RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 TDGF1P13385 188 aa6.36□□□□□ -1.39
NPHP3-208ENST00000490993 CRYGSP22914 178 aa6.36□□□□□ -1.39
NPHP3-208ENST00000490993 ZP1P60852 638 aa6.36□□□□□ -1.39
NPHP3-208ENST00000490993 HLA-DRB3P79483 266 aa6.36□□□□□ -1.39
NPHP3-208ENST00000490993 NAAAQ02083 359 aa6.36□□□□□ -1.39
NPHP3-208ENST00000490993 EDDM3AQ14507 147 aa6.36□□□□□ -1.39
NPHP3-208ENST00000490993 CLINT1Q14677 625 aa6.36□□□□□ -1.39
NPHP3-208ENST00000490993 DCAF12L2Q5VW00 463 aa6.36□□□□□ -1.39
NPHP3-208ENST00000490993 BRICD5Q6PL45 260 aa6.36□□□□□ -1.39
NPHP3-208ENST00000490993 HSD17B11Q8NBQ5 300 aa6.36□□□□□ -1.39
NPHP3-208ENST00000490993 OR2G3Q8NGZ4 309 aa6.36□□□□□ -1.39
NPHP3-208ENST00000490993 FAM213BQ8TBF2 198 aa6.36□□□□□ -1.39
NPHP3-208ENST00000490993 SLC25A40Q8TBP6 338 aa6.36□□□□□ -1.39
NPHP3-208ENST00000490993 HIPK2Q9H2X6 1198 aa6.36□□□□□ -1.39
NPHP3-208ENST00000490993 PNRC2Q9NPJ4 139 aaKnown RBP6.36□□□□□ -1.39
NPHP3-208ENST00000490993 SLC2A9Q9NRM0 540 aa6.36□□□□□ -1.39
NPHP3-208ENST00000490993 ZNF629Q9UEG4 869 aaPredicted RBP6.36□□□□□ -1.39
NPHP3-208ENST00000490993 SH3BGRL2Q9UJC5 107 aa6.36□□□□□ -1.39
NPHP3-208ENST00000490993 A0A1W2PR80 420 aa6.35□□□□□ -1.39
NPHP3-208ENST00000490993 SSSCA1O60232 199 aa6.35□□□□□ -1.39
NPHP3-208ENST00000490993 MT-CO2P00403 227 aa6.35□□□□□ -1.39
NPHP3-208ENST00000490993 NAT1P18440 290 aa6.35□□□□□ -1.39
NPHP3-208ENST00000490993 GPR12P47775 334 aa6.35□□□□□ -1.39
NPHP3-208ENST00000490993 UCP3P55916 312 aa6.35□□□□□ -1.39
NPHP3-208ENST00000490993 GFRA1P56159 465 aa6.35□□□□□ -1.39
NPHP3-208ENST00000490993 PRSS12P56730 875 aa6.35□□□□□ -1.39
NPHP3-208ENST00000490993 B3GALT5-AS1P59052 145 aa6.35□□□□□ -1.39
NPHP3-208ENST00000490993 RAB5BP61020 215 aa6.35□□□□□ -1.39
NPHP3-208ENST00000490993 SP6Q3SY56 376 aa6.35□□□□□ -1.39
NPHP3-208ENST00000490993 PLAC9Q5JTB6 97 aa6.35□□□□□ -1.39
NPHP3-208ENST00000490993 GFRALQ6UXV0 394 aa6.35□□□□□ -1.39
NPHP3-208ENST00000490993 ZBTB34Q8NCN2 500 aa6.35□□□□□ -1.39
NPHP3-208ENST00000490993 SHARPINQ9H0F6 387 aa6.35□□□□□ -1.39
NPHP3-208ENST00000490993 ERRFI1Q9UJM3 462 aaPredicted RBP6.35□□□□□ -1.39
NPHP3-208ENST00000490993 KPTNQ9Y664 436 aa6.35□□□□□ -1.39
NPHP3-208ENST00000490993 TRIOBPQ9H2D6 2365 aa6.35□□□□□ -1.39
NPHP3-208ENST00000490993 UMAD1C9J7I0 102 aa6.35□□□□□ -1.39
NPHP3-208ENST00000490993 KLK2P20151 261 aa6.35□□□□□ -1.39
NPHP3-208ENST00000490993 AKR1D1P51857 326 aa6.35□□□□□ -1.39
NPHP3-208ENST00000490993 UCP2P55851 309 aa6.35□□□□□ -1.39
NPHP3-208ENST00000490993 KLF3P57682 345 aaPredicted RBP6.35□□□□□ -1.39
NPHP3-208ENST00000490993 OR11H4Q8NGC9 324 aa6.35□□□□□ -1.39
NPHP3-208ENST00000490993 SAT2Q96F10 170 aaPredicted RBP6.35□□□□□ -1.39
NPHP3-208ENST00000490993 LYZL4Q96KX0 146 aa6.35□□□□□ -1.39
NPHP3-208ENST00000490993 RAB40CQ96S21 281 aa6.35□□□□□ -1.39
NPHP3-208ENST00000490993 KCNIP2Q9NS61 270 aa6.35□□□□□ -1.39
NPHP3-208ENST00000490993 SNRNP200O75643 2136 aaKnown RBP6.35□□□□□ -1.39
NPHP3-208ENST00000490993 CELA3AP09093 270 aa6.35□□□□□ -1.39
NPHP3-208ENST00000490993 TNFRSF1AP19438 455 aa6.35□□□□□ -1.39
NPHP3-208ENST00000490993 TGIF1Q15583 401 aa6.35□□□□□ -1.39
NPHP3-208ENST00000490993 OR2Z1Q8NG97 314 aa6.35□□□□□ -1.39
NPHP3-208ENST00000490993 OR5D13Q8NGL4 314 aa6.35□□□□□ -1.39
NPHP3-208ENST00000490993 ZNF524Q96C55 264 aa6.35□□□□□ -1.39
NPHP3-208ENST00000490993 MMP26Q9NRE1 261 aa6.35□□□□□ -1.39
NPHP3-208ENST00000490993 ARID1BQ8NFD5 2236 aaPredicted RBP6.35□□□□□ -1.39
NPHP3-208ENST00000490993 OOEPA6NGQ2 149 aa6.35□□□□□ -1.39
NPHP3-208ENST00000490993 HAND1O96004 215 aa6.35□□□□□ -1.39
NPHP3-208ENST00000490993 CEACAM6P40199 344 aa6.35□□□□□ -1.39
NPHP3-208ENST00000490993 TNFSF10P50591 281 aa6.35□□□□□ -1.39
NPHP3-208ENST00000490993 H2BFSP57053 126 aa6.35□□□□□ -1.39
NPHP3-208ENST00000490993 RAB11AP62491 216 aa6.35□□□□□ -1.39
NPHP3-208ENST00000490993 BTN1A1Q13410 526 aa6.35□□□□□ -1.39
NPHP3-208ENST00000490993 C1orf185Q5T7R7 199 aa6.35□□□□□ -1.39
NPHP3-208ENST00000490993 RBMS3Q6XE24 437 aaKnown RBP6.35□□□□□ -1.39
NPHP3-208ENST00000490993 TBC1D26Q86UD7 250 aa6.35□□□□□ -1.39
NPHP3-208ENST00000490993 PAQR4Q8N4S7 273 aaPredicted RBP6.35□□□□□ -1.39
NPHP3-208ENST00000490993 C1orf162Q8NEQ5 155 aaPredicted RBP6.35□□□□□ -1.39
NPHP3-208ENST00000490993 MOB3AQ96BX8 217 aa6.35□□□□□ -1.39
NPHP3-208ENST00000490993 OR2W1Q9Y3N9 320 aa6.35□□□□□ -1.39
NPHP3-208ENST00000490993 ATP23Q9Y6H3 246 aa6.35□□□□□ -1.39
NPHP3-208ENST00000490993 A0A1W2PPH5 198 aa6.34□□□□□ -1.39
NPHP3-208ENST00000490993 CRYM-AS1A6NIL9 109 aa6.34□□□□□ -1.39
NPHP3-208ENST00000490993 TNFSF12O43508 249 aa6.34□□□□□ -1.39
NPHP3-208ENST00000490993 GLI4P10075 376 aa6.34□□□□□ -1.39
NPHP3-208ENST00000490993 EDN3P14138 238 aa6.34□□□□□ -1.39
NPHP3-208ENST00000490993 CSRP1P21291 193 aaKnown RBP6.34□□□□□ -1.39
NPHP3-208ENST00000490993 ZNF83P51522 516 aa6.34□□□□□ -1.39
NPHP3-208ENST00000490993 FOXC1Q12948 553 aa6.34□□□□□ -1.39
NPHP3-208ENST00000490993 SHEQ5VZ18 495 aa6.34□□□□□ -1.39
NPHP3-208ENST00000490993 ASPHD2Q6ICH7 369 aa6.34□□□□□ -1.39
NPHP3-208ENST00000490993 SEZ6L2Q6UXD5 910 aa6.34□□□□□ -1.39
NPHP3-208ENST00000490993 WDYHV1Q96HA8 205 aa6.34□□□□□ -1.39
NPHP3-208ENST00000490993 HDHD3Q9BSH5 251 aaPredicted RBP6.34□□□□□ -1.39
NPHP3-208ENST00000490993 REPIN1Q9BWE0 567 aaKnown RBP6.34□□□□□ -1.39
NPHP3-208ENST00000490993 C5orf66Q9H5L9 145 aa6.34□□□□□ -1.39
NPHP3-208ENST00000490993 SH2D2AQ9NP31 389 aa6.34□□□□□ -1.39
NPHP3-208ENST00000490993 OSGIN2Q9Y236 505 aa6.34□□□□□ -1.39
NPHP3-208ENST00000490993 BTBD17A6NE02 478 aa6.34□□□□□ -1.39
NPHP3-208ENST00000490993 VDAC1P21796 283 aa6.34□□□□□ -1.39
NPHP3-208ENST00000490993 IL3RAP26951 378 aa6.34□□□□□ -1.39
NPHP3-208ENST00000490993 CD200P41217 278 aa6.34□□□□□ -1.39
NPHP3-208ENST00000490993 IL24Q13007 206 aa6.34□□□□□ -1.39
NPHP3-208ENST00000490993 KRBOX4Q5JUW0 171 aa6.34□□□□□ -1.39
NPHP3-208ENST00000490993 FAM74A1Q5RGS3 127 aa6.34□□□□□ -1.39
NPHP3-208ENST00000490993 NSUN5P2Q63ZY6 315 aa6.34□□□□□ -1.39
NPHP3-208ENST00000490993 TMEM108Q6UXF1 575 aa6.34□□□□□ -1.39
NPHP3-208ENST00000490993 Q6ZRG5 221 aa6.34□□□□□ -1.39
NPHP3-208ENST00000490993 TMEM217Q8N7C4 229 aa6.34□□□□□ -1.39
NPHP3-208ENST00000490993 OR5P3Q8WZ94 311 aa6.34□□□□□ -1.39
NPHP3-208ENST00000490993 MSI2Q96DH6 328 aaKnown RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms