RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 EGLN3Q9H6Z9 239 aa7.03□□□□□ -1.28
SSBP1-212ENST00000489378 IFT22Q9H7X7 185 aa7.03□□□□□ -1.28
SSBP1-212ENST00000489378 NIPAL2Q9H841 368 aa7.03□□□□□ -1.28
SSBP1-212ENST00000489378 PCDHB16Q9NRJ7 776 aa7.03□□□□□ -1.28
SSBP1-212ENST00000489378 LIN7CQ9NUP9 197 aaKnown RBP7.03□□□□□ -1.28
SSBP1-212ENST00000489378 SLC7A11Q9UPY5 501 aa7.03□□□□□ -1.28
SSBP1-212ENST00000489378 VSIG4Q9Y279 399 aa7.03□□□□□ -1.28
SSBP1-212ENST00000489378 PIGLQ9Y2B2 252 aa7.03□□□□□ -1.28
SSBP1-212ENST00000489378 HSPG2P98160 4391 aa7.02□□□□□ -1.28
SSBP1-212ENST00000489378 A0A087X0M5 115 aa7.02□□□□□ -1.29
SSBP1-212ENST00000489378 A0A1B0GX30 115 aa7.02□□□□□ -1.29
SSBP1-212ENST00000489378 HAND1O96004 215 aa7.02□□□□□ -1.29
SSBP1-212ENST00000489378 NRASP01111 189 aa7.02□□□□□ -1.29
SSBP1-212ENST00000489378 IGHV3-7P01780 117 aa7.02□□□□□ -1.29
SSBP1-212ENST00000489378 RIPPLY1Q0D2K3 151 aa7.02□□□□□ -1.29
SSBP1-212ENST00000489378 PMS2P11Q13670 270 aa7.02□□□□□ -1.29
SSBP1-212ENST00000489378 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.02□□□□□ -1.29
SSBP1-212ENST00000489378 DHRS1Q96LJ7 313 aa7.02□□□□□ -1.29
SSBP1-212ENST00000489378 OR4C12Q96R67 309 aa7.02□□□□□ -1.29
SSBP1-212ENST00000489378 INTS14Q96SY0 518 aa7.02□□□□□ -1.29
SSBP1-212ENST00000489378 WDR12Q9GZL7 423 aaKnown RBP7.02□□□□□ -1.29
SSBP1-212ENST00000489378 TUBA4BQ9H853 241 aa7.02□□□□□ -1.29
SSBP1-212ENST00000489378 GPR173Q9NS66 373 aa7.02□□□□□ -1.29
SSBP1-212ENST00000489378 NKIRAS1Q9NYS0 192 aa7.02□□□□□ -1.29
SSBP1-212ENST00000489378 TAS2R1Q9NYW7 299 aa7.02□□□□□ -1.29
SSBP1-212ENST00000489378 MTCH1Q9NZJ7 389 aa7.02□□□□□ -1.29
SSBP1-212ENST00000489378 ACTR3BQ9P1U1 418 aa7.02□□□□□ -1.29
SSBP1-212ENST00000489378 DNAJB9Q9UBS3 223 aa7.02□□□□□ -1.29
SSBP1-212ENST00000489378 RAB21Q9UL25 225 aa7.02□□□□□ -1.29
SSBP1-212ENST00000489378 FAM32AQ9Y421 112 aaKnown RBP7.02□□□□□ -1.29
SSBP1-212ENST00000489378 U3KQV3 271 aa7.02□□□□□ -1.29
SSBP1-212ENST00000489378 TRGV10A0A0A0MS01 117 aa7.01□□□□□ -1.29
SSBP1-212ENST00000489378 IGHV3-72A0A0B4J1Y9 119 aa7.01□□□□□ -1.29
SSBP1-212ENST00000489378 CXorf65A6NEN9 183 aa7.01□□□□□ -1.29
SSBP1-212ENST00000489378 LINC01619G3V211 115 aa7.01□□□□□ -1.29
SSBP1-212ENST00000489378 CXCR6O00574 342 aa7.01□□□□□ -1.29
SSBP1-212ENST00000489378 MGST3O14880 152 aa7.01□□□□□ -1.29
SSBP1-212ENST00000489378 IGLV1-51P01701 117 aa7.01□□□□□ -1.29
SSBP1-212ENST00000489378 DUSP1P28562 367 aa7.01□□□□□ -1.29
SSBP1-212ENST00000489378 ERP29P30040 261 aaKnown RBP7.01□□□□□ -1.29
SSBP1-212ENST00000489378 KIR3DL2P43630 455 aa7.01□□□□□ -1.29
SSBP1-212ENST00000489378 OR3A1P47881 315 aa7.01□□□□□ -1.29
SSBP1-212ENST00000489378 GSSP48637 474 aa7.01□□□□□ -1.29
SSBP1-212ENST00000489378 ZP1P60852 638 aa7.01□□□□□ -1.29
SSBP1-212ENST00000489378 IL24Q13007 206 aa7.01□□□□□ -1.29
SSBP1-212ENST00000489378 KPNB1Q14974 876 aaKnown RBP7.01□□□□□ -1.29
SSBP1-212ENST00000489378 COMMD2Q86X83 199 aa7.01□□□□□ -1.29
SSBP1-212ENST00000489378 Q8N6K4 173 aa7.01□□□□□ -1.29
SSBP1-212ENST00000489378 RNF148Q8N7C7 305 aa7.01□□□□□ -1.29
SSBP1-212ENST00000489378 OR8D4Q8NGM9 314 aa7.01□□□□□ -1.29
SSBP1-212ENST00000489378 OR9G1Q8NH87 305 aa7.01□□□□□ -1.29
SSBP1-212ENST00000489378 LEAP2Q969E1 77 aa7.01□□□□□ -1.29
SSBP1-212ENST00000489378 CEP19Q96LK0 163 aa7.01□□□□□ -1.29
SSBP1-212ENST00000489378 OR51J1Q9H342 316 aa7.01□□□□□ -1.29
SSBP1-212ENST00000489378 GPR84Q9NQS5 396 aa7.01□□□□□ -1.29
SSBP1-212ENST00000489378 PLSCR3Q9NRY6 295 aa7.01□□□□□ -1.29
SSBP1-212ENST00000489378 DCAF13Q9NV06 445 aaKnown RBP7.01□□□□□ -1.29
SSBP1-212ENST00000489378 RABL2AQ9UBK7 228 aaPredicted RBP7.01□□□□□ -1.29
SSBP1-212ENST00000489378 ENPP5Q9UJA9 477 aa7.01□□□□□ -1.29
SSBP1-212ENST00000489378 KLHDC2Q9Y2U9 406 aa7.01□□□□□ -1.29
SSBP1-212ENST00000489378 CEPT1Q9Y6K0 416 aa7.01□□□□□ -1.29
SSBP1-212ENST00000489378 DNAH17Q9UFH2 4485 aa7.01□□□□□ -1.29
SSBP1-212ENST00000489378 IGHV4OR15-8A0A075B7B6 117 aa7.01□□□□□ -1.29
SSBP1-212ENST00000489378 A0A087WW49 117 aa7.01□□□□□ -1.29
SSBP1-212ENST00000489378 A0A0U1RQV5 110 aa7.01□□□□□ -1.29
SSBP1-212ENST00000489378 FAM183AA6NL82 134 aa7.01□□□□□ -1.29
SSBP1-212ENST00000489378 MRASO14807 208 aa7.01□□□□□ -1.29
SSBP1-212ENST00000489378 TPPPO94811 219 aa7.01□□□□□ -1.29
SSBP1-212ENST00000489378 ATP6V1B1P15313 513 aa7.01□□□□□ -1.29
SSBP1-212ENST00000489378 H2AFXP16104 143 aaPredicted RBP7.01□□□□□ -1.29
SSBP1-212ENST00000489378 NFYBP25208 207 aa7.01□□□□□ -1.29
SSBP1-212ENST00000489378 GLIPR1P48060 266 aa7.01□□□□□ -1.29
SSBP1-212ENST00000489378 PITPNAQ00169 270 aa7.01□□□□□ -1.29
SSBP1-212ENST00000489378 EBI3Q14213 229 aa7.01□□□□□ -1.29
SSBP1-212ENST00000489378 SLX4IPQ5VYV7 408 aa7.01□□□□□ -1.29
SSBP1-212ENST00000489378 TMEM42Q69YG0 159 aa7.01□□□□□ -1.29
SSBP1-212ENST00000489378 WDR93Q6P2C0 686 aa7.01□□□□□ -1.29
SSBP1-212ENST00000489378 TMEM65Q6PI78 240 aa7.01□□□□□ -1.29
SSBP1-212ENST00000489378 LINC00322Q6ZN03 302 aaPredicted RBP7.01□□□□□ -1.29
SSBP1-212ENST00000489378 OR8H3Q8N146 312 aa7.01□□□□□ -1.29
SSBP1-212ENST00000489378 OR51E1Q8TCB6 317 aa7.01□□□□□ -1.29
SSBP1-212ENST00000489378 CORO2AQ92828 525 aa7.01□□□□□ -1.29
SSBP1-212ENST00000489378 SLAMF9Q96A28 289 aa7.01□□□□□ -1.29
SSBP1-212ENST00000489378 C7orf34Q96L11 122 aa7.01□□□□□ -1.29
SSBP1-212ENST00000489378 TEAD3Q99594 435 aa7.01□□□□□ -1.29
SSBP1-212ENST00000489378 CADM1Q9BY67 442 aaKnown RBP7.01□□□□□ -1.29
SSBP1-212ENST00000489378 PKIBQ9C010 78 aa7.01□□□□□ -1.29
SSBP1-212ENST00000489378 MED20Q9H944 212 aa7.01□□□□□ -1.29
SSBP1-212ENST00000489378 CMTM6Q9NX76 183 aa7.01□□□□□ -1.29
SSBP1-212ENST00000489378 TAS2R3Q9NYW6 316 aa7.01□□□□□ -1.29
SSBP1-212ENST00000489378 WSB1Q9Y6I7 421 aa7.01□□□□□ -1.29
SSBP1-212ENST00000489378 CDH10Q9Y6N8 788 aa7.01□□□□□ -1.29
SSBP1-212ENST00000489378 NUPR2A6NF83 97 aa7□□□□□ -1.29
SSBP1-212ENST00000489378 A6NIN4 97 aa7□□□□□ -1.29
SSBP1-212ENST00000489378 G3V318 75 aa7□□□□□ -1.29
SSBP1-212ENST00000489378 J3QR06 171 aa7□□□□□ -1.29
SSBP1-212ENST00000489378 TMEM127O75204 238 aa7□□□□□ -1.29
SSBP1-212ENST00000489378 IGLV3-1P01715 115 aa7□□□□□ -1.29
SSBP1-212ENST00000489378 IGF1P05019 195 aa7□□□□□ -1.29
SSBP1-212ENST00000489378 PPIFP30405 207 aaKnown RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms