RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 RTBDNQ9BSG5 229 aaPredicted RBP11.24□□□□□ -0.61
SHOX2-205ENST00000490689 RSG1Q9BU20 258 aa11.24□□□□□ -0.61
SHOX2-205ENST00000490689 TMEM100Q9NV29 134 aa11.24□□□□□ -0.61
SHOX2-205ENST00000490689 PIGBOS1A0A0B4J2F0 54 aa11.24□□□□□ -0.61
SHOX2-205ENST00000490689 C5orf52A6NGY3 159 aa11.24□□□□□ -0.61
SHOX2-205ENST00000490689 SIRPB1O00241 398 aa11.24□□□□□ -0.61
SHOX2-205ENST00000490689 ZNF737O75373 536 aa11.24□□□□□ -0.61
SHOX2-205ENST00000490689 ISG15P05161 165 aa11.24□□□□□ -0.61
SHOX2-205ENST00000490689 PHOSPHO2Q8TCD6 241 aa11.24□□□□□ -0.61
SHOX2-205ENST00000490689 ABHD14AQ9BUJ0 271 aa11.24□□□□□ -0.61
SHOX2-205ENST00000490689 ZDHHC11Q9H8X9 412 aa11.24□□□□□ -0.61
SHOX2-205ENST00000490689 CCL28Q9NRJ3 127 aa11.24□□□□□ -0.61
SHOX2-205ENST00000490689 RALGAPA1Q6GYQ0 2036 aa11.24□□□□□ -0.61
SHOX2-205ENST00000490689 C5orf49A4QMS7 147 aa11.24□□□□□ -0.61
SHOX2-205ENST00000490689 C9JQL5 133 aa11.24□□□□□ -0.61
SHOX2-205ENST00000490689 PDCD6O75340 191 aa11.24□□□□□ -0.61
SHOX2-205ENST00000490689 KITLGP21583 273 aa11.24□□□□□ -0.61
SHOX2-205ENST00000490689 IZUMO4Q1ZYL8 232 aa11.24□□□□□ -0.61
SHOX2-205ENST00000490689 CEACAM16Q2WEN9 425 aa11.24□□□□□ -0.61
SHOX2-205ENST00000490689 RNF144BQ7Z419 303 aa11.24□□□□□ -0.61
SHOX2-205ENST00000490689 PAQR4Q8N4S7 273 aaPredicted RBP11.24□□□□□ -0.61
SHOX2-205ENST00000490689 TMEM252Q8N6L7 170 aa11.24□□□□□ -0.61
SHOX2-205ENST00000490689 OR1K1Q8NGR3 316 aa11.24□□□□□ -0.61
SHOX2-205ENST00000490689 MVB12AQ96EY5 273 aa11.24□□□□□ -0.61
SHOX2-205ENST00000490689 MS4A10Q96PG2 267 aa11.24□□□□□ -0.61
SHOX2-205ENST00000490689 CACNA1GO43497 2377 aa11.23□□□□□ -0.61
SHOX2-205ENST00000490689 DOCK8Q8NF50 2099 aa11.23□□□□□ -0.61
SHOX2-205ENST00000490689 TRAV34A0A0B4J273 112 aa11.23□□□□□ -0.61
SHOX2-205ENST00000490689 DEGS1O15121 323 aa11.23□□□□□ -0.61
SHOX2-205ENST00000490689 ZNF32P17041 273 aa11.23□□□□□ -0.61
SHOX2-205ENST00000490689 KRTDAPP60985 99 aa11.23□□□□□ -0.61
SHOX2-205ENST00000490689 RPS23P62266 143 aaKnown RBP11.23□□□□□ -0.61
SHOX2-205ENST00000490689 ZNF90Q03938 601 aa11.23□□□□□ -0.61
SHOX2-205ENST00000490689 BSXQ3C1V8 233 aa11.23□□□□□ -0.61
SHOX2-205ENST00000490689 SPINK9Q5DT21 86 aa11.23□□□□□ -0.61
SHOX2-205ENST00000490689 DMBX1Q8NFW5 382 aa11.23□□□□□ -0.61
SHOX2-205ENST00000490689 ZNF721Q8TF20 911 aa11.23□□□□□ -0.61
SHOX2-205ENST00000490689 TMEM230Q96A57 120 aa11.23□□□□□ -0.61
SHOX2-205ENST00000490689 VOPP1Q96AW1 172 aa11.23□□□□□ -0.61
SHOX2-205ENST00000490689 SPSB1Q96BD6 273 aa11.23□□□□□ -0.61
SHOX2-205ENST00000490689 CYTL1Q9NRR1 136 aa11.23□□□□□ -0.61
SHOX2-205ENST00000490689 SLC7A10Q9NS82 523 aa11.23□□□□□ -0.61
SHOX2-205ENST00000490689 ZDHHC8Q9ULC8 765 aa11.23□□□□□ -0.61
SHOX2-205ENST00000490689 NOSIPQ9Y314 301 aaKnown RBP11.23□□□□□ -0.61
SHOX2-205ENST00000490689 LHFPL6Q9Y693 200 aa11.23□□□□□ -0.61
SHOX2-205ENST00000490689 TCF20Q9UGU0 1960 aaKnown RBP11.23□□□□□ -0.61
SHOX2-205ENST00000490689 ELOA3CA0A087WX78 387 aaPredicted RBP11.23□□□□□ -0.61
SHOX2-205ENST00000490689 ZNF729A6NN14 1252 aaPredicted RBP11.23□□□□□ -0.61
SHOX2-205ENST00000490689 F8VVB4 439 aa11.23□□□□□ -0.61
SHOX2-205ENST00000490689 F8VWA3 439 aa11.23□□□□□ -0.61
SHOX2-205ENST00000490689 FCARP24071 287 aa11.23□□□□□ -0.61
SHOX2-205ENST00000490689 APLNRP35414 380 aa11.23□□□□□ -0.61
SHOX2-205ENST00000490689 HEYLQ9NQ87 328 aaPredicted RBP11.23□□□□□ -0.61
SHOX2-205ENST00000490689 SPTBN2O15020 2390 aa11.23□□□□□ -0.61
SHOX2-205ENST00000490689 KIAA2026Q5HYC2 2103 aa11.23□□□□□ -0.61
SHOX2-205ENST00000490689 PLAURQ03405 335 aa11.23□□□□□ -0.61
SHOX2-205ENST00000490689 IQCJQ1A5X6 159 aa11.23□□□□□ -0.61
SHOX2-205ENST00000490689 SYT13Q7L8C5 426 aa11.23□□□□□ -0.61
SHOX2-205ENST00000490689 BTF3L4Q96K17 158 aa11.23□□□□□ -0.61
SHOX2-205ENST00000490689 UCN2Q96RP3 112 aa11.23□□□□□ -0.61
SHOX2-205ENST00000490689 KCNK17Q96T54 332 aa11.23□□□□□ -0.61
SHOX2-205ENST00000490689 ATG101Q9BSB4 218 aa11.23□□□□□ -0.61
SHOX2-205ENST00000490689 NXPH2O95156 264 aa11.22□□□□□ -0.61
SHOX2-205ENST00000490689 PGA3P0DJD8 388 aa11.22□□□□□ -0.61
SHOX2-205ENST00000490689 BTNL8Q6UX41 500 aa11.22□□□□□ -0.61
SHOX2-205ENST00000490689 PARD6AQ9NPB6 346 aa11.22□□□□□ -0.61
SHOX2-205ENST00000490689 KIAA1456Q9P272 454 aa11.22□□□□□ -0.61
SHOX2-205ENST00000490689 WNT16Q9UBV4 365 aa11.22□□□□□ -0.61
SHOX2-205ENST00000490689 TRAPPC1Q9Y5R8 145 aa11.22□□□□□ -0.61
SHOX2-205ENST00000490689 OPN1MWP04001 364 aa11.22□□□□□ -0.61
SHOX2-205ENST00000490689 GRPP07492 148 aa11.22□□□□□ -0.61
SHOX2-205ENST00000490689 OPN1MW2P0DN77 364 aa11.22□□□□□ -0.61
SHOX2-205ENST00000490689 OPN1MW3P0DN78 364 aa11.22□□□□□ -0.61
SHOX2-205ENST00000490689 SSR4P51571 173 aa11.22□□□□□ -0.61
SHOX2-205ENST00000490689 ZNF92Q03936 586 aa11.22□□□□□ -0.61
SHOX2-205ENST00000490689 ZNF816Q0VGE8 651 aaPredicted RBP11.22□□□□□ -0.61
SHOX2-205ENST00000490689 FAM78BQ5VT40 261 aa11.22□□□□□ -0.61
SHOX2-205ENST00000490689 GFI1BQ5VTD9 330 aa11.22□□□□□ -0.61
SHOX2-205ENST00000490689 OR1F12Q8NHA8 337 aa11.22□□□□□ -0.61
SHOX2-205ENST00000490689 PRSS50Q9UI38 385 aa11.22□□□□□ -0.61
SHOX2-205ENST00000490689 TIMM10BQ9Y5J6 103 aa11.22□□□□□ -0.61
SHOX2-205ENST00000490689 RFNGQ9Y644 331 aa11.22□□□□□ -0.61
SHOX2-205ENST00000490689 ZNF732B4DXR9 585 aa11.22□□□□□ -0.61
SHOX2-205ENST00000490689 CST2P09228 141 aa11.22□□□□□ -0.61
SHOX2-205ENST00000490689 FHL1Q13642 323 aa11.22□□□□□ -0.61
SHOX2-205ENST00000490689 RPS19BP1Q86WX3 136 aaKnown RBP11.22□□□□□ -0.61
SHOX2-205ENST00000490689 SLC22A18ASQ8N1D0 253 aa11.22□□□□□ -0.61
SHOX2-205ENST00000490689 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.21□□□□□ -0.61
SHOX2-205ENST00000490689 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.21□□□□□ -0.61
SHOX2-205ENST00000490689 UBE2CO00762 179 aa11.21□□□□□ -0.61
SHOX2-205ENST00000490689 VAMP5O95183 116 aa11.21□□□□□ -0.61
SHOX2-205ENST00000490689 POU2F2P09086 479 aa11.21□□□□□ -0.61
SHOX2-205ENST00000490689 HOXB1P14653 301 aaPredicted RBP11.21□□□□□ -0.61
SHOX2-205ENST00000490689 KHDC3LQ587J8 217 aa11.21□□□□□ -0.61
SHOX2-205ENST00000490689 TGIF2LXQ8IUE1 241 aa11.21□□□□□ -0.61
SHOX2-205ENST00000490689 BARX1Q9HBU1 254 aaPredicted RBP11.21□□□□□ -0.61
SHOX2-205ENST00000490689 HDGFL3Q9Y3E1 203 aa11.21□□□□□ -0.61
SHOX2-205ENST00000490689 R4GN57 208 aa11.21□□□□□ -0.61
SHOX2-205ENST00000490689 CASP6P55212 293 aa11.21□□□□□ -0.61
SHOX2-205ENST00000490689 OR8G1Q15617 311 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms