAT1	Q96EK6	184 aa	Predicted RBP	4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	BOD1	Q96IK1	185 aa		4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	FAM71F1	Q96KD3	344 aa	Predicted RBP	4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	FAM210B	Q96KR6	192 aa		4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	PACRG	Q96M98	296 aa	Predicted RBP	4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	JSRP1	Q96MG2	331 aa	Predicted RBP	4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	RBM14	Q96PK6	669 aa	Known RBP	4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	NEU1	Q99519	415 aa		4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	SPIN2A	Q99865	258 aa		4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	SPIN2B	Q9BPZ2	258 aa		4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	ACTR3C	Q9C0K3	210 aa	Predicted RBP	4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	OR8D2	Q9GZM6	311 aa		4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	ZNF700	Q9H0M5	742 aa		4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	PLEKHF2	Q9H8W4	249 aa		4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	CERS4	Q9HA82	394 aa		4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	TMEM242	Q9NWH2	141 aa		4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	ALKBH4	Q9NXW9	302 aa		4.16	□□□□□ -1.74
ABCB1-208	ENST00000491360	RNF7	Q9UBF6	113 aa		4.16	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms