RNA–Protein interactions for RNA: ENST00000488896.1

PTPN4-212, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-212ENST00000488896 TMEM215Q68D42 235 aa1.23□□□□□ -2.21
PTPN4-212ENST00000488896 GLYATQ6IB77 296 aa1.23□□□□□ -2.21
PTPN4-212ENST00000488896 ERICH5Q6P6B1 374 aa1.23□□□□□ -2.21
PTPN4-212ENST00000488896 TPGS1Q6ZTW0 290 aa1.23□□□□□ -2.21
PTPN4-212ENST00000488896 CYP4Z1Q86W10 505 aa1.23□□□□□ -2.21
PTPN4-212ENST00000488896 FAM184AQ8NB25 1140 aa1.23□□□□□ -2.21
PTPN4-212ENST00000488896 MAL2Q969L2 176 aa1.23□□□□□ -2.21
PTPN4-212ENST00000488896 OR8B2Q96RD0 313 aa1.23□□□□□ -2.21
PTPN4-212ENST00000488896 GAL3ST2Q9H3Q3 398 aa1.23□□□□□ -2.21
PTPN4-212ENST00000488896 PRORYQ9H606 182 aa1.23□□□□□ -2.21
PTPN4-212ENST00000488896 TDRD3Q9H7E2 651 aaKnown RBP1.23□□□□□ -2.21
PTPN4-212ENST00000488896 RHOFQ9HBH0 211 aa1.23□□□□□ -2.21
PTPN4-212ENST00000488896 ANKHQ9HCJ1 492 aa1.23□□□□□ -2.21
PTPN4-212ENST00000488896 ACOT13Q9NPJ3 140 aa1.23□□□□□ -2.21
PTPN4-212ENST00000488896 SHANK3Q9BYB0 1731 aa1.23□□□□□ -2.21
PTPN4-212ENST00000488896 KIF27Q86VH2 1401 aa1.23□□□□□ -2.21
PTPN4-212ENST00000488896 A0A1B0GXF2 115 aa1.22□□□□□ -2.21
PTPN4-212ENST00000488896 UPK2O00526 184 aa1.22□□□□□ -2.21
PTPN4-212ENST00000488896 HLA-AP01891 365 aaKnown RBP1.22□□□□□ -2.21
PTPN4-212ENST00000488896 CRYGCP07315 174 aa1.22□□□□□ -2.21
PTPN4-212ENST00000488896 SOD3P08294 240 aa1.22□□□□□ -2.21
PTPN4-212ENST00000488896 CECR9P0C854 216 aa1.22□□□□□ -2.21
PTPN4-212ENST00000488896 MLNP12872 115 aa1.22□□□□□ -2.21
PTPN4-212ENST00000488896 GABRA1P14867 456 aa1.22□□□□□ -2.21
PTPN4-212ENST00000488896 ZNF22P17026 224 aaPredicted RBP1.22□□□□□ -2.21
PTPN4-212ENST00000488896 CPN2P22792 545 aa1.22□□□□□ -2.21
PTPN4-212ENST00000488896 CNTFRP26992 372 aa1.22□□□□□ -2.21
PTPN4-212ENST00000488896 ZNF140P52738 457 aaPredicted RBP1.22□□□□□ -2.21
PTPN4-212ENST00000488896 BNIP2Q12982 314 aa1.22□□□□□ -2.21
PTPN4-212ENST00000488896 FAM19A1Q7Z5A9 133 aa1.22□□□□□ -2.21
PTPN4-212ENST00000488896 ZNF738Q8NE65 137 aa1.22□□□□□ -2.21
PTPN4-212ENST00000488896 OR6K3Q8NGY3 331 aa1.22□□□□□ -2.21
PTPN4-212ENST00000488896 CLHC1Q8NHS4 586 aa1.22□□□□□ -2.21
PTPN4-212ENST00000488896 LMX1AQ8TE12 382 aa1.22□□□□□ -2.21
PTPN4-212ENST00000488896 TSSK6Q9BXA6 273 aa1.22□□□□□ -2.21
PTPN4-212ENST00000488896 PLEKHA1Q9HB21 404 aa1.22□□□□□ -2.21
PTPN4-212ENST00000488896 SLC22A14Q9Y267 594 aa1.22□□□□□ -2.21
PTPN4-212ENST00000488896 FADS3Q9Y5Q0 445 aa1.22□□□□□ -2.21
PTPN4-212ENST00000488896 AQRO60306 1485 aaKnown RBP eCLIP1.22□□□□□ -2.21
PTPN4-212ENST00000488896 NOS1P29475 1434 aa1.22□□□□□ -2.21
PTPN4-212ENST00000488896 KMT2BQ9UMN6 2715 aaPredicted RBP1.22□□□□□ -2.21
PTPN4-212ENST00000488896 CD300LBA8K4G0 201 aa1.21□□□□□ -2.22
PTPN4-212ENST00000488896 RFXANKO14593 260 aa1.21□□□□□ -2.22
PTPN4-212ENST00000488896 ENSAO43768 121 aaKnown RBP1.21□□□□□ -2.22
PTPN4-212ENST00000488896 CD8AP01732 235 aa1.21□□□□□ -2.22
PTPN4-212ENST00000488896 STAG3L2P0CL84 134 aa1.21□□□□□ -2.22
PTPN4-212ENST00000488896 S100A2P29034 98 aa1.21□□□□□ -2.22
PTPN4-212ENST00000488896 IL12BP29460 328 aa1.21□□□□□ -2.22
PTPN4-212ENST00000488896 ARR3P36575 388 aa1.21□□□□□ -2.22
PTPN4-212ENST00000488896 COILP38432 576 aaPredicted RBP1.21□□□□□ -2.22
PTPN4-212ENST00000488896 FOXF1Q12946 379 aa1.21□□□□□ -2.22
PTPN4-212ENST00000488896 GUSBP1Q15486 140 aa1.21□□□□□ -2.22
PTPN4-212ENST00000488896 NKAIN1Q4KMZ8 207 aa1.21□□□□□ -2.22
PTPN4-212ENST00000488896 HSP90AA4PQ58FG1 418 aa1.21□□□□□ -2.22
PTPN4-212ENST00000488896 C6orf183Q5T699 404 aa1.21□□□□□ -2.22
PTPN4-212ENST00000488896 LAIR2Q6ISS4 152 aa1.21□□□□□ -2.22
PTPN4-212ENST00000488896 LYZL2Q7Z4W2 148 aa1.21□□□□□ -2.22
PTPN4-212ENST00000488896 HS3ST5Q8IZT8 346 aa1.21□□□□□ -2.22
PTPN4-212ENST00000488896 BLNKQ8WV28 456 aa1.21□□□□□ -2.22
PTPN4-212ENST00000488896 TWIST2Q8WVJ9 160 aa1.21□□□□□ -2.22
PTPN4-212ENST00000488896 PYURFQ96I23 114 aa1.21□□□□□ -2.22
PTPN4-212ENST00000488896 LINC01587Q99440 93 aa1.21□□□□□ -2.22
PTPN4-212ENST00000488896 TXNDC17Q9BRA2 123 aa1.21□□□□□ -2.22
PTPN4-212ENST00000488896 ANAPC13Q9BS18 74 aa1.21□□□□□ -2.22
PTPN4-212ENST00000488896 ULBP1Q9BZM6 244 aa1.21□□□□□ -2.22
PTPN4-212ENST00000488896 OR2D2Q9H210 308 aa1.21□□□□□ -2.22
PTPN4-212ENST00000488896 WDR55Q9H6Y2 383 aaPredicted RBP1.21□□□□□ -2.22
PTPN4-212ENST00000488896 SDHAF2Q9NX18 166 aa1.21□□□□□ -2.22
PTPN4-212ENST00000488896 TRPM6Q9BX84 2022 aa1.21□□□□□ -2.22
PTPN4-212ENST00000488896 OTOFQ9HC10 1997 aa1.21□□□□□ -2.22
PTPN4-212ENST00000488896 ICE1Q9Y2F5 2266 aa1.2□□□□□ -2.22
PTPN4-212ENST00000488896 H3BP45 60 aa1.2□□□□□ -2.22
PTPN4-212ENST00000488896 CRTAPO75718 401 aaPredicted RBP1.2□□□□□ -2.22
PTPN4-212ENST00000488896 SC5DO75845 299 aa1.2□□□□□ -2.22
PTPN4-212ENST00000488896 PDYNP01213 254 aa1.2□□□□□ -2.22
PTPN4-212ENST00000488896 IGKV5-2P06315 115 aa1.2□□□□□ -2.22
PTPN4-212ENST00000488896 SCGB1C2P0DMR2 95 aa1.2□□□□□ -2.22
PTPN4-212ENST00000488896 PRTN3P24158 256 aa1.2□□□□□ -2.22
PTPN4-212ENST00000488896 XKP51811 444 aa1.2□□□□□ -2.22
PTPN4-212ENST00000488896 CASP8Q14790 479 aa1.2□□□□□ -2.22
PTPN4-212ENST00000488896 CST6Q15828 149 aa1.2□□□□□ -2.22
PTPN4-212ENST00000488896 RESP18Q5W5W9 173 aa1.2□□□□□ -2.22
PTPN4-212ENST00000488896 ELP2Q6IA86 826 aa1.2□□□□□ -2.22
PTPN4-212ENST00000488896 DRAXINQ8NBI3 349 aaPredicted RBP1.2□□□□□ -2.22
PTPN4-212ENST00000488896 OR8K1Q8NGG5 319 aa1.2□□□□□ -2.22
PTPN4-212ENST00000488896 OR52K1Q8NGK4 314 aa1.2□□□□□ -2.22
PTPN4-212ENST00000488896 OR13C9Q8NGT0 318 aa1.2□□□□□ -2.22
PTPN4-212ENST00000488896 OR51Q1Q8NH59 317 aa1.2□□□□□ -2.22
PTPN4-212ENST00000488896 SCGB1C1Q8TD33 95 aa1.2□□□□□ -2.22
PTPN4-212ENST00000488896 DOK4Q8TEW6 326 aa1.2□□□□□ -2.22
PTPN4-212ENST00000488896 VAT1Q99536 393 aa1.2□□□□□ -2.22
PTPN4-212ENST00000488896 TM6SF2Q9BZW4 377 aa1.2□□□□□ -2.22
PTPN4-212ENST00000488896 NXF2Q9GZY0 626 aaKnown RBP1.2□□□□□ -2.22
PTPN4-212ENST00000488896 STMN3Q9NZ72 180 aa1.2□□□□□ -2.22
PTPN4-212ENST00000488896 DNAJC27Q9NZQ0 273 aa1.2□□□□□ -2.22
PTPN4-212ENST00000488896 NAGKQ9UJ70 344 aa1.2□□□□□ -2.22
PTPN4-212ENST00000488896 C14orf166Q9Y224 244 aaKnown RBP1.2□□□□□ -2.22
PTPN4-212ENST00000488896 CHTOPQ9Y3Y2 248 aaKnown RBP1.2□□□□□ -2.22
PTPN4-212ENST00000488896 ATG2BQ96BY7 2078 aa1.2□□□□□ -2.22
PTPN4-212ENST00000488896 NRCAMQ92823 1304 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms