RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 IER3P46695 156 aa11.66□□□□□ -0.54
BRCA1-218ENST00000489037 OR3A4PP47883 348 aa11.66□□□□□ -0.54
BRCA1-218ENST00000489037 RPL15P61313 204 aaKnown RBP11.66□□□□□ -0.54
BRCA1-218ENST00000489037 RPS11P62280 158 aaKnown RBP eCLIP11.66□□□□□ -0.54
BRCA1-218ENST00000489037 SLC35A2P78381 396 aa11.66□□□□□ -0.54
BRCA1-218ENST00000489037 DOC2BQ14184 412 aa11.66□□□□□ -0.54
BRCA1-218ENST00000489037 GPR176Q14439 515 aa11.66□□□□□ -0.54
BRCA1-218ENST00000489037 IL13RA2Q14627 380 aa11.66□□□□□ -0.54
BRCA1-218ENST00000489037 AWAT1Q58HT5 328 aa11.66□□□□□ -0.54
BRCA1-218ENST00000489037 ASPHD2Q6ICH7 369 aa11.66□□□□□ -0.54
BRCA1-218ENST00000489037 CRIP3Q6Q6R5 217 aa11.66□□□□□ -0.54
BRCA1-218ENST00000489037 ASCL4Q6XD76 172 aa11.66□□□□□ -0.54
BRCA1-218ENST00000489037 GDPGP1Q6ZNW5 385 aa11.66□□□□□ -0.54
BRCA1-218ENST00000489037 JAGN1Q8N5M9 183 aa11.66□□□□□ -0.54
BRCA1-218ENST00000489037 TPRX1Q8N7U7 411 aa11.66□□□□□ -0.54
BRCA1-218ENST00000489037 DYRK2Q92630 601 aa11.66□□□□□ -0.54
BRCA1-218ENST00000489037 ORAI1Q96D31 301 aa11.66□□□□□ -0.54
BRCA1-218ENST00000489037 CNBD2Q96M20 576 aa11.66□□□□□ -0.54
BRCA1-218ENST00000489037 CHIAQ9BZP6 476 aa11.66□□□□□ -0.54
BRCA1-218ENST00000489037 PPA2Q9H2U2 334 aa11.66□□□□□ -0.54
BRCA1-218ENST00000489037 GAL3ST2Q9H3Q3 398 aa11.66□□□□□ -0.54
BRCA1-218ENST00000489037 ZNRD1Q9P1U0 126 aa11.66□□□□□ -0.54
BRCA1-218ENST00000489037 BLOC1S6Q9UL45 172 aa11.66□□□□□ -0.54
BRCA1-218ENST00000489037 RAB26Q9ULW5 256 aa11.66□□□□□ -0.54
BRCA1-218ENST00000489037 TRBV5-7A0A0A0MS05 114 aa11.65□□□□□ -0.54
BRCA1-218ENST00000489037 MEX3AA1L020 520 aaKnown RBP11.65□□□□□ -0.54
BRCA1-218ENST00000489037 MEGF11A6BM72 1044 aa11.65□□□□□ -0.54
BRCA1-218ENST00000489037 SLC33A1O00400 549 aaPredicted RBP11.65□□□□□ -0.54
BRCA1-218ENST00000489037 CDRT1O95170 752 aa11.65□□□□□ -0.54
BRCA1-218ENST00000489037 IGHV4-59P01825 116 aa11.65□□□□□ -0.54
BRCA1-218ENST00000489037 MAS1P04201 325 aa11.65□□□□□ -0.54
BRCA1-218ENST00000489037 CSN2P05814 226 aa11.65□□□□□ -0.54
BRCA1-218ENST00000489037 IGHV1-8P0DP01 117 aa11.65□□□□□ -0.54
BRCA1-218ENST00000489037 VHLP40337 213 aa11.65□□□□□ -0.54
BRCA1-218ENST00000489037 DLX6P56179 175 aa11.65□□□□□ -0.54
BRCA1-218ENST00000489037 AESQ08117 197 aa11.65□□□□□ -0.54
BRCA1-218ENST00000489037 PAN3Q58A45 887 aaKnown RBP11.65□□□□□ -0.54
BRCA1-218ENST00000489037 KRBOX4Q5JUW0 171 aa11.65□□□□□ -0.54
BRCA1-218ENST00000489037 RBM48Q5RL73 367 aaKnown RBP11.65□□□□□ -0.54
BRCA1-218ENST00000489037 HCP5Q6MZN7 132 aa11.65□□□□□ -0.54
BRCA1-218ENST00000489037 Q6P435 159 aa11.65□□□□□ -0.54
BRCA1-218ENST00000489037 CDH26Q8IXH8 852 aa11.65□□□□□ -0.54
BRCA1-218ENST00000489037 OSR2Q8N2R0 312 aa11.65□□□□□ -0.54
BRCA1-218ENST00000489037 C11orf42Q8N5U0 333 aa11.65□□□□□ -0.54
BRCA1-218ENST00000489037 BEND2Q8NDZ0 799 aa11.65□□□□□ -0.54
BRCA1-218ENST00000489037 OR51T1Q8NGJ9 327 aa11.65□□□□□ -0.54
BRCA1-218ENST00000489037 OR10K1Q8NGX5 313 aa11.65□□□□□ -0.54
BRCA1-218ENST00000489037 OR5R1Q8NH85 324 aa11.65□□□□□ -0.54
BRCA1-218ENST00000489037 UFD1Q92890 307 aa11.65□□□□□ -0.54
BRCA1-218ENST00000489037 DERL3Q96Q80 235 aa11.65□□□□□ -0.54
BRCA1-218ENST00000489037 BARHL1Q9BZE3 327 aa11.65□□□□□ -0.54
BRCA1-218ENST00000489037 Q9H521 79 aa11.65□□□□□ -0.54
BRCA1-218ENST00000489037 DUSP21Q9H596 190 aa11.65□□□□□ -0.54
BRCA1-218ENST00000489037 ING3Q9NXR8 418 aa11.65□□□□□ -0.54
BRCA1-218ENST00000489037 IL36GQ9NZH8 169 aa11.65□□□□□ -0.54
BRCA1-218ENST00000489037 ST3GAL6Q9Y274 331 aa11.65□□□□□ -0.54
BRCA1-218ENST00000489037 TRAV8-7A0A075B6U6 113 aa11.64□□□□□ -0.55
BRCA1-218ENST00000489037 A0A1B0GUS0 222 aa11.64□□□□□ -0.55
BRCA1-218ENST00000489037 ARG1P05089 322 aa11.64□□□□□ -0.55
BRCA1-218ENST00000489037 HSMCR30P0CW71 290 aa11.64□□□□□ -0.55
BRCA1-218ENST00000489037 SERPINA2P20848 420 aa11.64□□□□□ -0.55
BRCA1-218ENST00000489037 CFPP27918 469 aa11.64□□□□□ -0.55
BRCA1-218ENST00000489037 DYNC1I2Q13409 638 aaKnown RBP11.64□□□□□ -0.55
BRCA1-218ENST00000489037 GPR50Q13585 617 aa11.64□□□□□ -0.55
BRCA1-218ENST00000489037 ACSM3Q53FZ2 586 aa11.64□□□□□ -0.55
BRCA1-218ENST00000489037 OR52W1Q6IF63 320 aa11.64□□□□□ -0.55
BRCA1-218ENST00000489037 LINC00596Q86U02 117 aa11.64□□□□□ -0.55
BRCA1-218ENST00000489037 NKAIN3Q8N8D7 197 aa11.64□□□□□ -0.55
BRCA1-218ENST00000489037 Q8NFD4 153 aa11.64□□□□□ -0.55
BRCA1-218ENST00000489037 OR4F5Q8NH21 305 aa11.64□□□□□ -0.55
BRCA1-218ENST00000489037 OR5M11Q96RB7 305 aa11.64□□□□□ -0.55
BRCA1-218ENST00000489037 TMED9Q9BVK6 235 aa11.64□□□□□ -0.55
BRCA1-218ENST00000489037 TCF7L1Q9HCS4 588 aa11.64□□□□□ -0.55
BRCA1-218ENST00000489037 TAS2R3Q9NYW6 316 aa11.64□□□□□ -0.55
BRCA1-218ENST00000489037 OR6C3Q9NZP0 311 aa11.64□□□□□ -0.55
BRCA1-218ENST00000489037 TBL2Q9Y4P3 447 aaKnown RBP11.64□□□□□ -0.55
BRCA1-218ENST00000489037 SESN1Q9Y6P5 492 aa11.64□□□□□ -0.55
BRCA1-218ENST00000489037 ODAMA1E959 279 aa11.63□□□□□ -0.55
BRCA1-218ENST00000489037 POM121CA8CG34 1229 aa11.63□□□□□ -0.55
BRCA1-218ENST00000489037 HSPB6O14558 160 aa11.63□□□□□ -0.55
BRCA1-218ENST00000489037 GPR137BO60478 399 aa11.63□□□□□ -0.55
BRCA1-218ENST00000489037 CLPXO76031 633 aa11.63□□□□□ -0.55
BRCA1-218ENST00000489037 OR7C1O76099 320 aaPredicted RBP11.63□□□□□ -0.55
BRCA1-218ENST00000489037 GTF2F2P13984 249 aa11.63□□□□□ -0.55
BRCA1-218ENST00000489037 CRHBPP24387 322 aa11.63□□□□□ -0.55
BRCA1-218ENST00000489037 GLIPR1P48060 266 aa11.63□□□□□ -0.55
BRCA1-218ENST00000489037 KCNJ3P48549 501 aa11.63□□□□□ -0.55
BRCA1-218ENST00000489037 IRF3Q14653 427 aa11.63□□□□□ -0.55
BRCA1-218ENST00000489037 ATXN7L3Q14CW9 347 aaPredicted RBP11.63□□□□□ -0.55
BRCA1-218ENST00000489037 TRAM1Q15629 374 aa11.63□□□□□ -0.55
BRCA1-218ENST00000489037 PIGYQ3MUY2 71 aa11.63□□□□□ -0.55
BRCA1-218ENST00000489037 SLC22A6Q4U2R8 563 aa11.63□□□□□ -0.55
BRCA1-218ENST00000489037 PRSS48Q7RTY5 328 aa11.63□□□□□ -0.55
BRCA1-218ENST00000489037 ZNF565Q8N9K5 539 aa11.63□□□□□ -0.55
BRCA1-218ENST00000489037 OR4D6Q8NGJ1 314 aa11.63□□□□□ -0.55
BRCA1-218ENST00000489037 CORO2AQ92828 525 aa11.63□□□□□ -0.55
BRCA1-218ENST00000489037 MUL1Q969V5 352 aa11.63□□□□□ -0.55
BRCA1-218ENST00000489037 FOXRED1Q96CU9 486 aaPredicted RBP11.63□□□□□ -0.55
BRCA1-218ENST00000489037 NKX3-1Q99801 234 aaPredicted RBP11.63□□□□□ -0.55
BRCA1-218ENST00000489037 SSX3Q99909 188 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms